SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00828
Annotation
PREDICTED:_androgen-dependent_TFPI-regulating_protein-like_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 4.785
 

Sequence

CDS
ATGCCGTCACCAGCTGCCTACCGTGTGGGTGGCCACGTCGTTGCCCTCGGTCTGCACCTCACCAATACAGCCGTAATACTGGGTAACTTCAGCGAAGAGCTCCTGCGGACAGATCCTAACATCAGAAACCTTCATTTCATGCAGTTTAAATTTTTGACGACATGGAATATGGTCTTCCAATTGATGTACGCAACCCTGGGCTTAGTTTGCGATAGCCTTACTCTGCTAGGGAGAGATGACGTCACGCCGAAGACGGTCAGAAAGCTCAGGAATGCGATATTCGAATCGATTGTCTGTCCTTACTCATTGTTCATTGTAGGTATATTCTGGTCCTTATACAATTACAACAGGGATTGGTTGTACCCAGAATACATAGATAAAGTTGTGTCGTTTAATAGTAATTTGGTCATGCACTTTGCGATATTACCGGTCGTGCTCTGGGAGTTGAGCTTCCAGGAGAGGACCCGGCCGAAATCCGATAAAATGAGCCTTCAGGTCATAACGGCCCTGTATATCGTATACAATCTCGTGATATTATACACTTACTTCCAAAGGAATTTATGGCCGTATCCATTAATCTATCAAGTTTTCGGGACGGTACTGTACCCTATACTGGTAATGTTAATGTTAGCTCTGATTGTCCTAAGCTACTACGTACAATGGGAAATTCACGCGTGGATCTGGCGTCCCTTGAAAGTGACTCAGAAAAACAATTGA
Protein
MPSPAAYRVGGHVVALGLHLTNTAVILGNFSEELLRTDPNIRNLHFMQFKFLTTWNMVFQLMYATLGLVCDSLTLLGRDDVTPKTVRKLRNAIFESIVCPYSLFIVGIFWSLYNYNRDWLYPEYIDKVVSFNSNLVMHFAILPVVLWELSFQERTRPKSDKMSLQVITALYIVYNLVILYTYFQRNLWPYPLIYQVFGTVLYPILVMLMLALIVLSYYVQWEIHAWIWRPLKVTQKNN

Summary

Pfam
PF04750   Far-17a_AIG1
Interpro
IPR006838   Far-17a_AIG1       

Ontologies

Topology

Length:
238
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
125.37249
Exp number, first 60 AAs:
24.82241
Total prob of N-in:
0.76626
POSSIBLE N-term signal
sequence
inside
1  -  8
TMhelix
9  -  31
outside
32  -  50
TMhelix
51  -  70
inside
71  -  90
TMhelix
91  -  113
outside
114  -  127
TMhelix
128  -  150
inside
151  -  162
TMhelix
163  -  182
outside
183  -  196
TMhelix
197  -  219
inside
220  -  238
 
 

Population Genetic Test Statistics

Pi
280.041027
Theta
169.071406
Tajima's D
2.806398
CLR
0.481844
CSRT
0.969301534923254
Interpretation
Uncertain
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