SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00827
Pre Gene Modal
BGIBMGA009689
Annotation
PREDICTED:_androgen-dependent_TFPI-regulating_protein-like_[Bombyx_mori]
Full name
Androgen-dependent TFPI-regulating protein      
Alternative Name
Androgen-dependent-expressed protein FAR-17a
Location in the cell
PlasmaMembrane   Reliability : 4.51
 

Sequence

CDS
ATGCACATCAGTAATCTTCTTTACATACAGTACGCCATATTATCAGCTAATGTCAGCGAAGGGTCCATGGAGAATTTCGGAACAGGCACCTTCAAAAATATGGAGTATCGATATTTTACTACTTGGACCGCGGGTCTACAGATAGGATATGCGGCGCTAGGTACACTCTGCGATCTTCTGGTGCTGCTAAATAGACACAAAGAGAACTACAGATTACCTAAATATTTGGGTTCGTCGCGGGAAATTATATTCGCTGGTCTGGTCTGGCCGTCTAGTTGGGTAGTCTTCACTGTATTTTGGACTTTATTACACTACGACAGAAGCCTGATATTCCCAGCTTACTTGGACAAGATCATAACGCGTCTATCTAACCACGTCATACATACAATGATCGTTCCGGTCGTGGTCTGGGAGGTGATGTTTTGGCCCAGGAAACCGAAAAGTCACTACAGGAACATCGCGCAACTGGCGATACACATGTTGGCGTACATCTTCGTGTTACATTTCACTTATCACGAGCACGGCGTCTGGCTGTACCCGATCTTCAAAGCAGTTCAAGGAACGATACATTTCTATCTGCTCCACTTTTATGTCGCAGCTATGTGCTTGATGTTCTACAGGCTTCAGTGGTGGTTGAACTCTGTGATCCACGGCGTCGAAGACGTTGAGAAGATTCGCTTCATAGATTCAGCTGTAGGAAGATTCAGCTATAGGAAGTGGTTTACTTGGGCAATGTTACACGAGAGATCACAAAGCCGCATATAA
Protein
MHISNLLYIQYAILSANVSEGSMENFGTGTFKNMEYRYFTTWTAGLQIGYAALGTLCDLLVLLNRHKENYRLPKYLGSSREIIFAGLVWPSSWVVFTVFWTLLHYDRSLIFPAYLDKIITRLSNHVIHTMIVPVVVWEVMFWPRKPKSHYRNIAQLAIHMLAYIFVLHFTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYRLQWWLNSVIHGVEDVEKIRFIDSAVGRFSYRKWFTWAMLHERSQSRI

Summary

Description
Regulates the expression and the cell-associated anticoagulant activity of the inhibitor TFPI in endothelial cells (in vitro).
Miscellaneous
Expression was reduced after castration and reappeared after testosterone treatments.
Similarity
Belongs to the AIG1 family.
Keywords
Alternative splicing   Cell membrane   Complete proteome   Membrane   Polymorphism   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Androgen-dependent TFPI-regulating protein
splice variant  In isoform 2.
sequence variant  In dbSNP:rs2076185.
EMBL
BABH01017488    BABH01017486    BABH01017487    NWSH01008210    PCG62651.1    GAIX01006034    + More
JAA86526.1    KQ460890    KPJ10969.1    KQ459593    KPI96546.1    AGBW02009872    OWR49681.1    ODYU01008534    SOQ52219.1    PCG62652.1    KPI96547.1    AK401394    BAM18016.1    KPJ10970.1    GDQN01007452    JAT83602.1    ODYU01011594    SOQ57431.1    NWSH01003298    PCG66594.1    ACPB03005685    AQIB01159356    IACK01084098    LAA80299.1    IACJ01112898    LAA57005.1    NEVH01026389    PNF14352.1    AHZZ02024143    AEFK01063730    AEFK01063731    AEFK01063732    AEFK01063733    AEFK01063734    AEFK01063735    AQIA01052761    AQIA01052762    JSUE03030254    JSUE03030255    JU323455    AFE67211.1    CM001279    EHH52716.1    AFYH01049129    AFYH01049130    AFYH01049131    AFYH01049132    NDHI03003384    PNJ71145.1    CM001256    EHH17956.1    ABGA01392235    ABGA01392236    ABGA01392237    ABGA01392238    ABGA01392239    ABGA01392240    ABGA01392241    ABGA01392242    AAWZ02016749    AAWZ02016750    AAWZ02016751    AJFE02097058    AACZ04065924    NBAG03000244    PNI62836.1    AK313114    AK300919    AL022724    CH471087    BC007011    CABD030043317    CABD030043318    CABD030043319    GEDC01008352    JAS28946.1    GAMQ01004936    JAB36915.1    ADFV01015550    ADFV01015551    ADFV01015552    AANG04001101    M80427    KQ976419    KYM89277.1    KQ976885    KYN07518.1    KQ982335    KYQ57538.1    AK029025    AK135327    AC165263    BC027755    GEDC01024428    GEDC01024128    GEDC01022375    GEDC01018863    GEDC01018435    GEDC01006808    JAS12870.1    JAS13170.1    JAS14923.1    JAS18435.1    JAS18863.1    JAS30490.1    AKCR02000001    PKK34427.1    GBBI01004723    JAC13989.1    GEMB01000406    JAS02715.1    AGCU01199960    KK712361    KFQ34135.1    ABQF01024175    AEMK02000051   
Pfam
PF04750   Far-17a_AIG1
Interpro
IPR006838   Far-17a_AIG1       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
254
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
108.08508
Exp number, first 60 AAs:
21.10736
Total prob of N-in:
0.07792
POSSIBLE N-term signal
sequence
outside
1  -  40
TMhelix
41  -  63
inside
64  -  81
TMhelix
82  -  104
outside
105  -  118
TMhelix
119  -  141
inside
142  -  152
TMhelix
153  -  172
outside
173  -  186
TMhelix
187  -  206
inside
207  -  254
 
 

Population Genetic Test Statistics

Pi
214.88153
Theta
156.164502
Tajima's D
0.957294
CLR
0
CSRT
0.647717614119294
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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