Gene

KWMTBOMO00825

Annotation

unnamed_protein_product_[Bombyx_mori]

Location

Bomo_Chr2(+):3625977-3628423      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.478

CDS

ATGGAGTTATCTGCTGCAAGTCTCTTAACACAGCTTATGATACGTGTCTCGACTCAATTGTTGTCCCATATTACCATAAAGCAACACATATGCTGGTCAGACAGTACCATTGTCCTAGCATGGCTAAACACACTTCCTCATAGACTTCAGGTCTTTGAAGCTAACAGGGTTGCCAAGATAACATCCAATCCAATCACCTCCACATGGAAACATGTTCCTACAAACCTGAACCCTGCAGACTGTGCGAGCAGGGGAATGTCTGCCCAGTCACTATCAGCTCATGATCTTTGGTGGTCTCCTAGCTGGCTGAAGGAGCCTCCTGACACCTGGCCCAAAATGCCTCCTGCTCTAGGCCACCATGCATTACCAGGTCTGAAGCCCAAGAAAGTACCAGCTCATATAGCAGTTCCTGACCTCGACCTTGACTTGCTTACTCGATTCAGTTCTCTCGACAAGCTCATTGGAGTGACAGCTTGCATAAAACGCTTTATTTTCAATTGTAGACACAACTCAACTGATAGGTGCTCTGGTCCCTTGACAGTTGGAGAACGTAGAGATGCTCTGTTATTCTGGGTTCGCTCTGTTCAACACAATGAGTTTGCGGAAGAAATTTACCGTCTTCAGGCAGGCAAGATTTGTACCGTTCGACTTCAGCGTCTTTCACCCTTGATGAAAGATGATCTCTTGAGAGTTGGTGGTCGCCTCACTCATGCGCCAATAAGATACGATGCTCAGCATCCTCTCGTTCTGCCCAGCTCTAGCCCACTAGTTGATCTCATCATAGACCACTATCACAGAATAAACTGTCATCCTGGGGCTGACACATTACACGCTATCCTCCGTCAGCAGTTCTGGATACTCTCAGCACGTCGTGTCATCAGGCATCGCGTGTACAAATGCATTAGATGTTTCCGATATCGCGCTCAGGCCAGGGCTCCGTTGATGGCTGATTTGCCCGCAGACAGGGTCACACCCCAGCCACTCATCCAAGCTCTCTCTCAGCGTTTTTGGACTCTGTGGACCAAATCCTATCTCCATACCCTCCAAACCCGCTCCAAATGGCTTTCCACATCCTCACCTCCTCAAGTTGGAGAGCTCGTCCTCATCAAAGAGGACAATCAGCCCCCGCTGCAATGGAAACTTGGAAGGATTATCCGCACGTTACCCGGCAAGGATGGAGTGATCAGAGTCGTGGATTTGGACACGAAGCATGGAAGTCTGCGGAGACCTGTGTTCAAGTTAGCCAGGTTGCCGCTGGATTCAGCACATGAAGAAGTTCAGCCCCGGCCGCCCCAGGATGTATGA

Protein

MELSAASLLTQLMIRVSTQLLSHITIKQHICWSDSTIVLAWLNTLPHRLQVFEANRVAKITSNPITSTWKHVPTNLNPADCASRGMSAQSLSAHDLWWSPSWLKEPPDTWPKMPPALGHHALPGLKPKKVPAHIAVPDLDLDLLTRFSSLDKLIGVTACIKRFIFNCRHNSTDRCSGPLTVGERRDALLFWVRSVQHNEFAEEIYRLQAGKICTVRLQRLSPLMKDDLLRVGGRLTHAPIRYDAQHPLVLPSSSPLVDLIIDHYHRINCHPGADTLHAILRQQFWILSARRVIRHRVYKCIRCFRYRAQARAPLMADLPADRVTPQPLIQALSQRFWTLWTKSYLHTLQTRSKWLSTSSPPQVGELVLIKEDNQPPLQWKLGRIIRTLPGKDGVIRVVDLDTKHGSLRRPVFKLARLPLDSAHEEVQPRPPQDV

Uniprot

Q9TYB5   O77042   D7EKN1   A0A1B6LDH0   A0A1B6LL14   A0A1B6JE15   + More
A0A1B6MUZ9   A0A1B6KZV2   A0A1B6GMH9   A0A1S3DM66   V5GHM7   J9M1J7   A0A0A9XS77   A0A2S2N9D0   A0A0A9YU87   A0A0A9ZC74   J9JVD6   A0A1S3CUQ4   A0A3Q0IQQ3   A0A1B6MFR0   A0A0A9Z7S5   A0A0A9XKM2   A0A1S3DTZ4   A0A1B6KG61   A0A0A9XUK1   A0A0A9WP39   X1XMM8   A0A0A9X3X8   A0A0A9Z7Z7   X1XIA7   A0A146M0N4   X1XTX7   A0A146KW37   A0A2S2PM34   X1WY95   A0A146LZC3   A0A0A9Z001   J9KD60   A0A0K8SX96   A0A0J7KBZ0   A0A0A9VYL4   A0A0A9VSF7   A0A2S2PED9   A0A1S3DNP1   A0A0J7KCR4   A0A0J7K7S0   A0A3L8DF94   V5GH76   A0A2S2P963   A0A3Q0JP94   A0A1U8N896   A0A1S3DGE3   A0A0A9YNG0   A0A1S3DRF1   A0A0A9WJX2   A0A2G3AQ28   A0A1Y1KVX6   A0A2S2NCY5   A0A2G3AQC0   A0A1S3DM17   A0A146LEU7   A0A0A9YQQ8   A0A0J7JZS0   A0A0A9YJ91   J9L9H5   S4NIN9   A0A0L7KUL1   A0A0A9YU99   A0A3L8DEE4   A0A139W8E1   A0A3L8DZ23   X1WYQ8   X1WSS7   W8CCT3   A0A226CW75   A0A0A9XX98   A0A0C9QLM0   X1X412   A0A0J7ND98   A0A1S4EIX5   A0A023EYQ7   A0A1Y1LIG5   A0A226DMG9   A0A023EYA4   A0A226CWA5   A0A1S3DIZ2   A0A226E226   A0A0A9WXF2   A0A0A9VUR1   A0A1S3DJC0   A0A1S3DJJ0   A0A1S3DJ34   A0A1Y1KMX0   A0A0A9X6H9   A0A0J7N2B8   A0A087T9T6   A0A0K8T5S0   A0A146LBU6   A0A0J7KNK6  

Pubmed

9880922    18362917    19820115    25401762    26823975    30249741    + More
25893780    29089032    28004739    23622113    26227816    24495485    25474469   

EMBL

AB012907    BAA33577.1    AB012906    BAA33576.1    DS497760    EFA13221.1    + More
GEBQ01018232    JAT21745.1    GEBQ01015599    JAT24378.1    GECU01010337    JAS97369.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    GECZ01006169    JAS63600.1    GALX01004947    JAB63519.1    ABLF02052963    GBHO01021103    GBHO01021101    JAG22501.1    JAG22503.1    GGMR01000737    MBY13356.1    GBHO01008418    GBHO01008416    JAG35186.1    JAG35188.1    GBHO01004194    JAG39410.1    ABLF02008594    GEBQ01005223    JAT34754.1    GBHO01004196    JAG39408.1    GBHO01023090    JAG20514.1    GEBQ01029803    JAT10174.1    GBHO01019177    GBHO01003185    JAG24427.1    JAG40419.1    GBHO01034065    GBHO01034061    JAG09539.1    JAG09543.1    ABLF02017373    GBHO01030122    GBHO01030121    GBHO01030120    GBHO01030116    JAG13482.1    JAG13483.1    JAG13484.1    JAG13488.1    GBHO01003578    JAG40026.1    ABLF02035110    ABLF02067347    GDHC01006469    JAQ12160.1    ABLF02006304    ABLF02036268    GDHC01018560    JAQ00069.1    GGMR01017890    MBY30509.1    ABLF02030854    GDHC01006567    JAQ12062.1    GBHO01006408    JAG37196.1    ABLF02041863    GBRD01007977    JAG57844.1    LBMM01009964    KMQ87756.1    GBHO01044316    JAF99287.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    GGMR01015135    MBY27754.1    LBMM01009551    KMQ88039.1    LBMM01012392    KMQ86241.1    QOIP01000009    RLU19130.1    GALX01005107    JAB63359.1    GGMR01013370    MBY25989.1    GBHO01027036    GBHO01010996    GBHO01010995    GBHO01010993    GBHO01010991    JAG16568.1    JAG32608.1    JAG32609.1    JAG32611.1    JAG32613.1    GBHO01038469    JAG05135.1    MCIT02012214    PHT96336.1    GEZM01072348    JAV65549.1    GGMR01002421    MBY15040.1    MCIT02006707    PHT96417.1    GDHC01011948    JAQ06681.1    GBHO01009080    JAG34524.1    LBMM01018894    KMQ83668.1    GBHO01010487    GBHO01010485    JAG33117.1    JAG33119.1    ABLF02008636    ABLF02065931    GAIX01013989    JAA78571.1    JTDY01005490    KOB66948.1    GBHO01010489    GBHO01010484    JAG33115.1    JAG33120.1    RLU18850.1    KQ973442    KXZ75531.1    QOIP01000002    RLU25473.1    ABLF02028666    ABLF02066713    ABLF02017056    GAMC01003146    JAC03410.1    LNIX01000063    OXA37199.1    GBHO01019080    JAG24524.1    GBYB01004444    JAG74211.1    ABLF02008635    ABLF02023121    ABLF02065930    LBMM01006539    KMQ90520.1    GBBI01004409    JAC14303.1    GEZM01054765    JAV73413.1    LNIX01000016    OXA46198.1    GBBI01004407    JAC14305.1    LNIX01000069    OXA36894.1    LNIX01000007    OXA51795.1    GBHO01034064    JAG09540.1    GBHO01045636    GBHO01045635    JAF97967.1    JAF97968.1    GEZM01085145    GEZM01085143    JAV60187.1    GBHO01027267    JAG16337.1    LBMM01011492    KMQ86800.1    KK114194    KFM61875.1    GBRD01004944    GBRD01004943    GBRD01004942    JAG60878.1    GDHC01014057    JAQ04572.1    LBMM01005079    KMQ91831.1   

Proteomes

UP000007266    UP000079169    UP000007819    UP000036403    UP000279307    UP000189702    + More
UP000224522    UP000037510    UP000198287    UP000054359   

PRIDE

Q9TYB5    O77042   

Pfam

PF17921   Integrase_H2C2        + More
PF05380   Peptidase_A17
PF18701   DUF5641
PF00665   rve
PF03564   DUF1759
PF05585   DUF1758
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH

Interpro

IPR008042   Retrotrans_Pao        + More
IPR041588   Integrase_H2C2       
IPR040676   DUF5641       
IPR036397   RNaseH_sf       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR000477   RT_dom       
IPR001878   Znf_CCHC       
IPR041373   RT_RNaseH       
IPR041577   RT_RNaseH_2       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

Q9TYB5   O77042   D7EKN1   A0A1B6LDH0   A0A1B6LL14   A0A1B6JE15   + More
A0A1B6MUZ9   A0A1B6KZV2   A0A1B6GMH9   A0A1S3DM66   V5GHM7   J9M1J7   A0A0A9XS77   A0A2S2N9D0   A0A0A9YU87   A0A0A9ZC74   J9JVD6   A0A1S3CUQ4   A0A3Q0IQQ3   A0A1B6MFR0   A0A0A9Z7S5   A0A0A9XKM2   A0A1S3DTZ4   A0A1B6KG61   A0A0A9XUK1   A0A0A9WP39   X1XMM8   A0A0A9X3X8   A0A0A9Z7Z7   X1XIA7   A0A146M0N4   X1XTX7   A0A146KW37   A0A2S2PM34   X1WY95   A0A146LZC3   A0A0A9Z001   J9KD60   A0A0K8SX96   A0A0J7KBZ0   A0A0A9VYL4   A0A0A9VSF7   A0A2S2PED9   A0A1S3DNP1   A0A0J7KCR4   A0A0J7K7S0   A0A3L8DF94   V5GH76   A0A2S2P963   A0A3Q0JP94   A0A1U8N896   A0A1S3DGE3   A0A0A9YNG0   A0A1S3DRF1   A0A0A9WJX2   A0A2G3AQ28   A0A1Y1KVX6   A0A2S2NCY5   A0A2G3AQC0   A0A1S3DM17   A0A146LEU7   A0A0A9YQQ8   A0A0J7JZS0   A0A0A9YJ91   J9L9H5   S4NIN9   A0A0L7KUL1   A0A0A9YU99   A0A3L8DEE4   A0A139W8E1   A0A3L8DZ23   X1WYQ8   X1WSS7   W8CCT3   A0A226CW75   A0A0A9XX98   A0A0C9QLM0   X1X412   A0A0J7ND98   A0A1S4EIX5   A0A023EYQ7   A0A1Y1LIG5   A0A226DMG9   A0A023EYA4   A0A226CWA5   A0A1S3DIZ2   A0A226E226   A0A0A9WXF2   A0A0A9VUR1   A0A1S3DJC0   A0A1S3DJJ0   A0A1S3DJ34   A0A1Y1KMX0   A0A0A9X6H9   A0A0J7N2B8   A0A087T9T6   A0A0K8T5S0   A0A146LBU6   A0A0J7KNK6  

KEGG

101737233    no KO assigned | (RefSeq) int; uncharacterized LOC101737233

GO

GO:0003676   GO:0015074   GO:0016021   GO:0004190   GO:0008270  

Length:

434

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01741

Exp number, first 60 AAs:

0.01699

Total prob of N-in:

0.00180

outside

1  -  434

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0.038021

CSRT

0

Interpretation

Uncertain