Gene

KWMTBOMO00824

Pre Gene Modal

BGIBMGA009744

Annotation

PREDICTED:_decaprenyl-diphosphate_synthase_subunit_2-like_[Amyelois_transitella]

Location

Bomo_Chr2(+):3613987-3618745      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.428

CDS

ATGGCCGTCTCGTATGCAGTTTCGCGCGTTTTGAGACGCGCCTCACCGATTTTCGTGCAGAAACGACACGAATCGACAATGGCCAGTTTCACGAAAGACGAAATAATGATTTTACTTAGACCCCCGTTCTCGAATTGGAGCAACGCCATCAGGGACGCCGAGAAAGTGGTCGGCTATCCAACGTCTTTTATGAATCTTAGATGCCTACTGAGTGACGAATTCGCTAACCTAGCTCTGTATTTGAGGAAGCTGGTCGGCAGCAATCATCTGGTGATGCAAACCGCAAAAAACGTCCTGTACGGCGACTCTAAGAACTTGCAGCCGTGGGGCCTGATCATCCTCTTACTGGCCAAATCGATCAGGGCCCAGTCCAAGAAAGCTGAAGAACAGACGAGAGTACTGGCTGAGCTGACGGAGATGATACGAACCGGCCACTTGATACACAAGGGCATCATCAATGTCCCTTTCGCGAAACGTTCAAAAGACACTGAAACTGCGATATTCGGCAATAAAATCGCTATACTTCTCGGCGACTATCTACTTGTGACCGCCAACGCTATGTTAGCAGAGCTGAGGAACTCCGACGTTTCTTATATAATATCTACAGCGCTTAAAGATCTCTCGGAAGGAGAATTCTTCGGCGAAAGGGACGAACAGAACATGCCGTTGCCGGGAAGACCTAAAACGCACGACGGCTTGGAGATAAACTTTGACACGGACTCCATTACGGTCGACGAGGTATTAGGAAAGTCCCGAAAGGAATGGACGGCTAGGACAGTCTACAATGGAGTCAGCCTTTTAGGTAGGGGCTGCCAATCGGCCATGGTCCTTGACAAACAAGGGCGTGACATCCAAAAGTATGCTTACCATTTCGGTTGCCACGTGGGTCTGGCCTGGCAGGCCGCTACGGAACTCCAGAAATTGACCTCCGATTCCAGAGGTCACTTCTGTCTGGCAAGCGCTCCGGTTCTTTTCGCCTTAGAAATGAATCCGGATCTGTACAAAATCATTGATCAAGCGAAAAACGACGTTAAAGACGTCGATTACGAAGATTTGAAGTTCAATATCCTGAAAACGGACGCGGTCGACAAAACTAAAATGCTATACGAGGATCACGCGAAAAAAGCCACCGCTTACATAGAGAACATAGGACAGAACGAATCTGTAGATATGATAAAGAAATTGATTAACACATTCTGA

Protein

MAVSYAVSRVLRRASPIFVQKRHESTMASFTKDEIMILLRPPFSNWSNAIRDAEKVVGYPTSFMNLRCLLSDEFANLALYLRKLVGSNHLVMQTAKNVLYGDSKNLQPWGLIILLLAKSIRAQSKKAEEQTRVLAELTEMIRTGHLIHKGIINVPFAKRSKDTETAIFGNKIAILLGDYLLVTANAMLAELRNSDVSYIISTALKDLSEGEFFGERDEQNMPLPGRPKTHDGLEINFDTDSITVDEVLGKSRKEWTARTVYNGVSLLGRGCQSAMVLDKQGRDIQKYAYHFGCHVGLAWQAATELQKLTSDSRGHFCLASAPVLFALEMNPDLYKIIDQAKNDVKDVDYEDLKFNILKTDAVDKTKMLYEDHAKKATAYIENIGQNESVDMIKKLINTF

Similarity

Belongs to the FPP/GGPP synthase family.

Uniprot

H9JJP3   A0A2A4JHW0   A0A194QZK0   A0A194PZG1   A0A212FJR8   A0A2H1VTN4   + More
A0A0L7K2E9   A0A0L7LDG1   A0A0L7KMD7   A0A2W1BIH8   A0A2H1X1J2   A0A2A4JP78   A0A0L7KNY9   A0A194PFE8   H9IU22   A0A194RHT9   A0A212F6G3   A0A336K210   B4KWM6   A0A194RB96   A0A2A4J107   B0XA19   Q2M160   A0A0M4EDE5   A0A212FDL4   W8CD48   B4N3V4   N6SVZ1   B3NIU9   A0A1W4WH88   A0A194Q7W4   A0A182QCJ3   A0A3B0JW05   B4J083   B4GUL6   B3M6U9   B4IUK0   A0A034WM77   A0A0J9UQK4   B4QJL9   Q9VP87   B4IAI9   A0A2M4AET4   B4PE82   A0A0A1XPK4   B0XA20   A0A139WI32   A0A084W0S6   A0A2M4AER4   A0A0K8VCT6   A0A1Q3FCN9   B0XA18   A0A1Y1N0V5   A0A182GYG7   A0A1W4V9U8   A0A1S4EZP8   A0A1Y9HEW6   A0A182GYG6   B4LHG4   A0A1A9UJ74   W5JCC3   Q17KC2   A0A1A9X0N0   A0A182ML90   A0A0L0CNU2   A0A2M4BPK6   Q17KC4   T1PC98   A0A1S4EZP3   A0A1A9XJI0   A0A1B0AY55   A0A1I8NIU7   A0A182K9F5   A0A0T6B5I1   A0A2M4BP46   A0A182NIH7   A0A1B0A6K5   A0A2M4BP09   A0A2M4BN91   A0A2M4BN23   A0A1B0CLL9   A0A1Y9HEM7   A0A084W0S5   A0A1I8PKI1   Q17KC3   A0A182FCQ0   A0A182WKK0   A0A2H8TCK0   V5UUA7   A0A182P5L9   A0A182YCX5   A0A2S2QGI7   J9K7E9   A0A182TB49   A0A336LS10   A0A182X769   A0A182UCG9   A7UU03   A0A182MCF6   A0A2S2P200  

Pubmed

19121390    26354079    22118469    26227816    28756777    17994087    + More
15632085    24495485    23537049    17550304    25348373    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    18362917    19820115    24438588    28004739    26483478    20920257    23761445    17510324    26108605    25315136    25244985    12364791    14747013    17210077   

EMBL

BABH01017483    BABH01017484    NWSH01001509    PCG71023.1    KQ460890    KPJ10968.1    + More
KQ459593    KPI96545.1    AGBW02008218    OWR53997.1    ODYU01004381    SOQ44201.1    JTDY01014553    KOB52020.1    JTDY01001588    KOB73445.1    JTDY01008638    KOB64467.1    KZ150023    PZC74869.1    ODYU01012287    SOQ58514.1    NWSH01000929    PCG73508.1    JTDY01008044    KOB64781.1    KQ459604    KPI92091.1    BABH01034256    KQ460205    KPJ17004.1    AGBW02010046    OWR49299.1    UFQS01000067    UFQT01000067    SSW98956.1    SSX19338.1    CH933809    EDW17473.1    KQ460416    KPJ14892.1    NWSH01004165    PCG65416.1    DS232561    EDS43445.1    CH379069    EAL30715.1    CP012525    ALC43608.1    AGBW02009028    OWR51824.1    GAMC01002571    JAC03985.1    CH964095    EDW79309.2    APGK01054216    APGK01054217    APGK01054218    KB741248    KB631854    ENN71929.1    ERL86744.1    CH954178    EDV52595.1    KQ459324    KPJ01613.1    AXCN02000482    OUUW01000002    SPP76901.1    CH916366    EDV95684.1    CH479191    EDW26299.1    CH902618    EDV39785.1    CH891933    EDX00064.1    GAKP01003492    GAKP01003490    JAC55462.1    CM002912    KMZ00916.1    CM000363    EDX11319.1    AE014296    AY051597    AAF51668.1    AAK93021.1    CH480826    EDW44302.1    GGFK01005952    MBW39273.1    CM000159    EDW95095.1    GBXI01016343    GBXI01001023    JAC97948.1    JAD13269.1    EDS43446.1    KQ971343    KYB27485.1    ATLV01019157    KE525263    KFB43820.1    GGFK01005960    MBW39281.1    GDHF01015616    JAI36698.1    GFDL01009756    JAV25289.1    EDS43444.1    GEZM01016911    JAV91048.1    JXUM01021119    JXUM01021120    JXUM01021121    KQ560591    KXJ81758.1    KXJ81757.1    CH940647    EDW68494.1    ADMH02001837    ETN60973.1    CH477226    EAT47125.1    AXCM01006428    JRES01000128    KNC33931.1    GGFJ01005859    MBW55000.1    EAT47123.1    KA646386    AFP61015.1    JXJN01005555    LJIG01009653    KRT82650.1    GGFJ01005580    MBW54721.1    GGFJ01005644    MBW54785.1    GGFJ01005270    MBW54411.1    GGFJ01005271    MBW54412.1    AJWK01017431    KFB43819.1    EAT47124.1    GFXV01000039    MBW11844.1    KF673862    AHB81558.1    GGMS01007608    MBY76811.1    ABLF02016144    SSX19359.1    AAAB01008960    EDO63779.1    GGMR01010785    MBY23404.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000009192    UP000002320    UP000001819    UP000092553    UP000007798    UP000019118    UP000030742    UP000008711    UP000192223    UP000075886    UP000268350    UP000001070    UP000008744    UP000007801    UP000002282    UP000000304    UP000000803    UP000001292    UP000007266    UP000030765    UP000069940    UP000249989    UP000192221    UP000075900    UP000008792    UP000078200    UP000000673    UP000008820    UP000091820    UP000075883    UP000037069    UP000095301    UP000092443    UP000092460    UP000075881    UP000075884    UP000092445    UP000092461    UP000095300    UP000069272    UP000075920    UP000075885    UP000076408    UP000007819    UP000075901    UP000076407    UP000075902    UP000007062   

PRIDE

H9JJP3    H9IU22    Q9VP87   

Pfam

PF00348   polyprenyl_synt

Interpro

IPR008949   Isoprenoid_synthase_dom_sf        + More
IPR000092   Polyprenyl_synt       
IPR000595   cNMP-bd_dom       

SUPFAM

SSF48576   SSF48576       

Gene 3D

1.10.600.10    

ProteinModelPortal

H9JJP3   A0A2A4JHW0   A0A194QZK0   A0A194PZG1   A0A212FJR8   A0A2H1VTN4   + More
A0A0L7K2E9   A0A0L7LDG1   A0A0L7KMD7   A0A2W1BIH8   A0A2H1X1J2   A0A2A4JP78   A0A0L7KNY9   A0A194PFE8   H9IU22   A0A194RHT9   A0A212F6G3   A0A336K210   B4KWM6   A0A194RB96   A0A2A4J107   B0XA19   Q2M160   A0A0M4EDE5   A0A212FDL4   W8CD48   B4N3V4   N6SVZ1   B3NIU9   A0A1W4WH88   A0A194Q7W4   A0A182QCJ3   A0A3B0JW05   B4J083   B4GUL6   B3M6U9   B4IUK0   A0A034WM77   A0A0J9UQK4   B4QJL9   Q9VP87   B4IAI9   A0A2M4AET4   B4PE82   A0A0A1XPK4   B0XA20   A0A139WI32   A0A084W0S6   A0A2M4AER4   A0A0K8VCT6   A0A1Q3FCN9   B0XA18   A0A1Y1N0V5   A0A182GYG7   A0A1W4V9U8   A0A1S4EZP8   A0A1Y9HEW6   A0A182GYG6   B4LHG4   A0A1A9UJ74   W5JCC3   Q17KC2   A0A1A9X0N0   A0A182ML90   A0A0L0CNU2   A0A2M4BPK6   Q17KC4   T1PC98   A0A1S4EZP3   A0A1A9XJI0   A0A1B0AY55   A0A1I8NIU7   A0A182K9F5   A0A0T6B5I1   A0A2M4BP46   A0A182NIH7   A0A1B0A6K5   A0A2M4BP09   A0A2M4BN91   A0A2M4BN23   A0A1B0CLL9   A0A1Y9HEM7   A0A084W0S5   A0A1I8PKI1   Q17KC3   A0A182FCQ0   A0A182WKK0   A0A2H8TCK0   V5UUA7   A0A182P5L9   A0A182YCX5   A0A2S2QGI7   J9K7E9   A0A182TB49   A0A336LS10   A0A182X769   A0A182UCG9   A7UU03   A0A182MCF6   A0A2S2P200  

PDB

3AQ0     E-value=9.28852e-22,     Score=256

KEGG

101745114    K12505 decaprenyl-diphosphate synthase subunit 2 [EC:2.5.1.91] | (RefSeq) decaprenyl-diphosphate syn

PATHWAY

00900    Terpenoid backbone biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0016740   GO:0008299   GO:1990234   GO:0016831   GO:0003824   GO:0019752   GO:0030170   GO:0016020   GO:0004675   GO:0006559   GO:0004887   GO:0016021  

Length:

399

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.06875000000001

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.10650

outside

1  -  399

 

 

Pi

153.533565

Theta

131.940893

Tajima's D

0.549576

CLR

0.304226

CSRT

0.530023498825059

Interpretation

Uncertain