SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00820
Pre Gene Modal
BGIBMGA009742
Annotation
PREDICTED:_uncharacterized_protein_LOC105842585_[Bombyx_mori]
Location
Bomo_Chr2(+):3461947-3475817      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.329
 

Sequence

CDS
ATGAACAGATTGGACCCCTCGTTCCGAGGCAAAAGCCTCTGCGAGCTCATGACAAAACCGATAGAAGCTTTCGATCTCCGAAGAGACTTCGCTGAAGACAAAGACTATGATTTTTACGAAAGCGACCGGAATAGTTTGGAGCCTTATTGCCCTGATAGTCTGCGCGGGCAAGGATTGCTGCATTCTGGTTATCTGACCACTCAGAATCGGGCCGAAGACAGATGGGGTGGAGGATACGTCGGTTCTTATGGACAGAGAAAACATGATGATACGAACTTCATTCCTTATCAGATTGGTATAAGAAGGAAGAACGATCCCAGAGAACACGAGAACTGGGGACAATATGGAGGCTATTATGGGGGCTACGACTATTACAAGGACAGAAACGACTACTACAAATCGCAGAGCCATTGGAACTTAAACAACGCGATCGACAGAGCCTACAGCTCTGAGGGAGTCAGGCCATTGACTACCATCATCAGGCCCCATAAATCGATGGCGGATTTCGACTATAACAAACTAGCGAAGGATACCCCGTGGAACGAAAGATACGGGTCTTGGAAAAGAGAGAAATGGAACAGCTCAGGATCGTCATTTAATAGCTTCGATTACGGGGGCTACCATCATTACGGACCCACGTTTGAGCTGGAAGGCAGAAGCGACGAAAATGATCCGAAAGATTGCTCGTCTCGGAGAAGCGCCGGTATGTCTCTGAGTAGTGGTTCGATAAGGAGGTCGTTGTACGCCAAGAATGTGGTGGAATGCGAGGCATCGTGCTTTGAGGAGAGGGAGTTTAAATGCGTCTCCTACAGCTACAGATACTCAAATTCGCGCGGCTCCGACAACTGCTTTTTGAGCGAAAGGCCGTACAGAGGCTTGGAGATGTCCGCGGACAGCAGCTCCGATGTGTACGCGATGCCACAAAGCCACGACTGTGTCAACGTAAATTATGACCCTTGGGTTGAAAGTGAGTGCTTCTGGCATGTGAGGTCTGGAGCTGCGGTCACCGGGGCCGCAGTGAGGGCCGCCCTCACCGTGGCCGGTCTGGGAGCGTGCGAGGCGGAGTGCATTCGGGCCTCCGGGTTTTTCTGCAGAGGTTTTAGTTTCAGGTTCGAGGCCCCGATTACAGGAGAGGACTTAGAGAACTGTATCCTGACTTCGTCCCCTCCCGCCTCGCTGCCCCCAAGCCGTGCGGCCCACCACGAGCTGTACGCGCGGGGGCGCGCGGGGCGGGGCTGCCAGCCCGCGCTGCACGACGCCCACCCCGAGCCCGGGACACAATGCTACCTCCAGTACGACAGCGCGGCTCAGCTATCCCCCTCGGCCGTGCGGGGGCGCGCGAGGGTCCGGGACGAGGGGGCGTGCGGGGTGGCGTGCACCGACGCGCCCTTCCGGTGCCTGAGCTACTCCTTCAAAAATAACGCACCACCGGACCGCGATAACTGCTTCCTCTCCGAGATAAGACTGTTCGATCTTCAAAGGGGAGTGGACTACGTACATTCCACTGACGACTGGCTCTTCGCTTTCGATCTATTCAACGGGCAGTGCTGGAGGAAGATCCACGGACCGGATTATGATGAGCCTACACACGAACTTCCGAGACCGATCCTGACATCTGGTTCTGAAGAGTCCTTCCCAGTGTCAGGTCCCTCTGGTCCTGGTTACTCTGAATCAGATCCTCCTTACATATCTGAAGGACACATAAAGCCGTTTAAACCAACAATATACAAACCGATATATCCTGAACCAAACGGTCCCGATTTCGAACCACATTACGAAACTAGTGGACATTTTTATAAACCAACGTATTCTATTGAACCAAGTGGACCTTACAAACCGGGTTTTGCTGAACCAAGTGGTCCAGATTTCAAACCACATTTCGAACCAGTTGGGCCGGTACTCAAACCGGTATACCCTTTAAACGAACCTCCATTTGAATCCACCAGGCCCGGTCTTAAACCTCTCTATCCGGTGCAGCCAAATTTCAAACCGCGTCCGGTCGAACCTAGTGTCTATAGACCCGAGTATCCGGTTCAGAAACCAGGATACGTGCCCAAACCGGCGTACCGACCTCCAGAACACGATAGACCCTTTGTCCCTACCAGTCCACCCGGGTACCGACCTGGACGACCTGGGTTCAATCCTGGCTCAAAACCGGGCTTTGAAGGAGACAGGGAAGATGGAATTGCCGTATCTTGGCGCCACTACACGGTGTCCGGGTTCCCCTGCCGAGCGGGGACTTCCTGCGCGCAGAACCACGTCGCCGGCCACTGGGCTTGCGAACCGGAGGGTGGAGAAATCGGATCGTGGGATTACTGCTGTGCGCCAACGCATCGCTGTGGGTACAGCGAAGGTTTCAATAAACCCTGGTGCTACGTGGGCCCAGAGAGCGACCAATGGCGCCCGTGTAGTGAAAAATACTACCCTTACCATCAACACAACGTGCCGCATCCCTCTCAAGCAAACAGAGATGAAACCTCTCGACCTTCGGGTTCGAGCCATCCACACACAAATAGACCTGGTCCGTACCTATCTGAAGCTGATAGAAGATACTGGGATGAATTATACAAAAACGGTCCTCAGGCGTATTACGATAGATACGGGAATCCCTTACCAGGGTATACAAGAGTACCGACATCAGATCCGCCGCATATAAAACCAGAATATTCTCGACCTGCTTCCGGATCCTGGGCGCCAGCACAGGGAGGAGGTACGCGTGATGGACTCGGTGTGCCGAGGTACTGGCCGGTGGCCTACCTACACAAAGGTCCTCCACCAAACATGACTTATTTTAGATACAACGAAACGACAACTACTGAAATGCCAAAACCCGCGGAATCCAGAGACCTACCAGACGATAGGGACTCGCCAGATCAACAGACACTTATCGACAAACCAAAAATCATCGACAACCATAGAGGCGAGAAGAAACGTAATATTAGCGATCATGACGAAGAACTTCATATCGACATCGACAAAACGACAACAGCTAAAACTGTTAGCGAAGTCACTGAGATTATTGAAAGAGTAAATAAGAGCGAGACAGAAAGCACAACTTCTGACAAGGACGTAGATAAAATGGATCTTATCGATGGAATTGATGATAAACTATTAGATTTCTCTAAGTCTATTGAAGTATTTGATATAGAAGACGCTAAGAAGAGTGCGAAGGCAGATCTTAAAACTCTACGAGCGGAAGAGAGACAGATAGAAGAAATAGGACGACTGTTGGCTTCAAGGCGCGACGGGAAAGTTGTCTTGGAAAAGCGATCGCAGAAAGAATTGGCCTCAAAGAATATTGCGGTCGACGAAGATTTGCTGGACTTCAATTTCGGGAATAAATTCCCAGTAGAAAGGAGAGGAGTCGTACGGAAAGTGACAAAAGACGAAATAGAGAGGGACAGGAATACCGATAGAAGCCTAGAAGTGAGCGAGACAACGTTCGTTAGACCACCAAGAGTACTAGCTACAACTGAAAACATACGCAAAGCAATTGTCAACGGTAAAATATTTTATGACGCCACAATCAGAGAGCAGAGAGATGTGCTAACGAATGCCACTCGAAGATCCAAATCTCTGAGGCCTCTGGAAGACAGAGCCCCATCAGTGATTAATTCTGCTAATTTCGGAAAGAAGAAAATTATAAAAACTAGAAACGTAAATCCTGTGAGGAGAGTCAGAAGAGTTTACAGGAAAAGATATAACCCGGAGGAAGTTAGAAGGAGACTGTTGGAGAGAGATAGAGCTAAAGAGAGTTCTGTTGATAGCAGTAGGAAAATTTAA
Protein
MNRLDPSFRGKSLCELMTKPIEAFDLRRDFAEDKDYDFYESDRNSLEPYCPDSLRGQGLLHSGYLTTQNRAEDRWGGGYVGSYGQRKHDDTNFIPYQIGIRRKNDPREHENWGQYGGYYGGYDYYKDRNDYYKSQSHWNLNNAIDRAYSSEGVRPLTTIIRPHKSMADFDYNKLAKDTPWNERYGSWKREKWNSSGSSFNSFDYGGYHHYGPTFELEGRSDENDPKDCSSRRSAGMSLSSGSIRRSLYAKNVVECEASCFEEREFKCVSYSYRYSNSRGSDNCFLSERPYRGLEMSADSSSDVYAMPQSHDCVNVNYDPWVESECFWHVRSGAAVTGAAVRAALTVAGLGACEAECIRASGFFCRGFSFRFEAPITGEDLENCILTSSPPASLPPSRAAHHELYARGRAGRGCQPALHDAHPEPGTQCYLQYDSAAQLSPSAVRGRARVRDEGACGVACTDAPFRCLSYSFKNNAPPDRDNCFLSEIRLFDLQRGVDYVHSTDDWLFAFDLFNGQCWRKIHGPDYDEPTHELPRPILTSGSEESFPVSGPSGPGYSESDPPYISEGHIKPFKPTIYKPIYPEPNGPDFEPHYETSGHFYKPTYSIEPSGPYKPGFAEPSGPDFKPHFEPVGPVLKPVYPLNEPPFESTRPGLKPLYPVQPNFKPRPVEPSVYRPEYPVQKPGYVPKPAYRPPEHDRPFVPTSPPGYRPGRPGFNPGSKPGFEGDREDGIAVSWRHYTVSGFPCRAGTSCAQNHVAGHWACEPEGGEIGSWDYCCAPTHRCGYSEGFNKPWCYVGPESDQWRPCSEKYYPYHQHNVPHPSQANRDETSRPSGSSHPHTNRPGPYLSEADRRYWDELYKNGPQAYYDRYGNPLPGYTRVPTSDPPHIKPEYSRPASGSWAPAQGGGTRDGLGVPRYWPVAYLHKGPPPNMTYFRYNETTTTEMPKPAESRDLPDDRDSPDQQTLIDKPKIIDNHRGEKKRNISDHDEELHIDIDKTTTAKTVSEVTEIIERVNKSETESTTSDKDVDKMDLIDGIDDKLLDFSKSIEVFDIEDAKKSAKADLKTLRAEERQIEEIGRLLASRRDGKVVLEKRSQKELASKNIAVDEDLLDFNFGNKFPVERRGVVRKVTKDEIERDRNTDRSLEVSETTFVRPPRVLATTENIRKAIVNGKIFYDATIREQRDVLTNATRRSKSLRPLEDRAPSVINSANFGKKKIIKTRNVNPVRRVRRVYRKRYNPEEVRRRLLERDRAKESSVDSSRKI

Summary

Uniprot
A0A2A4J736   A0A194R138   A0A194PTA1  
Pubmed
26354079   
EMBL
NWSH01002683    PCG67689.1    KQ460890    KPJ10965.1    KQ459593    KPI96542.1    + More
Proteomes
UP000218220    UP000053240    UP000053268   
Pfam
PF00024   PAN_1        + More
PF06432   GPI2
PF00160   Pro_isomerase
Interpro
IPR003609   Pan_app        + More
IPR029000   Cyclophilin-like_dom_sf       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR009450   Plno_GlcNAc_GPI2       
IPR002130   Cyclophilin-type_PPIase_dom       
SUPFAM
SSF50891   SSF50891       
Gene 3D
2.40.100.10    
ProteinModelPortal
A0A2A4J736   A0A194R138   A0A194PTA1  
PDB
6J51     E-value=0.00042502,     Score=108

Ontologies

KEGG
105842585    no KO assigned | (RefSeq) uncharacterized LOC105842585
GO
GO:0017176   GO:0006506   GO:0006457   GO:0016021   GO:0003755  

Topology

Length:
1260
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000670000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  1260
 
 

Population Genetic Test Statistics

Pi
264.340644
Theta
194.280791
Tajima's D
1.120172
CLR
0
CSRT
0.693415329233538
Interpretation
Uncertain
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