Gene

KWMTBOMO00814

Pre Gene Modal

BGIBMGA009740

Annotation

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr2(+):3393077-3405182      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.229

CDS

ATGAGAGGTACCAGGGAGACGGACAAGAACGAGAGCGAGACGAAAGATGTGAACGACGGCGAGTTAGAGCGAGACAACGAGATGTACAAACAGTACGTCGACGAGCAAGAGAAATATAAGAAGATAAAGGAGAAGATTCCTAAGAAAGGAGCAGAGAGGGAGAACTTCACGCTGCAGCTCCTGGCTAAATTCAAAACGAAACTTCACGCCATTAAGGAGAAACCACAGACCGGTGACGAGATGGAATCGAAGGACGACGAGAACCTAAACAGTGATGATTGGCTAGCACACAAATTGAGGTTTGAGGATAAAGGCGCTGTTCTGGCTAAAGACGCGTCGACTAAAGGGGACGACTGGTTCGACATTTACGACCCCAGGAATCCGATTAACAAGAGGAAGAGGGAGAAAAATGAGAAAAGCGCTAAGAAATAA

Protein

MRGTRETDKNESETKDVNDGELERDNEMYKQYVDEQEKYKKIKEKIPKKGAERENFTLQLLAKFKTKLHAIKEKPQTGDEMESKDDENLNSDDWLAHKLRFEDKGAVLAKDASTKGDDWFDIYDPRNPINKRKREKNEKSAKK

Uniprot

S4PVG1   A0A194PTA1   A0A1E1WRM7   A0A2A4ITM9   A0A0K8TM99   W8BIC7   + More
Q16WA4   A0A1S4FLW9   A0A182H1F5   A0A182GGM3   A0A0L0C4I1   Q1HQK4   U5EY38   A0A182MB31   A0A182WIY6   A0A1I8NQL7   A0A1I8NQL6   A0A182XZC4   A0A1A9Y1I6   A0A182T610   A0A1B0C4T2   A0A1A9VYS7   A0A1B0AI11   A0A1B0FB56   A0A1A9WEA6   A0A182PA05   A0A1I8MP00   A0A0J7P4A2   A0A182JAS3   E2BNU1   A0A2P8Y6C9   A0A084VF63   A0A1Q3F6N8   A0A158P3K5   A0A336MQ48   A0A0L7R4G3   A0A195BYZ1   E1ZX62   A0A067R7W7   F4WAT9   A0A151IV62   A0A2J7PD87   A0A310SE84   B4H480   Q29DY0   A0A151IH65   B0WNQ2   A0A195F1C5   E9J8R4   A0A2J7PD97   A0A1W4X6F8   A0A026WXY4   A0A087ZQ64   A0A3L8DGA2   E0VQG7   A0A1B0CMB8   A0A2A3EJ52   A0A0T6B3X2   A0A154PJ08   A0A2H8TZQ2   A0A162TBU7   A0A0P6GZZ9   A0A0P4XTA3  

Pubmed

23622113    26354079    26369729    24495485    17510324    26483478    + More
26108605    17204158    25244985    25315136    20798317    29403074    24438588    21347285    24845553    21719571    17994087    15632085    21282665    24508170    30249741    20566863   

EMBL

GAIX01008598    JAA83962.1    KQ459593    KPI96542.1    GDQN01001420    JAT89634.1    + More
NWSH01007247    PCG63029.1    GDAI01002330    JAI15273.1    GAMC01005560    JAC00996.1    CH477572    EAT38846.1    JXUM01023001    KQ560647    KXJ81455.1    JXUM01164551    KQ575386    KXJ67830.1    JRES01000932    KNC27162.1    DQ440440    ABF18473.1    GANO01000551    JAB59320.1    AXCM01001459    JXJN01025643    CCAG010007618    LBMM01000143    KMR04764.1    GL449507    EFN82624.1    PYGN01000874    PSN39805.1    ATLV01012362    KE524785    KFB36607.1    GFDL01011811    JAV23234.1    ADTU01008167    UFQT01001784    SSX31795.1    KQ414658    KOC65646.1    KQ976394    KYM93141.1    GL435030    EFN74152.1    KK852647    KDR19518.1    GL888053    EGI68695.1    KQ980924    KYN11417.1    NEVH01026392    PNF14300.1    KQ767768    OAD53306.1    CH479208    EDW31195.1    CH379070    EAL30283.2    KQ977636    KYN01148.1    DS232014    EDS31893.1    KQ981880    KYN33904.1    GL769036    EFZ10801.1    PNF14301.1    KK107064    EZA60902.1    QOIP01000008    RLU19222.1    DS235430    EEB15623.1    AJWK01018556    KZ288229    PBC31718.1    LJIG01016026    KRT81838.1    KQ434904    KZC11190.1    GFXV01007187    MBW18992.1    LRGB01000005    KZS22066.1    GDIQ01026958    JAN67779.1    GDIP01241092    JAI82309.1   

Proteomes

UP000053268    UP000218220    UP000008820    UP000069940    UP000249989    UP000037069    + More
UP000075883    UP000075920    UP000095300    UP000076408    UP000092443    UP000075901    UP000092460    UP000078200    UP000092445    UP000092444    UP000091820    UP000075885    UP000095301    UP000036403    UP000075880    UP000008237    UP000245037    UP000030765    UP000005205    UP000053825    UP000078540    UP000000311    UP000027135    UP000007755    UP000078492    UP000235965    UP000008744    UP000001819    UP000078542    UP000002320    UP000078541    UP000192223    UP000053097    UP000005203    UP000279307    UP000009046    UP000092461    UP000242457    UP000076502    UP000076858   

Pfam

PF00160   Pro_isomerase        + More
PF00024   PAN_1
PF16040   DUF4792
PF00010   HLH
PF16041   DUF4793

Interpro

IPR003609   Pan_app        + More
IPR002130   Cyclophilin-type_PPIase_dom       
IPR029000   Cyclophilin-like_dom_sf       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR011598   bHLH_dom       
IPR032010   DUF4793       
IPR032008   DUF4792       
IPR036638   HLH_DNA-bd_sf       

SUPFAM

SSF50891   SSF50891        + More
SSF47459   SSF47459       

Gene 3D

2.40.100.10     4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

S4PVG1   A0A194PTA1   A0A1E1WRM7   A0A2A4ITM9   A0A0K8TM99   W8BIC7   + More
Q16WA4   A0A1S4FLW9   A0A182H1F5   A0A182GGM3   A0A0L0C4I1   Q1HQK4   U5EY38   A0A182MB31   A0A182WIY6   A0A1I8NQL7   A0A1I8NQL6   A0A182XZC4   A0A1A9Y1I6   A0A182T610   A0A1B0C4T2   A0A1A9VYS7   A0A1B0AI11   A0A1B0FB56   A0A1A9WEA6   A0A182PA05   A0A1I8MP00   A0A0J7P4A2   A0A182JAS3   E2BNU1   A0A2P8Y6C9   A0A084VF63   A0A1Q3F6N8   A0A158P3K5   A0A336MQ48   A0A0L7R4G3   A0A195BYZ1   E1ZX62   A0A067R7W7   F4WAT9   A0A151IV62   A0A2J7PD87   A0A310SE84   B4H480   Q29DY0   A0A151IH65   B0WNQ2   A0A195F1C5   E9J8R4   A0A2J7PD97   A0A1W4X6F8   A0A026WXY4   A0A087ZQ64   A0A3L8DGA2   E0VQG7   A0A1B0CMB8   A0A2A3EJ52   A0A0T6B3X2   A0A154PJ08   A0A2H8TZQ2   A0A162TBU7   A0A0P6GZZ9   A0A0P4XTA3  

PDB

6FF7     E-value=1.05502e-10,     Score=154

KEGG

101744679    K12737 peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-tran

GO

GO:0016853   GO:0006457   GO:0003755   GO:0046983   GO:0016021  

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.70457

inside

1  -  143

 

 

Pi

197.494684

Theta

163.107689

Tajima's D

1.801763

CLR

1.49368

CSRT

0.844907754612269

Interpretation

Uncertain