SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00805
Pre Gene Modal
BGIBMGA009694
Annotation
PREDICTED:_serine_proteinase_stubble_isoform_X2_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.746
 

Sequence

CDS
ATGGACTGTGGTCTACCTTCATCAAGGATACTACAGAAGAGGATCATAGGAGGACGCGAAGCGAGGTTTGCCGAGTTCCCGTGGCAGGCTCACGTCAGGATATCCGAATTTCAATGTGGAGGAGTTTTGGTGTCCCGTTGGTACGTGGCGACGGCGGCTCACTGCGTATCGAGAGCGCGGCCGCGTGACATCGTTGTATGGCTCGGAGCACTCGACACCACGGCTGGCGACGAGACTGCACGGAAACTTGGGGTCGTTCGGAAGATCCTCCATCCTCTGTTTCAATTCCGGATAACCCAACCGGACCGCTACGACATAGCTTTGCTAAAGCTCTCCCAGCCCGTCACGTACATGTCGCATATCCTGCCCATTTGCCTGCCTGATCACGACCTGCAACTGAAAGGCAAGTCGGGAGTTATCGCAGGATGGGGAAAAACGGACACGAGTAATGGCCACACCGGAACGAATCTGTTAAGATCTGCCACCGTGCCTATACTGAGCAAAGAGCAGTGCATCAGCTGGCACCAGAGCAAGCAGATATCAGTCGAGATACATTCAGAGATGATATGCGCCGGGCATTCTGATGGACACCAAGACGCATGTTTAGGTGACTCAGGCGGACCCCTCATAGTCCTCGACAACGGAAGGTATTACCTTGTGGGGATCACTTCGGCGGGCTTCGGCTGCGGTGTGGACCATCAGCCCGGCATCTACCACAACGTCAAAGTGACAGCCAACTGGATACGAGGAGTTATAGCCTCCATCAACTACATTGACTTCTGA
Protein
MDCGLPSSRILQKRIIGGREARFAEFPWQAHVRISEFQCGGVLVSRWYVATAAHCVSRARPRDIVVWLGALDTTAGDETARKLGVVRKILHPLFQFRITQPDRYDIALLKLSQPVTYMSHILPICLPDHDLQLKGKSGVIAGWGKTDTSNGHTGTNLLRSATVPILSKEQCISWHQSKQISVEIHSEMICAGHSDGHQDACLGDSGGPLIVLDNGRYYLVGITSAGFGCGVDHQPGIYHNVKVTANWIRGVIASINYIDF

Summary

Similarity
Belongs to the peptidase S1 family.
Belongs to the glycosyl hydrolase 18 family.
EMBL
BABH01017449    KQ459593    KPI96536.1    KQ460890    KPJ10960.1    AGBW02011281    + More
OWR46899.1    NWSH01002003    PCG69461.1    CH477189    EAT48736.1    JXUM01007253    KQ560236    KXJ83682.1    GDUN01001001    JAN94918.1    DS232097    EDS34711.1    JXUM01112968    JXUM01112969    KQ565643    KXJ70821.1    ATLV01020131    KE525295    KFB44878.1    ADMH02000815    ETN64963.1    AAAB01008984    EAA14868.4    AXCN02000678    APCN01003415    GAKP01012783    JAC46169.1    GBXI01011048    JAD03244.1    GDHF01031874    GDHF01026735    JAI20440.1    JAI25579.1    NEVH01000602    PNF43469.1    GAMC01000925    JAC05631.1    UFQS01001651    UFQT01001651    SSX11735.1    SSX31300.1    CM000157    EDW89435.1    UFQS01001782    UFQT01001782    SSX12339.1    SSX31790.1    CH954177    EDV59440.1    CM000362    CM002911    EDX06275.1    KMY92400.1    CH480816    EDW47029.1    AE013599    AAF59005.1    CH902619    EDV35936.1    OUUW01000001    SPP74454.1    CH940648    EDW59892.1    CP012524    ALC40779.1    CH479183    EDW36094.1    CM000071    EAL25680.2    CH964154    EDW79822.1    CH933808    EDW08681.1    CH916367    EDW01787.1    JXJN01017387    KQ971354    EFA07413.2    GBHO01033996    GBHO01033993    GBHO01033990    GBHO01024903    JAG09608.1    JAG09611.1    JAG09614.1    JAG18701.1    GBRD01012570    JAG53254.1    GBHO01033994    GBHO01033992    GBHO01033991    GBHO01024900    GDHC01021450    JAG09610.1    JAG09612.1    JAG09613.1    JAG18704.1    JAP97178.1    ACPB03021400    GEBQ01015790    JAT24187.1    GFTR01005572    JAW10854.1    SSX11734.1    SSX31299.1    KJ512105    AID60328.1    LJIJ01001363    ODM91977.1    KB631652    ERL85033.1    APGK01058276    KB741288    ENN70643.1    GDIP01058856    JAM44859.1    GDIQ01032123    JAN62614.1    GDIP01224683    JAI98718.1    GDIQ01136432    JAL15294.1    CVRI01000047    CRK97952.1    GDIP01047365    JAM56350.1    GDIQ01225808    JAK25917.1    GL732560    EFX77790.1    GDIQ01068767    JAN25970.1    GDIP01156137    JAJ67265.1    GDIQ01175256    JAK76469.1    GDIQ01076253    JAN18484.1    GDIP01146291    JAJ77111.1    GDIQ01041618    JAN53119.1    GDIQ01199005    JAK52720.1    GDIQ01073456    JAN21281.1    GDIQ01146933    JAL04793.1    GDIP01047364    LRGB01002076    JAM56351.1    KZS09397.1    GDIQ01171368    JAK80357.1    GDIQ01214256    JAK37469.1    GDIQ01032521    JAN62216.1    LNIX01000021    OXA43735.1    GDIQ01184520    JAK67205.1    GDIQ01254600    JAJ97124.1    GDIQ01054663    JAN40074.1    CH900107    EAT32404.2    GDIQ01005680    JAN89057.1    SSX12340.1    SSX31791.1   
Pfam
PF00089   Trypsin        + More
PF00704   Glyco_hydro_18
PF01055   Glyco_hydro_31
Interpro
IPR001314   Peptidase_S1A        + More
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR033116   TRYPSIN_SER       
IPR017853   Glycoside_hydrolase_SF       
IPR011583   Chitinase_II       
IPR029070   Chitinase_insertion_sf       
IPR001223   Glyco_hydro18_cat       
IPR018114   TRYPSIN_HIS       
IPR013780   Glyco_hydro_b       
IPR000322   Glyco_hydro_31       
SUPFAM
SSF50494   SSF50494        + More
SSF54556   SSF54556       
SSF51445   SSF51445       
Gene 3D
PDB
1QRZ     E-value=1.87812e-36,     Score=380

Ontologies

Topology

Length:
260
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0257
Exp number, first 60 AAs:
0.00414
Total prob of N-in:
0.02207
outside
1  -  260
 
 

Population Genetic Test Statistics

Pi
73.033976
Theta
195.840323
Tajima's D
-0.696888
CLR
1.230752
CSRT
0.200789960501975
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号