Silkworm Genome Informatics Database

Gene

KWMTBOMO00802

Annotation

PREDICTED:_uncharacterized_protein_LOC106131020_[Amyelois_transitella]

Location

Bomo_Chr2(+):3198135-3205660 View in EpiBrowser

Location in the cell

Extracellular Reliability : 3.311

CDS

ATGGCGAATTTATTTTGCATTTTGGTATCGATGGGCGTAGCAGCAGTACTGTCCCAGCAGGCCATCGACTATTACCACGTGCTGCACCTTCCCCACCACCCCCCACTCCACTCTGTATACGACCACGCACCCCCCACTCGCTTCTCCTGCGCCGGACGACAGAAAGGATACTACGCTGATATAGACAGTGGATGTCAAGCCTATCACTTCTGCTGGCGGCAACGTCTGATCAGCACCGACTTATGCTCAAAGGGGACGCTCTTCAACGAACAGTTTCAGGTCTGCGATCACTTCTACAACGTTCGCTGCGGTTCGCCTTATGAAGATCTTTAA

Protein

MANLFCILVSMGVAAVLSQQAIDYYHVLHLPHHPPLHSVYDHAPPTRFSCAGRQKGYYADIDSGCQAYHFCWRQRLISTDLCSKGTLFNEQFQVCDHFYNVRCGSPYEDL

Similarity

Belongs to the glycosyl hydrolase 18 family.

Uniprot

A0A212F4B7 A0A0L7LJJ5 A0A194PUV9 A0A2H1VPL2 D1MAH8 A0A194QZJ0 + More
A0A232ERM6 K7JLL8 A0A154P1R6 A0A2S1ZS55 A0A2P8Y6T9 A0A067QRJ4 A0A2J7PZ55 A0A2R7VR69 A0A226EKQ4 E9GU25 A0A1B0FN13 A0A0P5ART6 A0A0P5VUT2

Pubmed

22118469 26227816 26354079 18362917 20144715 19820115 + More
28648823 20075255 29712872 29403074 24845553 21292972

EMBL

AGBW02010396 OWR48577.1 JTDY01000871 KOB75600.1 KQ459593 KPI96534.1 + More
ODYU01003512 SOQ42392.1 GU128086 KQ971352 ACY95469.1 KYB26600.1 KQ460890 KPJ10958.1 NNAY01002575 OXU21014.1 KQ434796 KZC05797.1 MF942774 AWK28297.1 PYGN01000858 PSN39971.1 KK853022 KDR12368.1 NEVH01020339 PNF21619.1 KK854024 PTY09628.1 LNIX01000003 OXA58222.1 GL732565 EFX76962.1 CCAG010013983 GDIP01195354 JAJ28048.1 GDIP01094964 JAM08751.1

Proteomes

UP000007151 UP000037510 UP000053268 UP000007266 UP000053240 UP000215335 + More
UP000002358 UP000076502 UP000245037 UP000027135 UP000235965 UP000198287 UP000000305 UP000092444

Pfam

PF01607 CBM_14 + More
PF00704 Glyco_hydro_18

Interpro

IPR002557   Chitin-bd_dom        + More
IPR036508   Chitin-bd_dom_sf
IPR001579   Glyco_hydro_18_chit_AS
IPR029070   Chitinase_insertion_sf
IPR001223   Glyco_hydro18_cat
IPR011583   Chitinase_II
IPR017853   Glycoside_hydrolase_SF

SUPFAM

SSF57625   SSF57625        + More
SSF54556   SSF54556
SSF51445   SSF51445

Gene 3D

3.10.50.10

ProteinModelPortal

A0A212F4B7 A0A0L7LJJ5 A0A194PUV9 A0A2H1VPL2 D1MAH8 A0A194QZJ0 + More
A0A232ERM6 K7JLL8 A0A154P1R6 A0A2S1ZS55 A0A2P8Y6T9 A0A067QRJ4 A0A2J7PZ55 A0A2R7VR69 A0A226EKQ4 E9GU25 A0A1B0FN13 A0A0P5ART6 A0A0P5VUT2

KEGG

101744246 no KO assigned | (RefSeq) uncharacterized LOC101744246

GO

GO:0005576 GO:0008061 GO:0006030 GO:0005975 GO:0004553 GO:0004702 GO:0007178 GO:0016020 GO:0004675 GO:0006559 GO:0004887 GO:0016021

SignalP

Position: 1 - 18, Likelihood: 0.977462

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.96402

Exp number, first 60 AAs:

3.9639

Total prob of N-in:

0.24929

outside

1 - 110

Pi

348.173647

Theta

169.255674

Tajima's D

3.175756

CLR

0.094673

CSRT

0.985850707464627

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics