Gene

KWMTBOMO00793  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009699

Annotation

PREDICTED:_T-complex_protein_1_subunit_epsilon_[Amyelois_transitella]

Location

Bomo_Chr2(-):3063333-3074464      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.754

CDS

ATGGCCCTGTTCCCGGGATCGGTGGCCTTTGATGAGTATGGCCGTCCATTTATAATCTTGAGGGATCAAGATAGACAGAAAAGACTTACCGGTACCGATGCCATAAAGTCACATATACAGGCAGCCCGACAAATTGCAAGCACTCTTCGCACATCTCTTGGTCCCCGCGGTCTTGATAAGCTTATGGTGTCGTCTGATGGTGATGTGACAGTAACAAATGATGGGGCTACAATTCTAAAAATGATGGACGTTGAGCATCAGATTGGTAAACTACTTGTGCAATTGGCTCAGAGTCAAGATGACGAAATTGGTGATGGTACCACAGGGGTTGTTGTTCTTGCTGGTGCACTCCTTGAGCAAGCCTCAAATCTGTTGGACAAAGGTATCCATCCGATTCGTATAGCCGATGGTTATGAGATGGCTGCCGCCCTGGCACTGACCCATCTTGACAGCGTCAGTGAAGCTTTCCCAGTCAACAAGAATACGAGGGAAAATTTAATTAAGGTGGCCATGACAACCTTGGGCAGTAAAGTGGTGGTCAAGTGTCACAGGTTGATGGCAGAAATAGCTGTTGATGCTGTCCTGGCTGTGGCAGACTTAGAGACGCGAGACGTCAATTTCGAGCTGATCAAAGTGGAGGGAAAAGTTGGAGGACGCATGGAGGATTCTGTTCTTGTTCGAGGTGTCGTTGTGGACAAAACGATGAGTCACCCTCAAATGCCCAAAGTACTCCGGAATGTGAAACTAGCAATCCTGACCTGCCCGTTCGAACCACCCAAACCCAAGACCAAGCATAAGCTCCAGGTGGGCTCCGCTGATGAATACCGTGAGCTGAGACAGTATGAACACGATAAATTCATCGAAATGGTCCGCAAAGTTAAGGATGCAGGTGCTACTCTAGCAATCTGCCAGTGGGGCTTTGATGATGAAGCCAACCATCTCCTGCTGGCTGAAGGTCTACCAGCCGTACGCTGGGTGGGTGGACCAGAAATGGAGCTCATCGCCATTGCGACTGGCGGCAGGATCGTGCCTAGATTTGAAGAACTCACTCCAGAGAAACTTGGCTCATGTGGACTAGTACGAGAACTTACTTTTGGTACATCAAAAGAAGAGATGTTGGTGATAGAAGAGTGTTCCAACTCTCGAGCGGTAACTGTACTTGTGAGAGGAGGGAATAGAATGATTGTGGAGGAAGCCAAGCGTTCGGTGCATGATGCTCTGTGCATTGTGCGCAGTCTTGTACAGGACTCGCGCGTGGTGTACGGCGGTGGCGCGGCGGAGGCGTCGTGCTCGCTGGCAGTCAGCGCGGCCGCTGAGAAGCTATCCTCGCTCGATCAGTACGCGTTCAGAGCCTTCGGAGATGCGCTCGAGGCCATACCTCTGGCACTCGCCGAAAACAGCGGCTTATCACCTATTGATGCATTGTCTGAAGTGAAAGCGAGACAAGTTGCTGAGAATAATCCCTACTTGGGAATCGACTGCATGTCAAAAGGTTCAAATGACATGAAAGCAATGAACGTAATTGAATCGTTGCACTCAAAGAAACAGCAGATAGCTCTGGCCACCCAACTCGTCAAGATGATACTCAAGATTGATGATGTCCGGTCACCTGCAGACTCCATCGAATAA

Protein

MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIAVDAVLAVADLETRDVNFELIKVEGKVGGRMEDSVLVRGVVVDKTMSHPQMPKVLRNVKLAILTCPFEPPKPKTKHKLQVGSADEYRELRQYEHDKFIEMVRKVKDAGATLAICQWGFDDEANHLLLAEGLPAVRWVGGPEMELIAIATGGRIVPRFEELTPEKLGSCGLVRELTFGTSKEEMLVIEECSNSRAVTVLVRGGNRMIVEEAKRSVHDALCIVRSLVQDSRVVYGGGAAEASCSLAVSAAAEKLSSLDQYAFRAFGDALEAIPLALAENSGLSPIDALSEVKARQVAENNPYLGIDCMSKGSNDMKAMNVIESLHSKKQQIALATQLVKMILKIDDVRSPADSIE

Similarity

Belongs to the TCP-1 chaperonin family.

Uniprot

H9JJJ8   A0A2A4JJQ5   A0A194PT86   A0A194QZS2   A0A212EPJ9   A0A1B6KJV8   + More
A0A023EWD6   A0A097PHN6   A0A1B6GHV6   A0A1L8EE66   A0A2P8Y706   A0A182H9M4   A0A1S4EZR6   T1PAU1   A0A0L0CF33   B4KMN2   A0A3B0J741   Q17KD5   Q293E0   B4GBU9   B4J4M7   A0A232FBI2   A0A1I8PBX8   W8C6G9   B0XGB7   K7IV31   T1D3W9   B4HP56   A0A0J9RAR7   B3NS73   Q7KKI0   A0A1W4ULS5   A0A1W4WN70   A0A182Y3I7   B3MH19   A0A2M4A6N5   A0A1A9XDF7   A0A1B0AML6   A0A2J7RAN2   B4LNH7   A0A182NU32   A0A1A9UK11   T1E783   D2A1F8   A0A2M4A6E1   A0A2M4BJH8   A0A182F140   A0A1B0AFU9   B4P5N3   W5J3N6   E0VSM9   A0A1Q3F539   A0A1Q3F4J5   A0A0A1X9V6   A0A0M3QVL0   A0A034W3H8   U5EUG1   A0A1J1IHK9   B4NMW6   A0A182W6S4   A0A182XL29   A0A182UUS1   A0A182U1C1   A0A182PCM4   A0A0K8TSU0   A0A2M4BKI2   A0A1B0D4S6   A0A1L8DUF7   A0A182Q8N6   A0A182J8P6   A0A182JXW2   A0A084W4S8   A0A182L112   Q7Q467   A0A182ICJ3   A0A0U2HUG4   A0A182M0Q1   X1WV13   A0A182R2Y6   A0A0P6H8C7   A0A0N8AI12   A0A0N8CEK0   A0A1Y1MKQ3   A0A2S2N8L1   A0A0P4ZYX3   A0A1B6D5X1   A0A0N7ZQT6   A0A0P5I5M7   A0A067RTG8   A0A0P5H4B5   A0A154P7A5   N6TEJ1   A0A336MAX3   J3JWI9   N6TRW5   E9H224   A0A0P4WBF7   T1IZH6   V5RDW2   A0A0T6B8L4  

Pubmed

19121390    26354079    22118469    24945155    29403074    26483478    + More
25315136    26108605    17994087    17510324    15632085    28648823    24495485    20075255    24330624    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    18362917    19820115    17550304    20920257    23761445    20566863    25830018    25348373    26369729    24438588    20966253    12364791    14747013    17210077    28004739    24845553    23537049    22516182    21292972   

EMBL

BABH01017422    NWSH01001257    PCG71958.1    KQ459593    KPI96527.1    KQ460890    + More
KPJ10952.1    AGBW02013449    OWR43418.1    GEBQ01028251    GEBQ01026767    JAT11726.1    JAT13210.1    GAPW01000864    JAC12734.1    KM221891    AIU47032.1    GECZ01023670    GECZ01022974    GECZ01021022    GECZ01017591    GECZ01007876    GECZ01003617    JAS46099.1    JAS46795.1    JAS48747.1    JAS52178.1    JAS61893.1    JAS66152.1    GFDG01001910    JAV16889.1    PYGN01000852    PSN40030.1    JXUM01030590    KQ560889    KXJ80468.1    KA645857    AFP60486.1    JRES01000487    KNC30851.1    CH933808    EDW08774.1    OUUW01000001    SPP75923.1    CH477225    EAT47156.1    CM000071    EAL24671.1    CH479181    EDW31328.1    CH916367    EDW02732.1    NNAY01000532    OXU27840.1    GAMC01001122    JAC05434.1    DS233011    EDS27370.1    AAZX01001194    GALA01001203    JAA93649.1    CH480816    EDW47505.1    CM002911    KMY93110.1    KMY93111.1    CH954179    EDV56375.1    AF172635    AE013599    AAD46928.1    AAF58565.1    CH902619    EDV35778.1    GGFK01003090    MBW36411.1    JXJN01000499    NEVH01006567    PNF37886.1    CH940648    EDW62157.1    GAMD01003272    JAA98318.1    KQ971338    EFA02100.1    GGFK01003032    MBW36353.1    GGFJ01004085    MBW53226.1    CM000158    EDW90830.1    ADMH02002106    ETN58977.1    DS235751    EEB16385.1    GFDL01012370    JAV22675.1    GFDL01012565    JAV22480.1    GBXI01006208    JAD08084.1    CP012524    ALC42589.1    GAKP01010629    JAC48323.1    GANO01001488    JAB58383.1    CVRI01000047    CRK97937.1    CH964282    EDW85705.1    GDAI01000407    JAI17196.1    GGFJ01004157    MBW53298.1    AJVK01024828    GFDF01004013    JAV10071.1    AXCN02000781    ATLV01020380    KE525299    KFB45222.1    AAAB01008964    EAA12349.3    APCN01000802    KR181953    ALJ76677.1    AXCM01007289    ABLF02022344    ABLF02022348    ABLF02045642    GDIQ01023215    JAN71522.1    GDIP01145441    JAJ77961.1    GDIP01252174    GDIP01230534    GDIP01139447    GDIP01135351    LRGB01001005    JAL64267.1    KZS14107.1    GEZM01028452    JAV86299.1    GGMR01000850    MBY13469.1    GDIP01219287    JAJ04115.1    GEDC01016225    JAS21073.1    GDIP01221649    JAJ01753.1    GDIQ01224399    JAK27326.1    KK852427    KDR24110.1    GDIQ01239244    JAK12481.1    KQ434822    KZC07078.1    APGK01032099    KB740835    ENN78789.1    UFQT01000827    UFQT01002674    SSX27425.1    SSX33909.1    BT127607    AEE62569.1    APGK01005323    KB736187    ENN83244.1    GL732585    EFX74207.1    GDRN01066335    JAI64549.1    AFFK01020457    JH431580    KF621131    AHB33467.1    LJIG01009390    KRT83175.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000245037    + More
UP000069940    UP000249989    UP000095301    UP000037069    UP000009192    UP000268350    UP000008820    UP000001819    UP000008744    UP000001070    UP000215335    UP000095300    UP000002320    UP000002358    UP000001292    UP000008711    UP000000803    UP000192221    UP000192223    UP000076408    UP000007801    UP000092443    UP000092460    UP000235965    UP000008792    UP000075884    UP000078200    UP000007266    UP000069272    UP000092445    UP000002282    UP000000673    UP000009046    UP000092553    UP000183832    UP000007798    UP000075920    UP000076407    UP000075903    UP000075902    UP000075885    UP000092462    UP000075886    UP000075880    UP000075881    UP000030765    UP000075882    UP000007062    UP000075840    UP000075883    UP000007819    UP000075900    UP000076858    UP000027135    UP000076502    UP000019118    UP000000305   

PRIDE

H9JJJ8    Q7KKI0   

Pfam

PF00118   Cpn60_TCP1        + More
PF00730   HhH-GPD
PF07934   OGG_N

Interpro

IPR027410   TCP-1-like_intermed_sf        + More
IPR002423   Cpn60/TCP-1       
IPR017998   Chaperone_TCP-1       
IPR002194   Chaperonin_TCP-1_CS       
IPR027413   GROEL-like_equatorial_sf       
IPR027409   GroEL-like_apical_dom_sf       
IPR011257   DNA_glycosylase       
IPR012904   OGG_N       
IPR023170   HTH_base_excis_C       
IPR003265   HhH-GPD_domain       

SUPFAM

SSF48592   SSF48592        + More
SSF54849   SSF54849       
SSF52029   SSF52029       
SSF48150   SSF48150       

Gene 3D

1.10.560.10     3.30.260.10     3.50.7.10     1.10.1670.10    

CDD

cd00056  ENDO3c

ProteinModelPortal

H9JJJ8   A0A2A4JJQ5   A0A194PT86   A0A194QZS2   A0A212EPJ9   A0A1B6KJV8   + More
A0A023EWD6   A0A097PHN6   A0A1B6GHV6   A0A1L8EE66   A0A2P8Y706   A0A182H9M4   A0A1S4EZR6   T1PAU1   A0A0L0CF33   B4KMN2   A0A3B0J741   Q17KD5   Q293E0   B4GBU9   B4J4M7   A0A232FBI2   A0A1I8PBX8   W8C6G9   B0XGB7   K7IV31   T1D3W9   B4HP56   A0A0J9RAR7   B3NS73   Q7KKI0   A0A1W4ULS5   A0A1W4WN70   A0A182Y3I7   B3MH19   A0A2M4A6N5   A0A1A9XDF7   A0A1B0AML6   A0A2J7RAN2   B4LNH7   A0A182NU32   A0A1A9UK11   T1E783   D2A1F8   A0A2M4A6E1   A0A2M4BJH8   A0A182F140   A0A1B0AFU9   B4P5N3   W5J3N6   E0VSM9   A0A1Q3F539   A0A1Q3F4J5   A0A0A1X9V6   A0A0M3QVL0   A0A034W3H8   U5EUG1   A0A1J1IHK9   B4NMW6   A0A182W6S4   A0A182XL29   A0A182UUS1   A0A182U1C1   A0A182PCM4   A0A0K8TSU0   A0A2M4BKI2   A0A1B0D4S6   A0A1L8DUF7   A0A182Q8N6   A0A182J8P6   A0A182JXW2   A0A084W4S8   A0A182L112   Q7Q467   A0A182ICJ3   A0A0U2HUG4   A0A182M0Q1   X1WV13   A0A182R2Y6   A0A0P6H8C7   A0A0N8AI12   A0A0N8CEK0   A0A1Y1MKQ3   A0A2S2N8L1   A0A0P4ZYX3   A0A1B6D5X1   A0A0N7ZQT6   A0A0P5I5M7   A0A067RTG8   A0A0P5H4B5   A0A154P7A5   N6TEJ1   A0A336MAX3   J3JWI9   N6TRW5   E9H224   A0A0P4WBF7   T1IZH6   V5RDW2   A0A0T6B8L4  

PDB

4B2T     E-value=0,     Score=1947

KEGG

101743807    K09497 T-complex protein 1 subunit epsilon | (RefSeq) T-complex protein 1 subunit epsilon

GO

GO:0051082   GO:0006457   GO:0005524   GO:0005737   GO:0016887   GO:0005832   GO:0008534   GO:0003684   GO:0006284   GO:0006289   GO:0016070   GO:0006260   GO:0006418   GO:0006559   GO:0004887   GO:0016021  

Subcellular location

Cytoplasm  

Length:

542

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00011

outside

1  -  542

 

 

Pi

240.64167

Theta

172.982461

Tajima's D

2.094873

CLR

0.199008

CSRT

0.897705114744263

Interpretation

Uncertain