Gene

KWMTBOMO00792

Pre Gene Modal

BGIBMGA009732

Annotation

ARP6_actin-related_protein_6-like_protein_[Bombyx_mori]

Location

Bomo_Chr2(+):3057575-3059575      View in EpiBrowser

Full name

Actin-related protein 6      

Alternative Name

gARPX

Location in the cell

Cytoplasmic   Reliability : 1.719 PlasmaMembrane   Reliability : 1.576

CDS

ATGAGCGAGACCTCTTGTTATATATTGGACAACGGAGCCTATACGGCTAAAGTTGGCTTCTCCAATTCCAAATCCAGGATAATACCTAATTGCATTATGAAGGCGAAATCTGAGAGACGCCGCCCTTTCATAGGCTCTCAGCTTGACGAGTGTCGCGACGCTTCAGGATTGTTCTACATCTTGCCTTTCCAGAAAGGTTTTCTAGTCAATTGGGACACTCAAAAAACCGTCTGGGACTTCATATTCAGCAAAGAATGCTGCCCAGTCAACTTCAATGACACCCCGCTGATCATAACCGAGCCGCTTTTTAACTTTGCCTCAATACAAGAGGCGATGACGGAAATATTCTTCGAAGAATACGAATGCCAGTCGTTGTTACGGATAAATGCTACAGATCTGGCTGAATACAATTATCGTAGGACTCATAAAAATGACTGCACAGTTGTAGTTGACTCCGGTTATAGTTTTACTTACATAGTTCCATACATAAATGGCAAAAAATATAAAGACGCGATTATAAGGATTGATGTTGGCGGGAAAGTGCTTACGAATCATTTGAAAGAGATCTTGTCGTATCGGCAATTGAACGTTATGGATGAAACCTATGTCATTAATCAAGTCAAAGAAGACTCCTGTTTTGTGTCCAAAGACTTTTTTGCGGATATGGAAATTGCTAAGAAGAAAGGACCAGAGAATGCAATTGTAAAAGACTATGTGTTGCCTGACTACACATCCTTGCGTCGAGGTTATCTACGAGACATAGTCCCACCAGAAGAGGACCTGGAACAACAGACATTACGGTTGAACAATGAGAGGTTTTCCATTCCGGAACTATTGTTCCACCCCTCAGACGTCGGCATCCAACAGATGGGAATACCAGAAGCCATCATGCACTCGATAAACTCTTGCCCAGAAGAGCATACGGAAAACCTACTGGCAAATATAGTTTTATACGGTGGGAACACATTATTCCCTGGTTTCCGTGACAGAGTTTACAACGATGTGCGTTCTTTAGCCTTAGATCATTTTGATGTGAACATTGAACTACCAGACAACCCGATCACATATGCTTGGGAAGGTGGAAAATATATATTTCGTGATCCAGAATTTTATTCGTTTTGTATGACTAAGGAAGAGTATGAGGAAGAAGGGAAGCCACTGGCATTTGAAAGGTTCGATATATAA

Protein

MSETSCYILDNGAYTAKVGFSNSKSRIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNHLKEILSYRQLNVMDETYVINQVKEDSCFVSKDFFADMEIAKKKGPENAIVKDYVLPDYTSLRRGYLRDIVPPEEDLEQQTLRLNNERFSIPELLFHPSDVGIQQMGIPEAIMHSINSCPEEHTENLLANIVLYGGNTLFPGFRDRVYNDVRSLALDHFDVNIELPDNPITYAWEGGKYIFRDPEFYSFCMTKEEYEEEGKPLAFERFDI

Subunit

Interacts with CBX1 and CBX3.

Similarity

Belongs to the actin family.
Belongs to the actin family. ARP6 subfamily.

Keywords

Complete proteome   Cytoplasm   Cytoskeleton   Nucleus   Reference proteome  

Feature

chain  Actin-related protein 6

Uniprot

Q1HPN6   H9JJN1   A0A2H1W5Z0   A0A2A4JJK9   A0A212EPL4   A0A194PSX2   + More
S4P587   A0A194R512   A0A0L7K3S4   A0A067QRY8   A0A1B6G3R9   A0A1B6JEF6   A0A2J7Q7K6   A0A0M9AAH6   A0A0J7KZ34   A0A026W0N8   A0A023F561   A0A2A3EKY5   A0A151X0A9   A0A087ZWH3   A0A1B6LE93   A0A151J336   A0A224XQG1   A0A195FKL3   E2BH96   A0A1B6LT32   A0A0V0G945   E2AW19   A0A069DTN4   F4WR28   T1I7M9   A0A151I663   A0A195C1F7   A0A158NVG4   K7IV76   A0A0P4VQ43   E0W0N1   A0A1Q3EZG1   B0WLT6   A0A182GKU5   A0A0A9WB38   A0A1B0CD89   A0A2H8TTK4   Q0IFH2   E9J5G3   A0A182YEE9   A0A182V3R9   A0A182KPY6   A0A182I260   A0A182PTN4   A0A182XMC5   A0A084WEA8   A0A182NJD9   A0A182QZV5   A0A0P4WI17   A0A182U8I3   A0A182R4I2   A0A182JRR8   A0A182M013   Q7Q6G6   A0A182WLB8   A0A182FH22   A0A2M4BPT5   A0A2M4BPT2   J9K6A7   W5JAD6   A0A182J0F5   A0A182SNJ1   A0A2R7W1U8   A0A0E9X5G1   A0A1B0CZN0   A0A1V4JA95   A0A0Q3USJ0   A0A336LZW8   A0A3B4CSH7   Q9DEE9   A0A218UZY1   A0A3L8SQV8   A0A2I0UMF7   W5NDF3   E3TEF9   A0A3B3RVA5   W5KQ40   A0A2D0RE25   A2VDB7   J3S3X9   A0A0K8S2Y7   A0A151LZ68   F1SQT9   C1BW50   A0A1A8N6Q1   G3QEY5   A0A1A8HAZ4   A0A1U7RPI6   A0A1S3KPA6   L8IZP2   A6H7G6   A0A0D9S136   A0A2K5MCZ2   F7HDC6  

Pubmed

19121390    22118469    26354079    23622113    26227816    24845553    + More
24508170    30249741    25474469    20798317    26334808    21719571    21347285    20075255    27129103    20566863    26483478    25401762    26823975    17510324    21282665    25244985    20966253    24438588    12364791    14747013    17210077    20920257    23761445    25613341    11368909    16487625    30282656    20634964    29240929    25329095    27762356    23025625    25727380    22293439    20433749    25069045    22398555    22751099    19393038    17431167   

EMBL

DQ443366    ABF51455.1    BABH01017421    BABH01017422    ODYU01006556    SOQ48500.1    + More
NWSH01001257    PCG71956.1    AGBW02013449    OWR43419.1    KQ459593    KPI96526.1    GAIX01005694    JAA86866.1    KQ460890    KPJ10951.1    JTDY01012144    KOB52324.1    KK853024    KDR12327.1    GECZ01012689    JAS57080.1    GECU01010060    JAS97646.1    NEVH01017442    PNF24566.1    KQ435713    KOX79293.1    LBMM01001750    KMQ95817.1    KK107591    QOIP01000013    EZA48624.1    RLU15520.1    GBBI01002508    JAC16204.1    KZ288215    PBC32473.1    KQ982617    KYQ53781.1    GEBQ01017970    JAT22007.1    KQ980313    KYN16712.1    GFTR01005736    JAW10690.1    KQ981512    KYN40891.1    GL448287    EFN84865.1    GEBQ01013193    JAT26784.1    GECL01001614    JAP04510.1    GL443213    EFN62441.1    GBGD01001763    JAC87126.1    GL888284    EGI63255.1    ACPB03000182    KQ976415    KYM90152.1    KQ978350    KYM94677.1    ADTU01027147    AAZX01005089    GDKW01002004    JAI54591.1    DS235862    EEB19187.1    GFDL01014350    JAV20695.1    DS231990    EDS30664.1    JXUM01014108    KQ560394    KXJ82641.1    GBHO01039871    GDHC01009114    JAG03733.1    JAQ09515.1    AJWK01007525    GFXV01005778    MBW17583.1    CH477317    EAT43742.1    GL768155    EFZ11939.1    APCN01000123    ATLV01023198    KE525341    KFB48552.1    AXCN02000448    GDRN01037567    JAI67292.1    AXCM01002346    AAAB01008960    EAA11637.4    GGFJ01005939    MBW55080.1    GGFJ01005938    MBW55079.1    ABLF02023577    ADMH02002052    ETN59744.1    KK854195    PTY12920.1    GBXM01010763    JAH97814.1    AJVK01009637    AJVK01009638    LSYS01008398    OPJ69091.1    LMAW01002519    KQK80594.1    UFQT01000063    SSX19248.1    AB038230    MUZQ01000080    OWK59269.1    QUSF01000009    RLW06342.1    KZ505685    PKU47203.1    AHAT01025556    AHAT01025557    AHAT01025558    GU588741    ADO28695.1    BC129725    CM004470    AAI29726.1    OCT88774.1    JU173796    AFJ49322.1    GBKC01000076    GBKD01000035    JAG47583.1    AKHW03007000    KYO17538.1    AEMK02000037    BT078829    ACO13253.1    HAEH01000238    HAEI01006803    SBR64484.1    CABD030086266    CABD030086267    HAEB01001979    HAEC01012167    SBQ80384.1    JH880539    ELR60829.1    BC146238    AAI46239.1    AQIB01023747    JSUE03007572   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000027135    UP000235965    UP000053105    UP000036403    UP000053097    UP000279307    UP000242457    UP000075809    UP000005203    UP000078492    UP000078541    UP000008237    UP000000311    UP000007755    UP000015103    UP000078540    UP000078542    UP000005205    UP000002358    UP000009046    UP000002320    UP000069940    UP000249989    UP000092461    UP000008820    UP000076408    UP000075903    UP000075882    UP000075840    UP000075885    UP000076407    UP000030765    UP000075884    UP000075886    UP000075902    UP000075900    UP000075881    UP000075883    UP000007062    UP000075920    UP000069272    UP000007819    UP000000673    UP000075880    UP000075901    UP000092462    UP000190648    UP000051836    UP000261440    UP000000539    UP000197619    UP000276834    UP000018468    UP000221080    UP000261540    UP000018467    UP000186698    UP000050525    UP000008227    UP000265140    UP000001519    UP000189705    UP000087266    UP000009136    UP000029965    UP000233060    UP000006718   

PRIDE

Q1HPN6    H9JJN1    Q9DEE9    F1SQT9   

Pfam

PF00022   Actin

Interpro

IPR004000   Actin        + More
IPR030054   Arp6       

ProteinModelPortal

Q1HPN6   H9JJN1   A0A2H1W5Z0   A0A2A4JJK9   A0A212EPL4   A0A194PSX2   + More
S4P587   A0A194R512   A0A0L7K3S4   A0A067QRY8   A0A1B6G3R9   A0A1B6JEF6   A0A2J7Q7K6   A0A0M9AAH6   A0A0J7KZ34   A0A026W0N8   A0A023F561   A0A2A3EKY5   A0A151X0A9   A0A087ZWH3   A0A1B6LE93   A0A151J336   A0A224XQG1   A0A195FKL3   E2BH96   A0A1B6LT32   A0A0V0G945   E2AW19   A0A069DTN4   F4WR28   T1I7M9   A0A151I663   A0A195C1F7   A0A158NVG4   K7IV76   A0A0P4VQ43   E0W0N1   A0A1Q3EZG1   B0WLT6   A0A182GKU5   A0A0A9WB38   A0A1B0CD89   A0A2H8TTK4   Q0IFH2   E9J5G3   A0A182YEE9   A0A182V3R9   A0A182KPY6   A0A182I260   A0A182PTN4   A0A182XMC5   A0A084WEA8   A0A182NJD9   A0A182QZV5   A0A0P4WI17   A0A182U8I3   A0A182R4I2   A0A182JRR8   A0A182M013   Q7Q6G6   A0A182WLB8   A0A182FH22   A0A2M4BPT5   A0A2M4BPT2   J9K6A7   W5JAD6   A0A182J0F5   A0A182SNJ1   A0A2R7W1U8   A0A0E9X5G1   A0A1B0CZN0   A0A1V4JA95   A0A0Q3USJ0   A0A336LZW8   A0A3B4CSH7   Q9DEE9   A0A218UZY1   A0A3L8SQV8   A0A2I0UMF7   W5NDF3   E3TEF9   A0A3B3RVA5   W5KQ40   A0A2D0RE25   A2VDB7   J3S3X9   A0A0K8S2Y7   A0A151LZ68   F1SQT9   C1BW50   A0A1A8N6Q1   G3QEY5   A0A1A8HAZ4   A0A1U7RPI6   A0A1S3KPA6   L8IZP2   A6H7G6   A0A0D9S136   A0A2K5MCZ2   F7HDC6  

PDB

5Y81     E-value=8.34132e-45,     Score=454

KEGG

733009    K11662 actin-related protein 6 | (RefSeq) ARP6 actin-related protein 6-like protein

GO

GO:0006338   GO:0005634   GO:0043486   GO:0000812   GO:0031491   GO:0005856   GO:0005737  

PANTHER

PTHR11937:SF47   PTHR11937  

Subcellular location

Cytoplasm  
Cytoskeleton  
Nucleus  

Length:

394

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09032

Exp number, first 60 AAs:

0.00099

Total prob of N-in:

0.01234

outside

1  -  394

 

 

Pi

322.667534

Theta

222.583326

Tajima's D

1.574709

CLR

0

CSRT

0.805109744512774

Interpretation

Uncertain