Gene
KWMTBOMO00787
Pre Gene Modal
BGIBMGA009703
Annotation
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Location in the cell
Nuclear Reliability : 2.752
Sequence
CDS
ATGGAGAAAACGAGAGCCTTGCTTTTGGATGGAGCTGTACCCAAATATCTCTGGGGAGAAGCATTACTAACGGCTAGCTTCTTATTAAACCGATGTCCAACAAAAGGAAAAAATAAAACTCCTGCGGAATTGTGGTTTGGAATAAAACCAGATGTTTCAAATATTCGAAGATTTGGCTCAACTACATATTTTAAAATAAATTCTGGACTAAAAAAGCTTGATGATCGTTGTAAAAAAGGTATTCTGGTTGGCTACGTAAGAAACGGTTATAAAATTTGGGTTGAAGATGAACAAAAAATTATAAGAGCAAGGGATGTAAGAATTAATGAGGGAGAACAAGGAATTCTAGGTGGATACTTAGAAGATAATGAAGTAATTAATGGGCTTTGGGGTGATGAAAGGGAGAACACTAATAGAAATAATACAAATGAAAATAATCGTGCAGATGATGAAGTCAGAGAAGTTCGAGAAGGTGATTTTAGAGGAAATAATAGTAATGGAGTTAATGAAGTTCGAGAAGATGTTGTTATAAGGCAAAATAATAGAGGAAGAAATGAAAATCGAGTAGAAAGAGGAAGAATCATAAATATTGAAGAAACAAATATATTTAGTGAAACAAATGAAGATGAAACAATTGAAGGTGAAACAAATGACAGAGGAACAAATGCAAATGAAAAAAATGAAAATGGAACAAATGATAGCCCATTAACAAATGAAAATCTGGTGGAGACTTTAAGAAGTAATGATGATATGGATGAAAGAGAAGAATTTCTTGACAGTGAAAATACTGAGGGAATTAATGAACAAGTTTTAGAAAATACAAGAACTGGAAGACCGCAGCGGAACAGAAGACCACCAGACAGATACAAAGATTTCATAATGGAAGATGGAGAATTCTCTTTATTGACGTTCGAGGAAGCAATTGAATCAAAAGAAAAAGAAAACTGGTTAAAAGCTATTAAAGAAGAAATGGATTCTTTAAAAGAAAATAATACATGGTCTTTAGTTGACAAGAAGGAGGCCGAAGGAAGAAAATTGGTTACAAGTAAATGGATTTTTTCTGTAAAAGCTGACGGAAGATATAAAGCTAGACTTGTTGCTAGAGGTTTTCAACAAAAATATAAAATAGATTATGATGAAACATATAGTCCGGTTATAGACACTACTTCTTTGAGAATTTTATTGTCTATTGCAGCTGATAAAGGGTTAAAATTAAAACAATTTGATATTAAGACTGCGTTTCTCCATGGAAATTTAAAGGAAACAATATATATGAAGGTTCCAAAAGGCTACAATAACTGTGAGGGCAAAGTATGCAAATTAAATAAAAGCTTATATGGTTTAAAACAGGCTCCCCTAATGTGGAATATACGTTTTACAGAATTTTTATCAGAAATTGGTTTCAGACAATTGAAATTAAATAAATGTATATTCATTTTAGATATGACAGAAAATAAAAGAATCTATTTAGGAATTTATGTAGATGACGGAATAATAATCGGCGAAAATTTGAAAGATTTAGAGGAAATTATAAATAAATTGAAAAAAGAATTTGATTTAAGGGTTTCTGAGAGAGTATCTAATTATATTGGTTTAGAAATCGAGACAGAAAAGAGTGGTATTAAATTACATCAACAAAAATATTCGGAGAAATTATTACAAAAATTTAATATGAACAATGTGAGAGATTGCAACTACCCGAGTATTTTGGTGGAGCAACATCCATCAGTCAAAGTCGATAAGAAAATGCACGAAGACTATAGAGAAATGGTAGGTTCTCTGCTTTATCTCTCAAACAAAACAAGACCTGACATTAGTTTTCACGTAGGCTATTGTTCAAGGCATCAAAACAGTCCAAATTTAAATGATTTAAACAATGTTAAAAATATTTTGAGGTTTATTAAAAGTTCAAAAGAAAAAGGTATTCATTACAGTAAAGGTGACAATATATTGAGAGGTTTTTGTGATTCTGATTTCGCTGGTGATCCTGACACGAGACGAAGTACTTCTGGTTTTGTGATCTGGATGAATGGTGGACCAATTGCATGGAGCTCAAGAAAACAATCAGTTGTGGCACTTTCGAGCACTGAAGCTGAGTATATTGCTGCTGCAGAATGCTGTAAGGAACTGCTATATATTAGAGATCTGGTAAAAGAAATTACGAATGAAAATTTGGATATTGAAATGCGAGTTGACAACCAATCTGCGATTTGGCTTATGAAGAAAGGAATTATGAATAAAAGAAGCAAACACATTGATGTTAAATATTACTACCTTAAAGAAAAGATTGATGAAAACCAGATTAAAGTTAAATACTGTCCAACTGGGTCACAGATTGCGGATATTCTAACGAAAAGTTTACCCAGGATAAAGTTTGAAAGCTTTGAGAAGGAGATAAAGGAGTTTAAAGGTAATAGAGTCAAAAAGGAGTTAAAGGTTAGAGTCAAAAAGGAGTTAAAGGTTAGAGTCGAGAAGGAGTTAAGGGTTAGAGTCGAGAAGGAGTTAAGGGTTAGAGTCGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGAGTTAAAGGTTATTAAAGAGGTTGAGAAGGCGTTAAAGGTTATTAAAGAGGTGGAGAAGGCGTTTAAGGTTATTAAAGAGGTTGAGAAGGCGTTTAAGTGCGTAGTTTTCGATGAAGAATTAGACAGGCAAGCGCCAATACACTTTCTCGTAGTACCGAAGAAGGTAATTCCAGTCATGTCGGAAGCATCAGTGGATGACGAAAAAATTATTGGTCACCTCTTATTGGTTGCAAATGAAGTAGCCACAAAAAAAGGATTATACCGACAAGGATACCACGTGTTTTTAGATGAGAATCACAAAATAATGAAATTGAAAGCTCTTCACGTATTCGGACGAGCTTTACATCACATGGTCTGGCCGAGCGGTCCGGGGGCGAGACTTTAA
Protein
MEKTRALLLDGAVPKYLWGEALLTASFLLNRCPTKGKNKTPAELWFGIKPDVSNIRRFGSTTYFKINSGLKKLDDRCKKGILVGYVRNGYKIWVEDEQKIIRARDVRINEGEQGILGGYLEDNEVINGLWGDERENTNRNNTNENNRADDEVREVREGDFRGNNSNGVNEVREDVVIRQNNRGRNENRVERGRIINIEETNIFSETNEDETIEGETNDRGTNANEKNENGTNDSPLTNENLVETLRSNDDMDEREEFLDSENTEGINEQVLENTRTGRPQRNRRPPDRYKDFIMEDGEFSLLTFEEAIESKEKENWLKAIKEEMDSLKENNTWSLVDKKEAEGRKLVTSKWIFSVKADGRYKARLVARGFQQKYKIDYDETYSPVIDTTSLRILLSIAADKGLKLKQFDIKTAFLHGNLKETIYMKVPKGYNNCEGKVCKLNKSLYGLKQAPLMWNIRFTEFLSEIGFRQLKLNKCIFILDMTENKRIYLGIYVDDGIIIGENLKDLEEIINKLKKEFDLRVSERVSNYIGLEIETEKSGIKLHQQKYSEKLLQKFNMNNVRDCNYPSILVEQHPSVKVDKKMHEDYREMVGSLLYLSNKTRPDISFHVGYCSRHQNSPNLNDLNNVKNILRFIKSSKEKGIHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYIAAAECCKELLYIRDLVKEITNENLDIEMRVDNQSAIWLMKKGIMNKRSKHIDVKYYYLKEKIDENQIKVKYCPTGSQIADILTKSLPRIKFESFEKEIKEFKGNRVKKELKVRVKKELKVRVEKELRVRVEKELRVRVEKELKVIKEVEKELKVIKEVEKALKVIKEVEKAFKVIKEVEKAFKCVVFDEELDRQAPIHFLVVPKKVIPVMSEASVDDEKIIGHLLLVANEVATKKGLYRQGYHVFLDENHKIMKLKALHVFGRALHHMVWPSGPGARL
Summary
Uniprot
ProteinModelPortal
PDB
5KM9
E-value=2.0554e-11,
Score=170
Ontologies
GO
Topology
Length:
979
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.2076
Exp number, first 60 AAs:
0.20742
Total prob of N-in:
0.00929
outside
1 - 979
Population Genetic Test Statistics
Pi
403.800635
Theta
183.121989
Tajima's D
4.288992
CLR
0
CSRT
0.999600019999
Interpretation
Uncertain
