SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00784
Pre Gene Modal
BGIBMGA009705
Annotation
PREDICTED:_uncharacterized_protein_LOC101742758_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.115
 

Sequence

CDS
ATGGATCGGACCGACGACCTCTGTGTGACGTTTCAGCGGGTATTGGAGACTTGTGTCCAGGATCACGACTACAACCTCACTGTTGCCACCAATGAAGACGAAACAAGTTGCGCTGTTTTAGAGAAGATACCCAGGGCTGGAAAACGAAATGCTGAAGCTGAGGTCTCAGATTCGTCATCTAACAGTTGCGAGATGGATACCAGGAGTAGAGCCGAGGGAGAGCCGGGCACGTCCGGTACCCCCCAGACAGCGTCGGAGCTTTTATTGCCTTTAAAACGAATCGATTTCAAACTCGGCTCGAACAGGTCGGACATTGACAGTGTCGGTGACAGTAAACCAGTCAAGCCGAAATATCGGCTGGGCAGGTGGCAAATAAAATTACTAAACGACATGTCCGTCCCGGTAAAGTGCAATAAGGCTTTGAAGATGATGGAAAATATGGGATGGAACGGTGGAGCCCTGGGAGCGAGGGGCAATGGGATAACAGAGCCATTGGTACCTCAGCTCAGAATGGCATCAGGCACCGGCTTAGGGCACACGCCGTCTACATCTCGACCCGAACCCGCGACCAAGTCCGCCTTCAGACAGGACCAGCTAAACCTAATCCTGTACCTCCTGATTAACGACTTGGACGAAACGAAAGCTCACTACAAGAGGCAGCTGAAGAAGAAGGAGATGAGCTTCATCGATCACGCCCTGACAGCTGTCAATAACAGGCTCAAGTTCAATCTGTCGCAGCCGGAGGAGACGGGTCTAATGTTGAAGATCCTCGATCAGTTGGTCGGTGTGCCCCACGTGCGGTTTGTGGCTTTCGTCTCTAAAGACAGAAAGCAACTCAAAATTAAAAAGATCACTAAAACACATTCCTACGACGAGAAGATAAGTAAATCTATGATAAAGGACATCGCCGATACCATAATATCGGGCGAACAAACCGACTCACGCGTTACCAGCGATGTTTACAAGAAGATCTTGGATAGACTGATCCTGCCGTACGGCCCGAGTTTCTACCCGAAGAAAACGATAAACGAGTTATCATTCAAAACTACCATTTTGGTAGAAATAATGCAGTTCGCAAGGAGTTCCGTTATCGAGCGCTCGTTAAACTTCGAATCGACTTTGACTCGGTCCGAGAGAGCGTTTGTGAGTCAAGCCGTGCTACAGTTGAACAAACGAAGCGGGTCCTTGAAGGATTCCTTCCTGCGGCTCGTGTATACCGTGACGCAGGAGTGCGTCGGGAAGCTGTATTTAGATGCCGCCTTTGCCGACAATGACTACACCGTGGTCCTGCGCAAGATAAACAGGACCTTATTCAATGCCAACGAGAAACGTCCTTCTGAACTTAAGAAGGATAACAAGGCAATATACAGGAATCACGCTGTTGCCTACGATCCTATATTCGGAGAGCGTGACGAATCTGACAGTGTCGAGGAGGACGCGGGAGACTCCGAGAACCCTGATGCAGCGGAAGACGCTTCGCACGGAGCGTCCGCGTCCACTTCCGTAGCCGTAGCTCCGAATCCGGCAACACCGAGCCCGTCCCGCCCCAAAGGGAAAAAACGCAAAAACTACCAAAAAGTGTTGCTGTTGCCGAAAAATCATCCGGACGAGGTCCTCGATAACGGTTTCCTGCTCAAAATACATTCGGTGCTTGCCTCGAGGCCTACGGATTTGGACGATCAAGGCCTGAAATGCCACGGCATTTATAACGGCGGTTTGGTTCTGTGTTGCCACAGCGAAAACGGCTACTATTGGCTCAGGGAGGCCTGTGATGCGAACGAGATATCGGTGTTGGACGTGAAACGCGTCTCGACTGATAATAATATAAAAATGTCGTTGAAAATACACGTCGATAAAATGGTTAATTTGGATGTGGATTGCGCGTGCGGTCTGCTAAGATCCTTGACCGCGCACAATAAGGGTTTGCGCTCCAAGCGATGGTCCGTGGTCGGACGACAGCAATCCTACGAATTTAACTTCGTCCTGCTGACAATCGAGATAGACGTGAAATCGTTCAATTACCTACTAAATTCGGGATTCGTTTTGAACGCTGGCAATTATACGTACGAATTTAGTTATCTGTGCGATTGA
Protein
MDRTDDLCVTFQRVLETCVQDHDYNLTVATNEDETSCAVLEKIPRAGKRNAEAEVSDSSSNSCEMDTRSRAEGEPGTSGTPQTASELLLPLKRIDFKLGSNRSDIDSVGDSKPVKPKYRLGRWQIKLLNDMSVPVKCNKALKMMENMGWNGGALGARGNGITEPLVPQLRMASGTGLGHTPSTSRPEPATKSAFRQDQLNLILYLLINDLDETKAHYKRQLKKKEMSFIDHALTAVNNRLKFNLSQPEETGLMLKILDQLVGVPHVRFVAFVSKDRKQLKIKKITKTHSYDEKISKSMIKDIADTIISGEQTDSRVTSDVYKKILDRLILPYGPSFYPKKTINELSFKTTILVEIMQFARSSVIERSLNFESTLTRSERAFVSQAVLQLNKRSGSLKDSFLRLVYTVTQECVGKLYLDAAFADNDYTVVLRKINRTLFNANEKRPSELKKDNKAIYRNHAVAYDPIFGERDESDSVEEDAGDSENPDAAEDASHGASASTSVAVAPNPATPSPSRPKGKKRKNYQKVLLLPKNHPDEVLDNGFLLKIHSVLASRPTDLDDQGLKCHGIYNGGLVLCCHSENGYYWLREACDANEISVLDVKRVSTDNNIKMSLKIHVDKMVNLDVDCACGLLRSLTAHNKGLRSKRWSVVGRQQSYEFNFVLLTIEIDVKSFNYLLNSGFVLNAGNYTYEFSYLCD

Summary

Uniprot
Pfam
PF16012   DUF4780        + More
PF01585   G-patch
Interpro
IPR031961   DUF4780        + More
IPR000467   G_patch_dom       
ProteinModelPortal

Ontologies

Topology

Length:
696
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04176
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00073
outside
1  -  696
 
 

Population Genetic Test Statistics

Pi
216.692618
Theta
147.425585
Tajima's D
1.411488
CLR
0.029071
CSRT
0.767411629418529
Interpretation
Uncertain
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