Gene

KWMTBOMO00783  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009726

Annotation

translin_[Bombyx_mori]

Location

Bomo_Chr2(+):2905255-2911849      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.616

CDS

ATGTGCGATAATGAATTGATCAATAAAATATTCAGTGACTTCCAAAAGAATCTCGACCAAGAACAAGAACTACGCGAGACGATTCGGACTATATGTAAAGAGGTTGACCAAATTTCTCGGGAAGCGACCACAGTGCTCCAAGTAATACACTACAATGAAGCCGGCATTGCTCCGGCATGTGGCAAAGCTCGTCTACTTTTCGAGAAGGCCCACGATGGATACGCAAGACTGAAAGATGCTGTACCACCAACCGATTACTTCAAGTATCAGGATCACTGGAGATTCATGACCCAACGCTACTGTTATCTGATAGCGCTCACTATATGGCTAGAGAAGGGAATCCTGGCTTCACACGAGACCATGGCTGAAATATTAGGTGTTAGTCCAGTGGAGTTAAAAGAAGGTTTCCATTTGGACATTGAAGACTATCTGATTGGGCTATTGACGATGTGCTCAGAATTGTCTCGTCTGGCCGTGAACTCGGTGACCCGCGGCGACTACGAGCGCCCCCTGAGGATCTCCAAGTTCGTGATGGAACTGAACGCCGGCTTCAGGCTATTGAACTTGAAGAACGATCATTTGCGCAAACGCTTCGACGCCCTAAAGTACGACGTGAAGAAAATAGAGGAAGTCGTCTACGATCTCAGCATCAGGGGGCTGCTGCCCAAGGGCGATGCGGACCACGGACCAGAACACGAACATAAATAA

Protein

MCDNELINKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAPACGKARLLFEKAHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKKIEEVVYDLSIRGLLPKGDADHGPEHEHK

Uniprot

Q2F5K2   H9JJM5   S4PMD3   A0A194PUP6   A0A194QZB0   A0A2H1WHR0   + More
A0A1Y1KTW1   A0A182QKR4   A0A182MM13   A0A1W4XBM6   A0A182RN11   A0A067RB54   A0A182WKD1   B0WRW5   Q17D78   A0A1Q3F871   Q16YK8   A0A182HLZ4   A0A182X545   Q7Q729   A0A182VCF5   A0A182NM35   A0A182TR11   A0A182PP51   A0A2M3ZI43   A0A182LJG0   A0A2M4CV01   A0A2M4CV77   A0A182FHX5   A0A182JY27   A0A182J7D9   A0A2J7RQ88   A0A2M3Z8E3   A0A2M3Z8J1   A0A1B0EZ92   A0A182Y107   A0A1B0CQW3   D6WQ79   A0A2M4AKF2   T1E7W8   A0A1L8DDM0   A0A0M4ET37   V5GD89   A0A2M4BYA3   A0A2M4BYJ7   Q28XI6   A0A3B0J098   A0A2P8Z1Y4   U5ESR5   B4GG64   B4P870   A0A0K8TRS2   A0A023EMY0   B3MI45   Q7JVK6   A0A023EKK5   B4KN37   B4MIQ4   B4QAJ9   T1PGB7   B3NN86   A0A1L8DBN3   A0A1I8M9U2   B4J7R1   A0A1W4VPT1   N6TIM3   A0A1L8EBG4   B4LKM0   J3JTG6   A0A0A1XG66   A0A0K8WCU8   A0A034WGZ0   A0A0C9R0J6   A0A1B0AHR0   E2AUJ8   A0A0J7L1R2   A0A1A9WJ07   A0A1I8PZR4   T1JBZ9   A0A0M5J5R7   A0A1A9V5B9   A0A1A9Y2Y9   A0A1B0B080   D3TPR8   A0A0L0BTV3   A0A224YY80   A0A131YF88   A0A336KXM7   A0A154P380   E9G7I9   A0A023FXU5   A0A232EYF1   A0A1E1XCB5   A0A131XPB7   A0A1Z5LEV7   E2C3G6   A0A0P5JV50   A0A0P5NLT6   A0A0N8BSK8   A0A0P5IAX7  

Pubmed

19121390    23622113    26354079    28004739    24845553    17510324    + More
12364791    14747013    17210077    20966253    25244985    18362917    19820115    15632085    17994087    29403074    17550304    26369729    24945155    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    18647346    21552261    23650579    26109357    26109356    22936249    25315136    23537049    22516182    25830018    25348373    20798317    20353571    26108605    28797301    26830274    21292972    28648823    28503490    28049606    28528879   

EMBL

DQ311421    ABD36365.1    BABH01017401    BABH01017402    GAIX01003620    JAA88940.1    + More
KQ459593    KPI96469.1    KQ460890    KPJ10878.1    ODYU01008722    SOQ52567.1    GEZM01076801    GEZM01076800    GEZM01076799    JAV63640.1    AXCN02002327    AXCM01013109    KK852811    KDR15893.1    DS232061    EDS33530.1    CH477298    EAT44351.1    GFDL01011342    JAV23703.1    CH477515    EAT39699.1    APCN01004280    AAAB01008960    EAA11822.4    GGFM01007430    MBW28181.1    GGFL01004989    MBW69167.1    GGFL01004987    MBW69165.1    NEVH01001345    PNF43004.1    GGFM01004043    MBW24794.1    GGFM01004059    MBW24810.1    AJVK01070341    AJWK01024121    KQ971354    EFA07522.2    GGFK01007891    MBW41212.1    GAMD01002687    JAA98903.1    GFDF01009617    JAV04467.1    CP012524    ALC40612.1    GALX01000331    JAB68135.1    GGFJ01008851    MBW57992.1    GGFJ01008850    MBW57991.1    CM000071    EAL26330.2    OUUW01000001    SPP74115.1    PYGN01000237    PSN50504.1    GANO01002240    JAB57631.1    CH479183    EDW35484.1    CM000158    EDW90117.1    GDAI01001008    JAI16595.1    JXUM01102070    JXUM01111582    GAPW01003889    KQ565518    KQ564697    JAC09709.1    KXJ70906.1    KXJ71879.1    CH902619    EDV38055.1    AE013599    AY118870    AAF58784.1    AAM50730.1    GAPW01003890    JAC09708.1    CH933808    EDW08864.1    CH963719    EDW71993.1    CM000362    CM002911    EDX06504.1    KMY92802.1    KA647852    AFP62481.1    CH954179    EDV56606.1    GFDF01010208    JAV03876.1    CH916367    EDW01117.1    APGK01036455    KB740940    KB632083    ENN77678.1    ERL88621.1    GFDG01002699    JAV16100.1    CH940648    EDW61743.1    BT126522    AEE61486.1    GBXI01004330    JAD09962.1    GDHF01003306    JAI49008.1    GAKP01004121    JAC54831.1    GBYB01006452    JAG76219.1    GL442829    EFN62892.1    LBMM01001376    KMQ96419.1    JH432044    CP012528    ALC48218.1    JXJN01006587    CCAG010001240    EZ423420    ADD19696.1    JRES01001351    KNC23441.1    GFPF01007788    MAA18934.1    GEDV01010524    JAP78033.1    UFQS01001192    UFQT01001192    SSX09620.1    SSX29416.1    KQ434796    KZC05804.1    GL732534    EFX84471.1    GBBL01001805    JAC25515.1    NNAY01001630    OXU23375.1    GFAC01002340    JAT96848.1    GEFH01000593    JAP67988.1    GFJQ02001150    JAW05820.1    GL452320    EFN77504.1    GDIQ01193225    JAK58500.1    GDIQ01150692    JAL01034.1    GDIQ01248163    GDIQ01148995    JAL02731.1    GDIQ01217172    JAK34553.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000075886    UP000075883    UP000192223    + More
UP000075900    UP000027135    UP000075920    UP000002320    UP000008820    UP000075840    UP000076407    UP000007062    UP000075903    UP000075884    UP000075902    UP000075885    UP000075882    UP000069272    UP000075881    UP000075880    UP000235965    UP000092462    UP000076408    UP000092461    UP000007266    UP000092553    UP000001819    UP000268350    UP000245037    UP000008744    UP000002282    UP000069940    UP000249989    UP000007801    UP000000803    UP000009192    UP000007798    UP000000304    UP000008711    UP000095301    UP000001070    UP000192221    UP000019118    UP000030742    UP000008792    UP000092445    UP000000311    UP000036403    UP000091820    UP000095300    UP000078200    UP000092443    UP000092460    UP000092444    UP000037069    UP000076502    UP000000305    UP000215335    UP000008237   

PRIDE

Q2F5K2    H9JJM5    Q7JVK6   

Pfam

PF01997   Translin        + More
PF10203   Pet191_N

Interpro

IPR033956   Translin        + More
IPR016069   Translin_C       
IPR002848   Translin_fam       
IPR016068   Translin_N       
IPR036081   Translin_sf       
IPR018793   Cyt_c_oxidase_assmbl_Pet191       

SUPFAM

SSF74784   SSF74784       

Gene 3D

1.20.58.190     1.20.58.200    

CDD

cd14819  Translin

ProteinModelPortal

Q2F5K2   H9JJM5   S4PMD3   A0A194PUP6   A0A194QZB0   A0A2H1WHR0   + More
A0A1Y1KTW1   A0A182QKR4   A0A182MM13   A0A1W4XBM6   A0A182RN11   A0A067RB54   A0A182WKD1   B0WRW5   Q17D78   A0A1Q3F871   Q16YK8   A0A182HLZ4   A0A182X545   Q7Q729   A0A182VCF5   A0A182NM35   A0A182TR11   A0A182PP51   A0A2M3ZI43   A0A182LJG0   A0A2M4CV01   A0A2M4CV77   A0A182FHX5   A0A182JY27   A0A182J7D9   A0A2J7RQ88   A0A2M3Z8E3   A0A2M3Z8J1   A0A1B0EZ92   A0A182Y107   A0A1B0CQW3   D6WQ79   A0A2M4AKF2   T1E7W8   A0A1L8DDM0   A0A0M4ET37   V5GD89   A0A2M4BYA3   A0A2M4BYJ7   Q28XI6   A0A3B0J098   A0A2P8Z1Y4   U5ESR5   B4GG64   B4P870   A0A0K8TRS2   A0A023EMY0   B3MI45   Q7JVK6   A0A023EKK5   B4KN37   B4MIQ4   B4QAJ9   T1PGB7   B3NN86   A0A1L8DBN3   A0A1I8M9U2   B4J7R1   A0A1W4VPT1   N6TIM3   A0A1L8EBG4   B4LKM0   J3JTG6   A0A0A1XG66   A0A0K8WCU8   A0A034WGZ0   A0A0C9R0J6   A0A1B0AHR0   E2AUJ8   A0A0J7L1R2   A0A1A9WJ07   A0A1I8PZR4   T1JBZ9   A0A0M5J5R7   A0A1A9V5B9   A0A1A9Y2Y9   A0A1B0B080   D3TPR8   A0A0L0BTV3   A0A224YY80   A0A131YF88   A0A336KXM7   A0A154P380   E9G7I9   A0A023FXU5   A0A232EYF1   A0A1E1XCB5   A0A131XPB7   A0A1Z5LEV7   E2C3G6   A0A0P5JV50   A0A0P5NLT6   A0A0N8BSK8   A0A0P5IAX7  

PDB

4DG7     E-value=1.34974e-68,     Score=657

KEGG

692980    no KO assigned | (RefSeq) translin

GO

GO:0003697   GO:0016070   GO:0043565   GO:0003723   GO:0016021   GO:0005737   GO:0005634   GO:0004521   GO:0042321   GO:0042803   GO:0050821   GO:0005829   GO:0016246   GO:0042595   GO:0042802   GO:0006260   GO:0006418   GO:0006559   GO:0004887  

PANTHER

PTHR10741   PTHR10741:SF2  

Length:

235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.41176

Exp number, first 60 AAs:

0.00061

Total prob of N-in:

0.11305

outside

1  -  235

 

 

Pi

250.432925

Theta

184.797214

Tajima's D

0.981214

CLR

0.087392

CSRT

0.656867156642168

Interpretation

Uncertain