Gene

KWMTBOMO00778

Pre Gene Modal

BGIBMGA009725

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Bombyx_mori]

Location

Bomo_Chr2(+):2864995-2868769      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.92

CDS

ATGGACCCCGGAGTCTGCCAGATATCTCCTAGAAGTCGGACGGGAAGTGGACGCGATGGTAGTCTATCAGTGACGTACCGTTTCCAGTTCTGGCAGTCGTTCTTCCAGCTGTTCTCGGGCGCGCACCGCCGCACCACCGTCTCGCTCGGGGGCACGCTGCTCTTCGCCATGGCGATACAGTTCTACCTGTCGTCGTACGTTCCGTCGACGGTGGGCAGTATAGAAAGCGAGCGCTTCGAGGCGTCGCGCGTGGTGGTGCGCAACGAGACGCTGGTGGCGCGTCACTACCGCGGCACCGTGCAGAACGTGCACTACGCGAACGTGTCGTTCGTCGACTGCACGTTCCGCGACGTGCTGCTCTCGCACGTGCGCTTCCGCAACTGCTCATTCACGAACGTGTCGCTGTTGAACATCAAGAGCTCGCACACTCACTTCGAGGGCTGCCTCTTCGTCAATAGCAGGTGA

Protein

MDPGVCQISPRSRTGSGRDGSLSVTYRFQFWQSFFQLFSGAHRRTTVSLGGTLLFAMAIQFYLSSYVPSTVGSIESERFEASRVVVRNETLVARHYRGTVQNVHYANVSFVDCTFRDVLLSHVRFRNCSFTNVSLLNIKSSHTHFEGCLFVNSR

Uniprot

H9JJM4   A0A194PUQ1   A0A2A4IYC9   A0A194QZB5   A0A2A4J0J8   A0A212EK64   + More
S4P4W4   A0A2A3EHE2   V9IL34   A0A088AMH1   A0A310SLR5   K7J3C7   A0A232FFJ3   A0A0P5MRS7   A0A0P5HAK8   A0A0P5HD80   A0A0N8B7B4   A0A0P5Y4D6   A0A0P6A3A3   A0A162CL91   E2C3G5   A0A0N7ZN33   A0A0P5CBW4   A0A2R7WLH0   E9HR40   A0A2P2I7F4   F6YVN0   X1WCQ3   E4YDT3   A0A3N0Z7Y7   G1KHP7   A0A0Q3PW67   H2SG74   A0A1W4X6F9  

Pubmed

19121390    26354079    22118469    23622113    20075255    28648823    + More
20798317    21292972    17495919    23594743    21097902    21551351   

EMBL

BABH01017395    BABH01017396    BABH01017397    KQ459593    KPI96474.1    NWSH01005475    + More
PCG64172.1    KQ460890    KPJ10883.1    NWSH01004292    PCG65266.1    AGBW02014329    OWR41855.1    GAIX01007481    JAA85079.1    KZ288248    PBC31137.1    JR052703    AEY61760.1    KQ762882    OAD55375.1    NNAY01000313    OXU29290.1    GDIQ01154420    JAK97305.1    GDIQ01229248    JAK22477.1    GDIQ01251426    JAK00299.1    GDIQ01205747    JAK45978.1    GDIP01076178    JAM27537.1    GDIP01034901    JAM68814.1    LRGB01001005    KZS14116.1    GL452320    EFN77503.1    GDIP01229273    JAI94128.1    GDIP01172754    JAJ50648.1    KK855040    PTY20463.1    GL732731    EFX65790.1    IACF01004236    LAB69830.1    CR854891    FN654438    CBY33683.1    RJVU01006614    ROL54567.1    LMAW01002533    KQK80348.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000242457    + More
UP000005203    UP000002358    UP000215335    UP000076858    UP000008237    UP000000305    UP000002280    UP000000437    UP000001646    UP000051836    UP000005226    UP000192223   

PRIDE

H9JJM4   

Pfam

PF13599   Pentapeptide_4        + More
PF00083   Sugar_tr
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR001646   5peptide_repeat       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR022308   SV2       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JJM4   A0A194PUQ1   A0A2A4IYC9   A0A194QZB5   A0A2A4J0J8   A0A212EK64   + More
S4P4W4   A0A2A3EHE2   V9IL34   A0A088AMH1   A0A310SLR5   K7J3C7   A0A232FFJ3   A0A0P5MRS7   A0A0P5HAK8   A0A0P5HD80   A0A0N8B7B4   A0A0P5Y4D6   A0A0P6A3A3   A0A162CL91   E2C3G5   A0A0N7ZN33   A0A0P5CBW4   A0A2R7WLH0   E9HR40   A0A2P2I7F4   F6YVN0   X1WCQ3   E4YDT3   A0A3N0Z7Y7   G1KHP7   A0A0Q3PW67   H2SG74   A0A1W4X6F9  

KEGG

101743808    K06258 MFS transporter, VNT family, synaptic vesicle glycoprotein 2 | (RefSeq) synaptic vesicle glyc

GO

GO:0016021   GO:0022857   GO:0055085   GO:0005215   GO:0007268   GO:0043005   GO:0030672  

Length:

154

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.42252999999999

Exp number, first 60 AAs:

6.48173

Total prob of N-in:

0.23595

outside

1  -  154

 

 

Pi

150.916052

Theta

143.452938

Tajima's D

0.603174

CLR

0.001304

CSRT

0.545472726363682

Interpretation

Uncertain