Gene

KWMTBOMO00777

Pre Gene Modal

BGIBMGA009725

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Bombyx_mori]

Location

Bomo_Chr2(+):2855165-2861845      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.805

CDS

ATGGAAGAGGAACAAGCATGGCTTGTCCGAACGCGTTCCGACTCTGAGACATCCTCAAAGTTGAGCTTCGGTTCACTGTCACGGACAATGACATACACAGAGCACCGGCTCTCTGCTGGAGCCGAAGCGGCTGGTGAGCCAGGCAACACTATCACAATGGCATCCAGTCCTCCGGACAACGCGACTGAGGGAAACGAAAGCGGCGAGCTCCTAGACTACAATGACTCTAGTATTCTCGAACAATTCCATGAAGATGCCCTAAGACAGACTGGCTGTGGTCTCTCCCAAGTTCGAATAGTCCTGTCCGTGGGCCTGGCAGTGGCCGGTGCCACATTGGAGCTGGCAGCCATACCTTTCATCCTGCCATCAGCGGAGATAGAACTGTGTATACTGTTACACGAGAAAAATTGGCTCGTAATGATAACGCTGGTGGGTTGGGCCTTCGGTGCTCTGGGGTGGGGCGCCCTGGCTGAGAGACTTGGCCGACGTCGAACCTTGCTCTCATGTTTGGCGGTGAATGCGGTTTTTGCTGCCATAGCAGCGTTCATGCCGACCTACGGAACCTTTATGATGGCGAGGTATATATTTTTGCGTGTGTAA

Protein

MEEEQAWLVRTRSDSETSSKLSFGSLSRTMTYTEHRLSAGAEAAGEPGNTITMASSPPDNATEGNESGELLDYNDSSILEQFHEDALRQTGCGLSQVRIVLSVGLAVAGATLELAAIPFILPSAEIELCILLHEKNWLVMITLVGWAFGALGWGALAERLGRRRTLLSCLAVNAVFAAIAAFMPTYGTFMMARYIFLRV

Uniprot

H9JJM4   A0A194QZB5   A0A194PUQ1   A0A212EK64   A0A1E1W6N6   A0A2A4J0J8   + More
Q172I7   A0A1S4FGC1   A0A2J7RMH4   A0A182G757   A0A0L7RD41   A0A158P2Y7   A0A3L8DRS8   A0A154P1L2   A0A310SLR5   A0A088AMH1   K7J3C7   A0A2A3EHE2   V9IL34   A0A336M2B9   A0A195BPW3   A0A026WUI8   A0A195EZX5   A0A151WYL8   A0A195DNH2   A0A151IIU7   A0A0M9A8W9   T1J4J4   A0A2P6L5K6   A0A0N8DP28   C3YDP3   A0A315UU61   H2SG74   A0A3P9HRP2   A0A3P9JXK1   A0A3P9LMB4   A0A3P9HRK8   H2LD56   V9KKV0   A0A3B3SCS4   A0A3B3SAQ4   A0A1S3RVB6   A0A0S7M2P7   A0A3P8U9N4   A0A3P8U0M1   A0A1W4ZBR1   H0VCM6   H0WTU1   A0A2I4B7U7   A0A287DE25   I3M843   A0A3B3QZF4   A0A1W4YL07  

Pubmed

19121390    26354079    22118469    17510324    26483478    21347285    + More
30249741    20075255    24508170    18563158    29703783    21551351    17554307    24402279    29240929    21993624   

EMBL

BABH01017395    BABH01017396    BABH01017397    KQ460890    KPJ10883.1    KQ459593    + More
KPI96474.1    AGBW02014329    OWR41855.1    GDQN01008435    GDQN01005132    JAT82619.1    JAT85922.1    NWSH01004292    PCG65266.1    CH477436    EAT40939.1    NEVH01002555    PNF42033.1    JXUM01007299    KQ560237    KXJ83668.1    KQ414615    KOC68676.1    ADTU01007647    QOIP01000005    RLU23155.1    KQ434796    KZC05829.1    KQ762882    OAD55375.1    KZ288248    PBC31137.1    JR052703    AEY61760.1    UFQS01000301    UFQT01000301    SSX02629.1    SSX23003.1    KQ976432    KYM87534.1    KK107099    EZA59677.1    KQ981905    KYN33462.1    KQ982649    KYQ52984.1    KQ980713    KYN14381.1    KQ977459    KYN02570.1    KQ435711    KOX79617.1    JH431845    MWRG01001666    PRD33865.1    GDIP01014823    JAM88892.1    GG666504    EEN61512.1    NHOQ01002733    PWA15162.1    JW866058    AFO98575.1    GBYX01124358    JAO96049.1    AAKN02031353    AAQR03162486    AGTP01066135   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000008820    + More
UP000235965    UP000069940    UP000249989    UP000053825    UP000005205    UP000279307    UP000076502    UP000005203    UP000002358    UP000242457    UP000078540    UP000053097    UP000078541    UP000075809    UP000078492    UP000078542    UP000053105    UP000001554    UP000005226    UP000265200    UP000265180    UP000001038    UP000261540    UP000087266    UP000265080    UP000192224    UP000005447    UP000005225    UP000192220    UP000005215   

PRIDE

H9JJM4   

Pfam

PF13599   Pentapeptide_4        + More
PF00083   Sugar_tr
PF07690   MFS_1
PF00805   Pentapeptide

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR001646   5peptide_repeat       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR022308   SV2       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JJM4   A0A194QZB5   A0A194PUQ1   A0A212EK64   A0A1E1W6N6   A0A2A4J0J8   + More
Q172I7   A0A1S4FGC1   A0A2J7RMH4   A0A182G757   A0A0L7RD41   A0A158P2Y7   A0A3L8DRS8   A0A154P1L2   A0A310SLR5   A0A088AMH1   K7J3C7   A0A2A3EHE2   V9IL34   A0A336M2B9   A0A195BPW3   A0A026WUI8   A0A195EZX5   A0A151WYL8   A0A195DNH2   A0A151IIU7   A0A0M9A8W9   T1J4J4   A0A2P6L5K6   A0A0N8DP28   C3YDP3   A0A315UU61   H2SG74   A0A3P9HRP2   A0A3P9JXK1   A0A3P9LMB4   A0A3P9HRK8   H2LD56   V9KKV0   A0A3B3SCS4   A0A3B3SAQ4   A0A1S3RVB6   A0A0S7M2P7   A0A3P8U9N4   A0A3P8U0M1   A0A1W4ZBR1   H0VCM6   H0WTU1   A0A2I4B7U7   A0A287DE25   I3M843   A0A3B3QZF4   A0A1W4YL07  

KEGG

101743808    K06258 MFS transporter, VNT family, synaptic vesicle glycoprotein 2 | (RefSeq) synaptic vesicle glyc

GO

GO:0016021   GO:0022857   GO:0055085   GO:0005215   GO:0007268   GO:0030672   GO:0043005   GO:0008021   GO:0019901   GO:0016082   GO:0005911   GO:0048786   GO:0006874   GO:0031594   GO:0005783   GO:0098978   GO:0098982   GO:0003677   GO:0005634   GO:0006260   GO:0006418   GO:0005737   GO:0006559   GO:0004887  

Length:

199

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

66.30396

Exp number, first 60 AAs:

0

Total prob of N-in:

0.99438

inside

1  -  98

TMhelix

99  -  121

outside

122  -  135

TMhelix

136  -  157

inside

158  -  169

TMhelix

170  -  192

outside

193  -  199

 

 

Pi

282.030297

Theta

169.581016

Tajima's D

1.537879

CLR

0.005964

CSRT

0.795210239488026

Interpretation

Uncertain