Gene

KWMTBOMO00775

Pre Gene Modal

BGIBMGA009724

Annotation

PREDICTED:_putative_ammonium_transporter_2_[Papilio_machaon]

Location

Bomo_Chr2(+):2829155-2844359      View in EpiBrowser

Full name

Ammonium transporter      

Location in the cell

PlasmaMembrane   Reliability : 3.597

CDS

ATGGATCCGAACTGGACCCACGTTGGACTTCGGTCACCTAACCTCACGAACACTACAGTGAACCTTCAGGAGAACTTCGAGATCGACTTAGAAGATACAAACTGGATTTTGACTTCGTCTTTCATCATCTTCACAATGCAGACTGGTTTCGGCATGTTGGAATCCGGTTGCGTTTCCATTAAGAACGAGGCCAACATTATGATGAAGAATATGGCTGATATATCGCTCGGGGGTCTCACCTACTGGATATTCGGTTACGGGCTCTCATTCGGCGAGAGCTCCTACTCCAATCCGTTCGTTGGTACTGGAGACTTCCTACTTGATCCTCCAGTGGGAGACGCGCTGATGGGTCCAGTGTTCGCTTCGTTTCTCTTCCAGCTGTCCTTCGCCACCACTGCGACTACTATTGTCAGTGGCGCGATGGCTGAACGGTGTAACTTCAAAGCGTACTGCGTTTTCTCGTTTCTAAACACGATCGTGTACTGCGTCCCAGCCGGCTGGGTGTGGGGCTCGCATGGCTTCCTCAACCAGCTCGGTGCTGTGGACATCGCCGGCTCCGGCCCTGTGCACCTTGTGGGTGGATCGTCAGCTTTTGCGTCAGCTTTGATGCTGGGACCGAGACTGGGCAGGTATGCCCGGGGCACGGACCCTTTACCCCTCGGCAACCCGGTCAACGCCGCCATGGGAACGTTCGTGCTTTGGTGGGGATGGTTGGCTTTCAACTCCGGCAGCACATATGGGGTGAGCGGTGCCAAGTGGCAGTACGCAGCGAGAGCGGCCGTCATGACCATGATGGGTTCTTTCGGTGGTGGATGCTTCGGTCTACTGTTCACGCTTATCAAGAACAAAGGAAAAGCTGAGGTTATGGAGCTGATTAACAGCATCCTCGGTTCTCTGGTGTCTATAACAGCTGGCTGCTTCCTGTACCGCGCTTGGGAGTCTCTGCTGATAGGATTCATTGGTGCCGGCGTGGCTTCGGCGAGCTCGATGCTATTCGACAGACTCCGGGTCGACGACCCCGTGGGAGCTTCGGCTGTCCACGGCGCTTGCGGAATCTGGGGAGTCATAGCAGTTGGTCTATTTGCCGACAACCCTATACCGATGGAGACGACAAACGGGAGATCCGGCTTGTTCAAAGGTGGCGGCTGGTACCTCCTGGGAGTGCAGAGCCTCACCGCCGTGTGCCTGGCCGCGTGGGGCGTGCTGGTCACCATGCTGTTACTGTGGCTCATAGACAGGGTCATGCCTATACGAATGGACCCTTACAATGAGTTGCTTGGGGCCGACCTTACTGAGCACAGGATCAGGCATGGACAGGTGGGAGTGTCTCGCGCTGTGTCAGCCCTGAGGCCGTTCCGCCGCTCAAGCAGCATGGAGGAAGTCGGGACTATCGGCATCAACACCGGACACGGTCTGGTCGTCGAAAAAATCCTCAAGGCGAACAAACGTAACGAGCTCGATGGGAAGCCGCAAACCTACACGAACGAAGCGTTCGTCGCCGCAGACAGCGCCTCAACGTCGTACAAAAACAACGGACTCCTGAACAAGCGTCCCAATGGCAACGGAGACCAGCTCCACCGCACTCTAGACTCTATGATCGATGAGATTAATGGCGGGAAACGCGAAACGTCAAAAGGCGCGCGAAAAAACAATGGCGTCCCGGTGATACCAGACGAAATAAAAGGAAAAAAATTTAGGGAGTTAACGGTGACCGAACTGGATGAGTTGGGCGAAATTAATGCCGCCCAGGATAGGTTCCGGCGGAGATTCGGCGAGGAGGATTACAAGAGTGACGTTATGAGGAGTGCAACGATAACTCCTAATGTGCGGTGGATTGATTGA

Protein

MDPNWTHVGLRSPNLTNTTVNLQENFEIDLEDTNWILTSSFIIFTMQTGFGMLESGCVSIKNEANIMMKNMADISLGGLTYWIFGYGLSFGESSYSNPFVGTGDFLLDPPVGDALMGPVFASFLFQLSFATTATTIVSGAMAERCNFKAYCVFSFLNTIVYCVPAGWVWGSHGFLNQLGAVDIAGSGPVHLVGGSSAFASALMLGPRLGRYARGTDPLPLGNPVNAAMGTFVLWWGWLAFNSGSTYGVSGAKWQYAARAAVMTMMGSFGGGCFGLLFTLIKNKGKAEVMELINSILGSLVSITAGCFLYRAWESLLIGFIGAGVASASSMLFDRLRVDDPVGASAVHGACGIWGVIAVGLFADNPIPMETTNGRSGLFKGGGWYLLGVQSLTAVCLAAWGVLVTMLLLWLIDRVMPIRMDPYNELLGADLTEHRIRHGQVGVSRAVSALRPFRRSSSMEEVGTIGINTGHGLVVEKILKANKRNELDGKPQTYTNEAFVAADSASTSYKNNGLLNKRPNGNGDQLHRTLDSMIDEINGGKRETSKGARKNNGVPVIPDEIKGKKFRELTVTELDELGEINAAQDRFRRRFGEEDYKSDVMRSATITPNVRWID

Similarity

Belongs to the ammonia transporter channel (TC 1.A.11.2) family.

Uniprot

H9JJM3   A0A194R0V9   A0A194PSR8   A0A2A4IXX3   A0A2H1VMS8   B4K5V9   + More
B4N8M1   A0A0M3QYI4   A0A1S4FGF9   A0A1I8P675   Q9VFA9   B4LZZ8   B4HDZ9   B4JGC0   Q294C0   A0A1W4VMK1   A0A1A9ZY94   A0A1A9XWD0   A0A3B0KCL2   A0A034WGQ2   W8BZ14   A0A1B0BL43   A0A3B0KJK5   A0A1A9VAX2   B3MX93   B4PS70   A0A0R1E419   B3P0S7   A0A067QRF1   A0A0L0BPN5   A0A2J7QL05   A0A084W5B9   A0A182ITC2   A0A139WEF3   A0A182PF20   A0A182F835   A0A139WE35   A0A1Y1KLR8   A0A336MI61   A0A336MBT3   A0A182I898   A0A1J1IVC6   A0A026WVJ4   B4GLA6   A0A182N6G1   A0A182YIF0   A0A182VXN3   A0A3L8DRX4   A0A182LY04   A0A336MBF4   A0A151IIR9   A0A195DNA5   A0A182KMQ3   Q7Z1M1   W5J3B1   A0A182XH54   A0A182VKT6   A0A195BNC5   A0A195F008   A0A0L7RD10   A0A0M9AB20   A0A151WYM6   F4X5H3   A0A034WKT0   A0A158P2Y4   A0A1B0FPG8   A0A232FBP7   A0A1B0CI43   A0A182QEB7   E2C3G1   A0A310SJ10   K7J3D0   A0A154P1X9   A0A088AMG9   A0A2A3EHF4   E0VUA6   Q1L729   A0A2R7W7D1   B0X562   A0A1I8JUR3   T1IDW3   N6U917   A0A0J7KM20   A0A1J1HFB9   E2AUK2   A0A1D2N676   A0A2P8YM68   K1RSL2   A0A226EKZ0   A0A0K2UPY8   A0A1S3IHP3  

Pubmed

19121390    26354079    17994087    17510324    10731132    12537568    + More
12537572    12537573    12537574    16110336    17569856    17569867    15632085    23185243    25348373    24495485    17550304    24845553    26108605    24438588    18362917    19820115    28004739    24508170    25244985    30249741    20966253    12364791    14747013    17210077    20920257    23761445    21719571    21347285    28648823    20798317    20075255    20566863    23537049    27289101    29403074    22992520   

EMBL

BABH01017390    BABH01017391    BABH01017392    KQ460890    KPJ10885.1    KQ459593    + More
KPI96476.1    NWSH01005380    PCG64258.1    ODYU01003411    SOQ42145.1    CH933806    EDW15171.1    CH964232    EDW81472.1    CP012526    ALC47733.1    AE014297    AAF55151.2    CH940650    EDW67226.1    CH480815    EDW42091.1    CH916369    EDV92589.1    CM000070    EAL29044.2    OUUW01000008    SPP83939.1    GAKP01004226    JAC54726.1    GAMC01002003    JAC04553.1    JXJN01016211    SPP83938.1    CH902629    EDV35316.1    CM000160    EDW97490.2    KRK03775.1    CH954181    EDV48975.1    KK853050    KDR12066.1    JRES01001565    KNC22050.1    NEVH01013255    PNF29238.1    ATLV01020573    ATLV01020574    ATLV01020575    KE525303    KFB45413.1    KQ971354    KYB26237.1    KYB26238.1    GEZM01086085    JAV59787.1    UFQT01000610    SSX25708.1    UFQT01000824    SSX27410.1    APCN01002684    CVRI01000063    CRL04219.1    KK107099    EZA59681.1    CH479185    EDW38330.1    QOIP01000005    RLU23151.1    AXCM01004698    SSX25707.1    KQ977459    KYN02566.1    KQ980713    KYN14385.1    AF510719    AAAB01008978    AAP47148.1    EAA13613.3    ADMH02002112    ETN58837.1    KQ976432    KYM87530.1    KQ981905    KYN33459.1    KQ414615    KOC68680.1    KQ435711    KOX79613.1    KQ982649    KYQ52979.1    GL888716    EGI58329.1    GAKP01004227    JAC54725.1    ADTU01007645    CCAG010007785    NNAY01000520    OXU27883.1    AJWK01013033    AXCN02000286    GL452320    EFN77499.1    KQ762882    OAD55372.1    KQ434796    KZC05832.1    KZ288248    PBC31140.1    DS235784    EEB16962.1    DQ011227    AAY63896.1    KK854411    PTY15622.1    DS232366    EDS40708.1    ACPB03002174    APGK01037738    KB740949    ENN77146.1    LBMM01005645    KMQ91337.1    CVRI01000002    CRK86663.1    GL442829    EFN62896.1    LJIJ01000187    ODN00770.1    PYGN01000498    PSN45323.1    JH818095    EKC37511.1    LNIX01000003    OXA58363.1    HACA01022445    CDW39806.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000009192    UP000007798    + More
UP000092553    UP000095300    UP000000803    UP000008792    UP000001292    UP000001070    UP000001819    UP000192221    UP000092445    UP000092443    UP000268350    UP000092460    UP000078200    UP000007801    UP000002282    UP000008711    UP000027135    UP000037069    UP000235965    UP000030765    UP000075880    UP000007266    UP000075885    UP000069272    UP000075840    UP000183832    UP000053097    UP000008744    UP000075884    UP000076408    UP000075920    UP000279307    UP000075883    UP000078542    UP000078492    UP000075882    UP000007062    UP000000673    UP000076407    UP000075903    UP000078540    UP000078541    UP000053825    UP000053105    UP000075809    UP000007755    UP000005205    UP000092444    UP000215335    UP000092461    UP000075886    UP000008237    UP000002358    UP000076502    UP000005203    UP000242457    UP000009046    UP000002320    UP000075900    UP000015103    UP000019118    UP000036403    UP000000311    UP000094527    UP000245037    UP000005408    UP000198287    UP000085678   

PRIDE

H9JJM3    Q9VFA9   

Pfam

PF00909   Ammonium_transp        + More
PF00520   Ion_trans
PF00999   Na_H_Exchanger
PF00027   cNMP_binding
PF00096   zf-C2H2
PF02991   Atg8

Interpro

IPR029020   Ammonium/urea_transptr        + More
IPR024041   NH4_transpt_AmtB-like_dom       
IPR001905   Ammonium_transpt       
IPR005821   Ion_trans_dom       
IPR006153   Cation/H_exchanger       
IPR014710   RmlC-like_jellyroll       
IPR018422   Cation/H_exchanger_CPA1       
IPR027359   Volt_channel_dom_sf       
IPR000595   cNMP-bd_dom       
IPR018490   cNMP-bd-like       
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR004241   Atg8-like       
IPR029071   Ubiquitin-like_domsf       

SUPFAM

SSF51206   SSF51206        + More
SSF57667   SSF57667       
SSF54236   SSF54236       

Gene 3D

1.10.3430.10     1.20.120.350     2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

H9JJM3   A0A194R0V9   A0A194PSR8   A0A2A4IXX3   A0A2H1VMS8   B4K5V9   + More
B4N8M1   A0A0M3QYI4   A0A1S4FGF9   A0A1I8P675   Q9VFA9   B4LZZ8   B4HDZ9   B4JGC0   Q294C0   A0A1W4VMK1   A0A1A9ZY94   A0A1A9XWD0   A0A3B0KCL2   A0A034WGQ2   W8BZ14   A0A1B0BL43   A0A3B0KJK5   A0A1A9VAX2   B3MX93   B4PS70   A0A0R1E419   B3P0S7   A0A067QRF1   A0A0L0BPN5   A0A2J7QL05   A0A084W5B9   A0A182ITC2   A0A139WEF3   A0A182PF20   A0A182F835   A0A139WE35   A0A1Y1KLR8   A0A336MI61   A0A336MBT3   A0A182I898   A0A1J1IVC6   A0A026WVJ4   B4GLA6   A0A182N6G1   A0A182YIF0   A0A182VXN3   A0A3L8DRX4   A0A182LY04   A0A336MBF4   A0A151IIR9   A0A195DNA5   A0A182KMQ3   Q7Z1M1   W5J3B1   A0A182XH54   A0A182VKT6   A0A195BNC5   A0A195F008   A0A0L7RD10   A0A0M9AB20   A0A151WYM6   F4X5H3   A0A034WKT0   A0A158P2Y4   A0A1B0FPG8   A0A232FBP7   A0A1B0CI43   A0A182QEB7   E2C3G1   A0A310SJ10   K7J3D0   A0A154P1X9   A0A088AMG9   A0A2A3EHF4   E0VUA6   Q1L729   A0A2R7W7D1   B0X562   A0A1I8JUR3   T1IDW3   N6U917   A0A0J7KM20   A0A1J1HFB9   E2AUK2   A0A1D2N676   A0A2P8YM68   K1RSL2   A0A226EKZ0   A0A0K2UPY8   A0A1S3IHP3  

PDB

5FUF     E-value=6.67444e-40,     Score=414

KEGG

101743522    K03320 ammonium transporter, Amt family | (RefSeq) putative ammonium transporter 2

GO

GO:0016021   GO:0008519   GO:1903718   GO:0050911   GO:0005216   GO:0015299   GO:0003676   GO:0008270   GO:0005634   GO:0005887   GO:0072488   GO:0015696   GO:0016020   GO:0042600   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887  

PANTHER

PTHR10110  

Subcellular location

Membrane  

Length:

613

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

231.03274

Exp number, first 60 AAs:

19.39782

Total prob of N-in:

0.07913

POSSIBLE N-term signal

sequence

outside

1  -  34

TMhelix

35  -  57

inside

58  -  77

TMhelix

78  -  100

outside

101  -  114

TMhelix

115  -  137

inside

138  -  148

TMhelix

149  -  168

outside

169  -  182

TMhelix

183  -  205

inside

206  -  217

TMhelix

218  -  240

outside

241  -  254

TMhelix

255  -  277

inside

278  -  289

TMhelix

290  -  312

outside

313  -  315

TMhelix

316  -  333

inside

334  -  339

TMhelix

340  -  362

outside

363  -  387

TMhelix

388  -  410

inside

411  -  613

 

 

Pi

26.133447

Theta

174.927866

Tajima's D

2.373298

CLR

0.158273

CSRT

0.928553572321384

Interpretation

Uncertain