Silkworm Genome Informatics Database

Gene

KWMTBOMO00774

Pre Gene Modal

BGIBMGA009710

Annotation

PREDICTED:_homeobox_even-skipped_homolog_protein_1_[Bombyx_mori]

Location

Bomo_Chr2(-):2757684-2778185 View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear Reliability : 2.99

CDS

ATGTAATCCTTGAGTCCGCAGTCAGAACAGATCGCGAACACAACGTCCGCCCCAGACCCGAATATACGAAGATACCGGACGGCGTTCACGAGGGAACAGCTCGCGAGGCTGGAGAAGGAGTTCATGAAAGAGAACTACGTCTCCCGACCGAGGAGGTGCGAGCTTGCTGCCCAGCTTCAGCTACCAGAGTCAACCATCAAGGTATGGTTCCAAAATCGAAGAATGAAAGACAAAAGACAGCGTATCGCAGTGGCGTGGCCTTACGCGGCGGTCTACAGCGATCCTGCGTTCGCGGCCTCAATCCTCCAAGCGGCGGCGTCGTCCGTCGGCCTCCCCTACGGCTATCCCAATCCAGCACTAATCCCGCCGTTCCACAACCCGCAGCTTCTACCCGCGGGATATCCCTACCCCTATCCCCCCTACCCCCGGTATCCGTACATCCCGAACCAGTCGTCCCCCGTCAACGAGCCCACAATAAGGCCTACCTATCCCAATTTCAATTTGAATGTCGACAAATAA

Protein

MXSLSPQSEQIANTTSAPDPNIRRYRTAFTREQLARLEKEFMKENYVSRPRRCELAAQLQLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAASSVGLPYGYPNPALIPPFHNPQLLPAGYPYPYPPYPRYPYIPNQSSPVNEPTIRPTYPNFNLNVDK

Uniprot

A0A2H1VMU9 O18325 A0A194R4U5 A0A194PT36 A0A212EK42 B0X1Y4 + More
A0A182G756 A0A1S4FGJ3 Q172I8 A0A1J1ICZ1 A4ZHY2

Pubmed

9352206 26354079 22118469 26483478 17510324

EMBL

ODYU01003411 SOQ42143.1 D38486 BAA22891.1 KQ460890 KPJ10886.1 + More
KQ459593 KPI96477.1 AGBW02014329 OWR41857.1 DS232274 EDS38914.1 JXUM01007295 KQ560237 KXJ83667.1 CH477436 EAT40938.1 CVRI01000044 CRK96830.1 DQ912974 ABP87397.1

Proteomes

UP000053240 UP000053268 UP000007151 UP000002320 UP000069940 UP000249989 + More
UP000008820 UP000183832

PRIDE

O18325

Pfam

PF00046 Homeodomain

Interpro

IPR009057   Homeobox-like_sf        + More
IPR020479   Homeobox_metazoa
IPR017970   Homeobox_CS
IPR001356   Homeobox_dom

SUPFAM

SSF46689 SSF46689

CDD

cd00086 homeodomain

ProteinModelPortal

A0A2H1VMU9 O18325 A0A194R4U5 A0A194PT36 A0A212EK42 B0X1Y4 + More
A0A182G756 A0A1S4FGJ3 Q172I8 A0A1J1ICZ1 A4ZHY2

PDB

1JGG E-value=1.66706e-23, Score=266

KEGG

101743380 K09320 homeobox even-skipped homolog protein | (RefSeq) homeobox even-skipped homolog protein 1

GO

GO:0005634 GO:0006355 GO:0043565 GO:0016021 GO:0003677 GO:0042600 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887

Subcellular location

Nucleus

Length:

172

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.2422

Exp number, first 60 AAs:

6e-05

Total prob of N-in:

0.43966

outside

1 - 172

Pi

184.505225

Theta

15.837157

Tajima's D

1.508214

CLR

0.927225

CSRT

0.797610119494025

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics