Gene

KWMTBOMO00770

Annotation

chorion_early_B_[Bombyx_mori]

Location

Bomo_Chr2(-):2617940-2618885      View in EpiBrowser

Full name

Chorion class CB protein M5H4       + More
Chorion class CB protein PC404      
Chorion class B protein ERB4      
Chorion protein ERB.1      
Chorion class B protein Ld10      
Chorion class B protein Ld34      

Alternative Name

Chorion class B protein 6A2

Location in the cell

Extracellular   Reliability : 3.054

CDS

ATGGCCGCCATATTAGTTTTATTCTGCGCATCAGCTGTCATGTTCCAAGTTTGCAACGCCCAATGTTACGGTCGGGATCCTCTGATCGGAGGATTGGCTGGGCCGTATGGCTCTGCTTGGGGCCCTTATGATGGCATTGGTCCGTATGACGGTCTGGGCTATGGCTCGCAATTAGGAGGAGGATTCATCGGCCTAAGCCCAGGAAATTTAGCAGCATCGTGCGGCGGCGGTCTCGCTGTTTCCAGCTCTTCTCCCATCACCCCTACTGGGCTCACATTAACTTCTGACAATACAATCGAAGGCACCGTTGCTGTGATGGGACAGCTGCCATTCCTGGGTGCGGTGGCTACCGATGGGGCGTTCGCTACTGCCGGCACTGGTGTTGTGATTTACGGGTGCGGTGATGGCGCCATCGGCATAGTTTCCGAAGCTCCTATTGCCGCGCCACTGCCGCCCAACGTCGGACCCGGTTACGGTCCGGGACCAATCGGATATGGACCCGCTAGAGGCGGATATAAAGGATGCGGGTGCAACAGTGTTATCTATTAA

Protein

MAAILVLFCASAVMFQVCNAQCYGRDPLIGGLAGPYGSAWGPYDGIGPYDGLGYGSQLGGGFIGLSPGNLAASCGGGLAVSSSSPITPTGLTLTSDNTIEGTVAVMGQLPFLGAVATDGAFATAGTGVVIYGCGDGAIGIVSEAPIAAPLPPNVGPGYGPGPIGYGPARGGYKGCGCNSVIY

Description

This protein is one of many from the eggshell of the silk moth.

Similarity

Belongs to the chorion protein family.

Keywords

Complete proteome   Reference proteome   Repeat   Signal  

Feature

chain  Chorion class CB protein M5H4

Uniprot

A0A0K2S3R0   H9JJM1   P08830   H9JJL8   A0A0K2S2X8   H9JJL4   + More
A0A0K2S351   A0A0K2S2Y2   P08930   H9J161   A0A194PST0   A0A194PU35   A0A194PU45   A0A0K2S2Q6   A0A194R0Y9   A0A194QZL6   A0A194PT61   A0A2W1BH48   A0A2W1BMP6   A0A194PUT0   A0A194R4X0   A0A194PZC5   A0A194PSU1   A0A194R046   A0A0N1III1   A0A194QZP5   A0A194PSV0   A0A194R063   A0A194PU40   Q17216   A0A0N0P9J7   S4NYM7   A0A0K2S306   Q17217   A0A194QZF4   A0A0K2S3P5   Q17215   S4PRR9   A0A0K2S2Z1   A0A2W1BEU0   P13532   P43515   Q17218   A0A2W1BD33   P60607   A0A2W1BGE3  

Pubmed

19121390    3338621    3462711    6573656    26354079    28756777    + More
1874417    23622113    6572954    7932786   

EMBL

AB999997    BAS21485.1    BABH01017347    BAS21478.1    M19075    M13835    + More
BABH01017345    BAS21469.1    BABH01017349    BAS21482.1    BAS21463.1    BAS21466.1    J01160    BABH01031331    BABH01031332    BAS21369.1    KQ459593    KPI96486.1    KPI96488.1    KPI96498.1    BAS21367.1    KQ460890    KPJ10915.1    KPJ10897.1    KPI96500.1    KPI96502.1    KZ150065    PZC74148.1    PZC74146.1    KPI96504.1    KPJ10911.1    KPI96505.1    KPI96496.1    KPJ10904.1    KQ460239    KPJ16407.1    KPJ10927.1    KPI96506.1    KPJ10919.1    KPI96493.1    X58450    CAA41356.1    KQ459364    KPJ01259.1    GAIX01010136    JAA82424.1    BAS21472.1    X58451    J01023    CAA41357.1    KPJ10923.1    BAS21470.1    X58449    BAS21475.1    CAA41355.1    GAIX01014488    JAA78072.1    BAS21476.1    KZ150197    PZC72305.1    M19077    U04662    X58452    CAA41358.1    PZC72311.1    U04668    PZC74142.1   

Proteomes

UP000005204    UP000053268    UP000053240   

PRIDE

P08830    H9JJL8    H9JJL4    H9J161    Q17216    Q17217    + More
P13532    Q17218   

Pfam

PF01723   Chorion_1

Interpro

IPR002635   Chorion       

ProteinModelPortal

A0A0K2S3R0   H9JJM1   P08830   H9JJL8   A0A0K2S2X8   H9JJL4   + More
A0A0K2S351   A0A0K2S2Y2   P08930   H9J161   A0A194PST0   A0A194PU35   A0A194PU45   A0A0K2S2Q6   A0A194R0Y9   A0A194QZL6   A0A194PT61   A0A2W1BH48   A0A2W1BMP6   A0A194PUT0   A0A194R4X0   A0A194PZC5   A0A194PSU1   A0A194R046   A0A0N1III1   A0A194QZP5   A0A194PSV0   A0A194R063   A0A194PU40   Q17216   A0A0N0P9J7   S4NYM7   A0A0K2S306   Q17217   A0A194QZF4   A0A0K2S3P5   Q17215   S4PRR9   A0A0K2S2Z1   A0A2W1BEU0   P13532   P43515   Q17218   A0A2W1BD33   P60607   A0A2W1BGE3  

KEGG

101742521    no KO assigned | (RefSeq) chorion class CB protein M5H4-like

GO

GO:0005213   GO:0042600   GO:0007275   GO:0007304   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887   GO:0016021  

SignalP

Position:   1 - 20,         Likelihood:  0.997645

 

 

Length:

182

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.41124

Exp number, first 60 AAs:

1.07515

Total prob of N-in:

0.08224

outside

1  -  182

 

 

Pi

159.71524

Theta

112.239917

Tajima's D

1.324379

CLR

0.359031

CSRT

0.748262586870656

Interpretation

Uncertain