SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00767
Pre Gene Modal
BGIBMGA009715
Annotation
chorion_early_B_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.243
 

Sequence

CDS
ATGGCCGCCAAGACCGCTATCTTTGTCAGCGTCTCCGCATTATTGTGGGTGAGTGCTGCAAGTCAATACCTGGGTCGCGATCCACTGATCGGTGGTCTAGGAGCTCCATGTGGTCCCTGGGGACCGTACGATGGCATCGGATACGACGGTCTGGGATACGGAGGTCTGGGAGTTGGGGGATTCATTGGTCTCGCTCCCGGTAACCTGGCAGCATCGTGTGGAGGCGGCTTCACTGTCACCAGCACTTCGCCCATTGCTCCTACCGGCATTACTGTGACGTCAGAGAACGCCATCGAAGGATCTTTGGCTGTGATTGGACAGCTTCCGTTCCTGGGCACTGTGGTCACGGAAGGCACCTTCCCGTCTAATGGTAGAGGTCTGGTGTCTTACGGCTGTGGTGATGGTGCTATCGGTATTGTCTCCGAGACGCCGGTGGCAGCTCCAGGGGCGCCCGTCGGTCCGGGACTAGGTTATGGTCCAGGGATCCCCCCGGTCGGCTTCGGATATAAGGGCATCGGTCCGGGATGTGGATGTGGCGGGTTGTTCTAA
Protein
MAAKTAIFVSVSALLWVSAASQYLGRDPLIGGLGAPCGPWGPYDGIGYDGLGYGGLGVGGFIGLAPGNLAASCGGGFTVTSTSPIAPTGITVTSENAIEGSLAVIGQLPFLGTVVTEGTFPSNGRGLVSYGCGDGAIGIVSETPVAAPGAPVGPGLGYGPGIPPVGFGYKGIGPGCGCGGLF

Summary

Similarity
Belongs to the chorion protein family.
Uniprot
Pfam
PF01723   Chorion_1
Interpro
IPR002635   Chorion       
ProteinModelPortal

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.978624
 
 
Length:
182
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
33.9884
Exp number, first 60 AAs:
24.57188
Total prob of N-in:
0.89079
POSSIBLE N-term signal
sequence
outside
1  -  182
 
 

Population Genetic Test Statistics

Pi
165.659155
Theta
159.792973
Tajima's D
0.078883
CLR
0.285936
CSRT
0.387630618469077
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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