Silkworm Genome Informatics Database

Gene

KWMTBOMO00766

Annotation

chorion_protein_gene_ErB.5_precursor_[Bombyx_mori]

Location

Bomo_Chr2(+):2580326-2581006 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.649

CDS

ATGCGTGTACCCGGTTTTGGTTCGATACGCGGTGATTGGGCAAATGGTATCGGATACGGGGGCTGGAAAAGCAGAGCTGGGTGTGCTGGTCGATCTCCAGATATCGCTGCAGCGGGTGCTCTGGGAGCCTCTAATGGAGGCAGCCTGGCTGTTGTCAGCTCATCATCTACAGCACCCACTGGGCTTTCCGTGACATCCGAGAATTACTACGAGGGTAATGTGGCCATCAATGGAAATCTACCGTTTCTGGGCACCGCTGATGTAGAAGGCACTTTCTCTAGCTCTGGTTTTGGTGGCATTAACTACAGTTGCGGTGATGGTGCTGTTGGCATTACTGACGAGAGCCCCGTTGGGCCGATAGCCCCGACTGCAACTGCGCCTATCGCTACTACCAAACCAGGCTTTGGTTACCGTGGTTTCTCAGGCTATGCCGGTACTGGATGCGGATGCGGAGGAGCCTTGTACTAA

Protein

MRVPGFGSIRGDWANGIGYGGWKSRAGCAGRSPDIAAAGALGASNGGSLAVVSSSSTAPTGLSVTSENYYEGNVAINGNLPFLGTADVEGTFSSSGFGGINYSCGDGAVGITDESPVGPIAPTATAPIATTKPGFGYRGFSGYAGTGCGCGGALY

Similarity

Belongs to the chorion protein family.

Uniprot

A0A0K2S3Q5 Q17215 Q17218 A0A0K2S2Z4

Pubmed

1874417

EMBL

AB999997 BAS21480.1 X58449 BAS21475.1 CAA41355.1 X58452 + More
CAA41358.1 BAS21484.1

PRIDE

Q17218

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

A0A0K2S3Q5 Q17215 Q17218 A0A0K2S2Z4

KEGG

101740806 no KO assigned | (RefSeq) BmCho-113; chorion class B protein ERB4-like

GO

GO:0005213 GO:0042600 GO:0007275 GO:0007304 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887 GO:0016021

Length:

155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05163

Exp number, first 60 AAs:

0.01355

Total prob of N-in:

0.07034

outside

1 - 155

Pi

263.79189

Theta

180.123598

Tajima's D

1.535661

CLR

109.201849

CSRT

0.796010199490025

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree