SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00765
Pre Gene Modal
BGIBMGA009716
Annotation
chorion_early_B_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.786
 

Sequence

CDS
ATGTCTGTCAAATTTTGCGTTCTTCTCGTGGCCGGACTTCTAACATCCGCTCTCAGTCAATGCTCGGGTCGTGGCTGGTACGAGGGCCTGGGCGGCGAAGGACCGGGTTTCAGCTCCTGGTACAACCGTTACGGTAACCGTGTCTTAGTAGACCTTGCAACGAATTCAGCTCTGGGAGCGTCTAATGGAGGAAGTTTCGCAGTGACCAGCGTGAGCCCATGTGCTCCTACCGGCATTGCCTTGTCATCCCAAAACATTTACGAAGGTCCTGTTGGTGTGGCCGGCAATCTACCTTTCCTTGGAACTGCTGCCGTCGAAGAAACCTTCAAGTCCATTGGTGTTGGCCATATATCGTCTCAATGTGGGGACGGGGTCGTGGCTATAAGAGCTGAAAGTCCCGTCTCTGCTATTACACCAAGCCCTGTGCCTGCAGTCCGGGGAGTGGTCAATGGGCTACTAGGCCAAGGTACGGAATGTGGCTGTGCTTCTTACTAG
Protein
MSVKFCVLLVAGLLTSALSQCSGRGWYEGLGGEGPGFSSWYNRYGNRVLVDLATNSALGASNGGSFAVTSVSPCAPTGIALSSQNIYEGPVGVAGNLPFLGTAAVEETFKSIGVGHISSQCGDGVVAIRAESPVSAITPSPVPAVRGVVNGLLGQGTECGCASY

Summary

Similarity
Belongs to the chorion protein family.
Pfam
PF01723   Chorion_1
Interpro
IPR002635   Chorion       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.997166
 
 
Length:
164
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.77814000000001
Exp number, first 60 AAs:
2.74478
Total prob of N-in:
0.16143
outside
1  -  164
 
 

Population Genetic Test Statistics

Pi
211.906531
Theta
193.939539
Tajima's D
0.406317
CLR
0.945736
CSRT
0.487275636218189
Interpretation
Uncertain
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