Silkworm Genome Informatics Database

Gene

KWMTBOMO00762

Annotation

chorion_class_CA_protein_ERA.1_precursor_[Bombyx_mori]

Location

Bomo_Chr2(-):2549760-2551095 View in EpiBrowser

Full name

Chorion class CA protein ERA.2       + More
Chorion class CA protein ERA.1
Chorion class CA protein ERA.3
Chorion class CA protein ERA.5
Chorion class CA protein ERA.4
Chorion class A protein Ld2/Ld41
Chorion class A protein Ld12
Chorion class A protein Ld5

Alternative Name

M6C11

Location in the cell

Extracellular Reliability : 2.596

CDS

ATGTCTAAACTTGTTGTCTTCTTATTCTGCATTCAAGTTTGTTTTATACAAAATGTGTACAGTCAGTGCTTGGGTCGTGTGGGTCCCGGTGGACCTCCTTTAGGACCATATGGGGGACCTCTCGGTGGGCCTGGATATGGTCCTGTCGGGTACGGCGGCTGTGGAGGGTACGGCGGCTCCGGCATCGGTAACGTGGCCGTGGCTGGCGAACTCCCCGTGGCAGGCTCCACCGGTGTAACGGGACAGGTGCCCGTCATCGGCGCGGTCGAGTTCGCGGGTCCTGCCTGCGCTGTCGGTTCTGTCTCCATCTCTGGCGCATGCGGACCCACCTGCGGATGCGGCGGTTCTCCATTCTATTAG

Protein

MSKLVVFLFCIQVCFIQNVYSQCLGRVGPGGPPLGPYGGPLGGPGYGPVGYGGCGGYGGSGIGNVAVAGELPVAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGGSPFY

Similarity

Belongs to the chorion protein family.

Keywords

Complete proteome Reference proteome Repeat Signal

Feature

chain Chorion class CA protein ERA.2

Uniprot

A0A0K2S2Y3 Q17212 A0A0K2S310 P13531 A0A0K2S359 Q17213 + More
Q17214 A0A0K2S368 A0A0K2S2Y7 P08829 A0A0K2S303 A0A0K2S2P8 A0A0K2S2Z6 P0C0U3 P0C0U2 P43516 P43514 A0A0K2S2X3 A0A0K2S2Z5 A0A0K2S2W2

Pubmed

1874417 3338621 3462711 7932786

EMBL

AB999997 BAS21474.1 X58445 BAS21477.1 M19076 BAS21473.1 + More
X58446 X58448 BAS21483.1 BAS21471.1 X58447 M13834 BAS21494.1 BAS21371.1 BAS21462.1 U04670 U04658 U04663 U04660 BAS21464.1 BAS21481.1 BAS21368.1

Proteomes

UP000005204

PRIDE

Q17212 P13531 P08829

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

A0A0K2S2Y3 Q17212 A0A0K2S310 P13531 A0A0K2S359 Q17213 + More
Q17214 A0A0K2S368 A0A0K2S2Y7 P08829 A0A0K2S303 A0A0K2S2P8 A0A0K2S2Z6 P0C0U3 P0C0U2 P43516 P43514 A0A0K2S2X3 A0A0K2S2Z5 A0A0K2S2W2

KEGG

100141508 no KO assigned | (RefSeq) Era.2, BmCho-107; chorion protein gene ErA.2

GO

GO:0042600 GO:0007275 GO:0005213 GO:0007304 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887 GO:0016021

SignalP

Position: 1 - 21, Likelihood: 0.999015

Length:

119

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.23139

Exp number, first 60 AAs:

1.01357

Total prob of N-in:

0.07468

outside

1 - 119

Pi

147.44713

Theta

156.026397

Tajima's D

-0.309745

CLR

245.347479

CSRT

0.285285735713214

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree