Silkworm Genome Informatics Database

Gene

KWMTBOMO00760

Annotation

chorion_early_A_[Bombyx_mori]

Location

Bomo_Chr2(+):2540016-2540592 View in EpiBrowser

Full name

Chorion class CA protein ERA.4       + More
Chorion class CA protein ERA.1
Chorion class CA protein ERA.3
Chorion class CA protein ERA.2

Alternative Name

M6C11

Location in the cell

Extracellular Reliability : 1.791 Nuclear Reliability : 1.317

CDS

ATGAATGTGTACAGCCAGTGCCTGGGTCGTGTGGGTCCCGGTGGACCTCCTTTAGGTCCATATGGCGGACCCCTCGGTGGACCTGGGTACGGCCCTGTCGGGTACGGCGGCTGTGGAGGGTACGGCGGCTCCGGCATCGGTAACGTGGCCGTGGCTGGCGAGCTCCCCGTGGCCGGCTCCGCCGCTGTATTGGGACAGGTGCCCGTCATCGGCGCGGTTGAGTTCGCGGGTCCTGCCTGCGCTGTCGGTTCTGTCTCCATCTCTGGCGCATGTGGACCCACCTGCGGATGCGGCGGCTCTCCATACTATTAG

Protein

MNVYSQCLGRVGPGGPPLGPYGGPLGGPGYGPVGYGGCGGYGGSGIGNVAVAGELPVAGSAAVLGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGGSPYY

Similarity

Belongs to the chorion protein family.

Keywords

Complete proteome Reference proteome Repeat Signal

Feature

chain Chorion class CA protein ERA.4

Uniprot

A0A0K2S2Y7 P08829 A0A0K2S310 P13531 A0A0K2S359 Q17213 + More
A0A0K2S2Y3 Q17212

Pubmed

1874417 3462711 3338621

EMBL

AB999997 BAS21471.1 X58447 M13834 BAS21477.1 M19076 + More
BAS21473.1 X58446 BAS21474.1 X58445

Proteomes

UP000005204

PRIDE

P08829 P13531 Q17212

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

A0A0K2S2Y7 P08829 A0A0K2S310 P13531 A0A0K2S359 Q17213 + More
A0A0K2S2Y3 Q17212

KEGG

693017 no KO assigned | (RefSeq) Era.4; chorion protein gene ErA.4

GO

GO:0005213 GO:0007304 GO:0007275 GO:0042600 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887 GO:0016021

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.93946

Exp number, first 60 AAs:

0.55114

Total prob of N-in:

0.36411

outside

1 - 103

Pi

314.328887

Theta

216.726971

Tajima's D

1.308154

CLR

0

CSRT

0.737913104344783

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree