Gene

KWMTBOMO00759

Pre Gene Modal

BGIBMGA009719

Annotation

chorion_early_B_[Bombyx_mori]

Location

Bomo_Chr2(-):2532107-2533135      View in EpiBrowser

Full name

Chorion class CB protein M5H4       + More
Chorion class B protein PC401      
Chorion protein ERB.1      
Chorion class B protein Ld10      
Chorion class B protein Ld34      
Chorion class B protein ERB4      

Alternative Name

Chorion class B protein 6A2

Location in the cell

Extracellular   Reliability : 2.398

CDS

ATGGCCTTACGAACTGCACTTTTTTGCTTTTCTGCGCTCTTAGTACAAAAAGTACACAGTCAGTGCTTAGGTCGTGGAGCAGCCGGGCCGTATCCCCCTTACGGCCCCGGCTGGGGGGCTTATGATGCCGTAGGATACGACGGGTACGCTCCGGGAGGATTCATAGGACTTGCCCCCGGAAACCTGGCGGCGTCCTGTGGCGGAGGTCTCGCTGTAACCAGTACATCACCAATAACTCCCACCGGTCTCACGGTGAATTCGGAAAACTCCATCGAAGGCACCGTCACGATAGTCGGTCAGCTACCGTTCTTGGGTGCCGTTGCTACTGATGGAGTATTCTCGTCTGCTGGCGGCGGGACGGTCGTGTACGGATGCGGTGATGGTGCGATCGGCATTACCAACGAAATGCCTATATCGGCGCCTACTGTGGGTCCAGGCTATGGCCCAGTCGGCAGACCTTACCCTGGTTTCAAAGGAATAGGGCCTTGTTAA

Protein

MALRTALFCFSALLVQKVHSQCLGRGAAGPYPPYGPGWGAYDAVGYDGYAPGGFIGLAPGNLAASCGGGLAVTSTSPITPTGLTVNSENSIEGTVTIVGQLPFLGAVATDGVFSSAGGGTVVYGCGDGAIGITNEMPISAPTVGPGYGPVGRPYPGFKGIGPC

Description

This protein is one of many from the eggshell of the silk moth.

Similarity

Belongs to the chorion protein family.

Keywords

Complete proteome   Reference proteome   Repeat   Signal  

Feature

chain  Chorion class CB protein M5H4

Uniprot

H9JJL8   A0A0K2S2X8   A0A0K2S3R0   A0A0K2S351   P08830   H9JJM1   + More
A0A0K2S2Y2   A0A2W1BMP6   A0A2W1BKW2   A0A0K2S3Q5   P02847   Q17215   A0A212EY31   S4P3S6   A0A0K2S2Z1   P13532   A0A2W1BEU0   Q17218   A0A194R051   A0A2W1BGE3   A0A194R4X0   P43515   P60607   Q17217   A0A212F3P4   A0A0K2S3P5   A0A212EY37   A0A2W1BKG6  

Pubmed

19121390    3338621    3462711    28756777    519771    1874417    + More
22118469    23622113    26354079    7932786    6572954   

EMBL

BABH01017345    AB999997    BAS21469.1    BAS21485.1    BAS21463.1    M19075    + More
M13835    BABH01017347    BAS21478.1    BAS21466.1    KZ150065    PZC74146.1    KZ150197    PZC72313.1    BAS21480.1    V00077    X58449    BAS21475.1    CAA41355.1    AGBW02011627    OWR46409.1    GAIX01007956    JAA84604.1    BAS21476.1    M19077    PZC72305.1    X58452    CAA41358.1    KQ460890    KPJ10909.1    PZC74142.1    KPJ10911.1    U04662    U04668    X58451    J01023    CAA41357.1    AGBW02010522    OWR48351.1    BAS21470.1    AGBW02011628    OWR46408.1    PZC74144.1   

Proteomes

UP000005204    UP000007151    UP000053240   

PRIDE

H9JJL8    P08830    P13532    Q17218    Q17217   

Pfam

PF01723   Chorion_1

Interpro

IPR002635   Chorion       

ProteinModelPortal

H9JJL8   A0A0K2S2X8   A0A0K2S3R0   A0A0K2S351   P08830   H9JJM1   + More
A0A0K2S2Y2   A0A2W1BMP6   A0A2W1BKW2   A0A0K2S3Q5   P02847   Q17215   A0A212EY31   S4P3S6   A0A0K2S2Z1   P13532   A0A2W1BEU0   Q17218   A0A194R051   A0A2W1BGE3   A0A194R4X0   P43515   P60607   Q17217   A0A212F3P4   A0A0K2S3P5   A0A212EY37   A0A2W1BKG6  

KEGG

101740255    no KO assigned | (RefSeq) chorion class CB protein M5H4-like

GO

GO:0005213   GO:0007275   GO:0042600   GO:0007304   GO:0003899   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887   GO:0016021  

SignalP

Position:   1 - 20,         Likelihood:  0.995316

 

 

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.43326

Exp number, first 60 AAs:

0.14392

Total prob of N-in:

0.05492

outside

1  -  163

 

 

Pi

29.531266

Theta

27.10043

Tajima's D

0.27218

CLR

0.719241

CSRT

0.451627418629069

Interpretation

Uncertain