Gene

KWMTBOMO00756

Pre Gene Modal

BGIBMGA009721

Annotation

chorion_early_B_[Bombyx_mori]

Location

Bomo_Chr2(+):2515656-2517618      View in EpiBrowser

Full name

Chorion class CB protein PC404       + More
Chorion protein ERB.1      
Chorion class B protein Ld10      
Chorion class B protein Ld34      
Chorion class B protein Ld32      

Location in the cell

Extracellular   Reliability : 2.063 PlasmaMembrane   Reliability : 1.542

CDS

ATGGACGGGAAAGCTGTATTTGTCCTCAGCTTACAAGCTTTATTTGTACAGGTGGTAATGTGCATCGGCCCTTACAACCCAGTTTTCGACGACAGTTTTAACTGCTTCCCGTTTGGCGGCGTCCCACCTTTTGATACCGGTTTTGGCCCACTGGACGGTCCCTACCCTGGCTGTGGATTCGGGCCACTGGCTTCATCTATCATCGCTCCACCACCAGGCATAGCCGCAGGATACAACGGCCTACTGCCAATATCGGTTGCCCCACCCACACTCCCTCAAGCCAGCTTATCGGTTTTGTCAGAGAACGTAATCGAAGGTGTTGTGAAAGTTGTAGGACAGTTACCGTTTATTAGTTCGATAGCTATGTCTGGAGAGTTTCCTACCACCGGCACTGGAGAAGTGGCGTATGGGTGTGGCGATACAGCGGTGATCATCAATGAAGCACCAGGGATTGCGGCTGTCTTAGATTATGCGCCTATACCTTACAATTTCGACGATGTAGGCTATAGAACACCAGGATGCGGCTTTGGCCCGTACCATTAA

Protein

MDGKAVFVLSLQALFVQVVMCIGPYNPVFDDSFNCFPFGGVPPFDTGFGPLDGPYPGCGFGPLASSIIAPPPGIAAGYNGLLPISVAPPTLPQASLSVLSENVIEGVVKVVGQLPFISSIAMSGEFPTTGTGEVAYGCGDTAVIINEAPGIAAVLDYAPIPYNFDDVGYRTPGCGFGPYH

Similarity

Belongs to the chorion protein family.

Keywords

Repeat   Complete proteome   Reference proteome   Signal  

Feature

chain  Chorion class CB protein PC404

Uniprot

H9JJM0   A0A0K2S2Y2   P08930   H9JJM1   A0A194R051   A0A2W1BHQ4   + More
A0A194PUR5   A0A194PU35   A0A2A4JZQ6   A0A0K2S2S6   A0A212EY37   Q17183   A0A212FM18   A0A0K2S2U8   A0A2W1BKW2   Q17215   Q17184   A0A2W1BMP6   A0A2W1BH48   A0A2W1BD33   Q17182   P13532   A0A0K2S314   A0A212F2P1   A0A0N1IGV2   A0A194Q567   A0A2W1BKV3   A0A0N1III1   A0A2W1BBB2   A0A0N0PDX4   A0A194QZP5   A0A212F3N6   A0A212F3P4   A0A212EZB3   P43515   A0A194PT51   A0A2W1BGE3   A0A0K2S3Q5   P60607   A0A212F3M9   A0A2W1BKG6   P50604  

Pubmed

19121390    6573656    26354079    28756777    22118469    7608986    + More
1874417    1569584    3338621    7932786   

EMBL

BABH01017345    AB999997    BAS21465.1    BAS21466.1    J01160    BABH01017347    + More
BAS21478.1    KQ460890    KPJ10909.1    KZ150197    PZC72310.1    KQ459593    KPI96489.1    KPI96488.1    NWSH01000343    PCG77256.1    BAS21387.1    AGBW02011628    OWR46408.1    X77746    CAA54794.1    AGBW02007667    OWR54781.1    BAS21431.1    PZC72313.1    X58449    BAS21475.1    CAA41355.1    X66164    CAA46946.1    KZ150065    PZC74146.1    PZC74148.1    PZC72311.1    X77747    CAA54795.1    M19077    BAS21423.1    AGBW02010710    OWR47997.1    KQ460675    KPJ12922.1    KQ459460    KPJ00687.1    PZC72303.1    KQ460239    KPJ16407.1    PZC72308.1    KQ460009    KPJ18478.1    KPJ10927.1    AGBW02010522    OWR48349.1    OWR48351.1    AGBW02011312    OWR46838.1    U04662    KPI96492.1    PZC74142.1    BAS21480.1    U04668    OWR48348.1    PZC74144.1    U04667   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151   

PRIDE

Q17183    Q17184    Q17182    P13532   

Pfam

PF01723   Chorion_1

Interpro

IPR002635   Chorion        + More
IPR037931   BAP18       
IPR001005   SANT/Myb       
IPR011049   Serralysin-like_metalloprot_C       

Gene 3D

2.150.10.10    

CDD

cd00167  SANT

ProteinModelPortal

H9JJM0   A0A0K2S2Y2   P08930   H9JJM1   A0A194R051   A0A2W1BHQ4   + More
A0A194PUR5   A0A194PU35   A0A2A4JZQ6   A0A0K2S2S6   A0A212EY37   Q17183   A0A212FM18   A0A0K2S2U8   A0A2W1BKW2   Q17215   Q17184   A0A2W1BMP6   A0A2W1BH48   A0A2W1BD33   Q17182   P13532   A0A0K2S314   A0A212F2P1   A0A0N1IGV2   A0A194Q567   A0A2W1BKV3   A0A0N1III1   A0A2W1BBB2   A0A0N0PDX4   A0A194QZP5   A0A212F3N6   A0A212F3P4   A0A212EZB3   P43515   A0A194PT51   A0A2W1BGE3   A0A0K2S3Q5   P60607   A0A212F3M9   A0A2W1BKG6   P50604  

KEGG

101739706    no KO assigned | (RefSeq) BmCho-98; chorion class B protein PC10-like

GO

GO:0042600   GO:0007275   GO:0005213   GO:0007304   GO:0003899   GO:0071339   GO:0016589   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887   GO:0016021  

PANTHER

PTHR21397:SF2  

SignalP

Position:   1 - 21,         Likelihood:  0.974951

 

 

Length:

180

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.33688

Exp number, first 60 AAs:

18.47463

Total prob of N-in:

0.79931

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  180

 

 

Pi

319.678624

Theta

210.608163

Tajima's D

1.500035

CLR

0.000204

CSRT

0.784360781960902

Interpretation

Uncertain