SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00755
Pre Gene Modal
BGIBMGA009633
Annotation
Hdd1-like_protein?_partial_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 3.662
 

Sequence

CDS
ATGGAGTCTGGAGGGGTATTGGCCGTGATTTTAGTACTAATACAGGGTATCCTAAGTTTGCCGATGTCCGGGAACGGCTGCCTCGGGTCGAACTTGTACAGCCCTTACGGCTCATCCCTCTACATTCCCACAGTAGCGACCGGGAACGGCCAGGCCACGGTCACCTCCTTACCGAATTGCTTTAGCCCCGCAACGGGGTTTCCGGACTACGGCCCCGTCCGCACTAACCAAGTGACGCCCCTGGTCACCGAGATCGTGCCTTCTCTGCAGTTCGGTGACATTTCGGTCACAGGGGACATGCCGATAGGCGGCACGATAAAAGTGAGCGGTTGCTTCCCGGTTTACGGCACGGTCGCCGTCGATGGTAACATGCCGTCTTCTGGTAAGGCTGTCATAAATACTGGCGGCGGTTTCGTCACTCAATACATAGATCCTTCATGTGGATGTGGACGTCTATAG
Protein
MESGGVLAVILVLIQGILSLPMSGNGCLGSNLYSPYGSSLYIPTVATGNGQATVTSLPNCFSPATGFPDYGPVRTNQVTPLVTEIVPSLQFGDISVTGDMPIGGTIKVSGCFPVYGTVAVDGNMPSSGKAVINTGGGFVTQYIDPSCGCGRL

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.973187
 
 
Length:
152
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
15.42677
Exp number, first 60 AAs:
15.14868
Total prob of N-in:
0.43160
POSSIBLE N-term signal
sequence
outside
1  -  152
 
 

Population Genetic Test Statistics

Pi
348.293061
Theta
236.079312
Tajima's D
1.538703
CLR
0
CSRT
0.794910254487276
Interpretation
Uncertain
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