Gene

KWMTBOMO00754

Pre Gene Modal

BGIBMGA009629

Annotation

chorion_class_B_[Bombyx_mori]

Location

Bomo_Chr2(-):2484717-2486525      View in EpiBrowser

Full name

Chorion class B protein Ld34       + More
Chorion class B protein Ld10      
Chorion class CB protein M5H4      

Location in the cell

Extracellular   Reliability : 4.262

CDS

ATGTCTCTGAGGTGCGTCGTGTTTTGTATTTCCGCTTTCCTAATACAAACAATATCAAGCCAGTGCGTTGGCTACGGATCTATTTCACCATGCAACGGGAACTTCCCATCTTCTGTCAATCTACCACAACCTGGCATGACCATCTGCTCGGACAACCTGATCATCGAAGGTCCTGTCTGTATCCAGGGAAGAGTTCCATTTTCAGCCACCGTTGCTGTGGAAGGCCAGTTTCCCACCTCTGGCTACGGAAAGGTCACCTACGAATGCGGTAATGACTTCGGCCTCACCAACCTTCCTCTGGGGTATGGTGGACGCGGTGGTAATTGCGGCTGTGGTAGGCAATTTTATTAG

Protein

MSLRCVVFCISAFLIQTISSQCVGYGSISPCNGNFPSSVNLPQPGMTICSDNLIIEGPVCIQGRVPFSATVAVEGQFPTSGYGKVTYECGNDFGLTNLPLGYGGRGGNCGCGRQFY

Similarity

Belongs to the chorion protein family.

Keywords

Repeat   Signal   Complete proteome   Reference proteome  

Feature

chain  Chorion class B protein Ld34

Uniprot

A0A0K2S2W8   H9JJC8   A0A212FM27   H9JJL8   A0A0K2S2X8   A0A2A4JL74   + More
A0A194QZP5   A0A194R051   A0A194R0Y9   A0A194PUT0   A0A194R046   A0A194PU40   A0A0N0P9J7   A0A194PSU1   A0A194R4X0   A0A194PT61   A0A212EY31   A0A194R063   A0A194PSU6   A0A194R4W6   A0A0N1IGV2   A0A194PZC5   A0A194PSV0   A0A0N1III1   A0A194QZF4   A0A194PU45   A0A194QZC5   S4PUB6   A0A2W1BMP6   A0A2W1BH48   A0A0K2S3R0   P60607   A0A2W1BKW2   A0A194PT51   P43515   H9JJM1   P08830   A0A0K2S2Y2  

Pubmed

19121390    22118469    26354079    23622113    28756777    7932786    + More
3338621    3462711   

EMBL

AB999997    BAS21459.1    BABH01042126    AGBW02007661    OWR54786.1    BABH01017345    + More
BAS21469.1    NWSH01001195    PCG72160.1    KQ460890    KPJ10927.1    KPJ10909.1    KPJ10915.1    KQ459593    KPI96504.1    KPJ10904.1    KPI96493.1    KQ459364    KPJ01259.1    KPI96496.1    KPJ10911.1    KPI96500.1    KPI96502.1    AGBW02011627    OWR46409.1    KPJ10919.1    KPI96501.1    KPJ10906.1    KQ460675    KPJ12922.1    KPI96505.1    KPI96506.1    KQ460239    KPJ16407.1    KPJ10923.1    KPI96498.1    KPJ10893.1    GAIX01010573    JAA81987.1    KZ150065    PZC74146.1    PZC74148.1    BAS21485.1    U04668    KZ150197    PZC72313.1    KPI96492.1    U04662    BABH01017347    BAS21478.1    M19075    M13835    BAS21466.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268   

PRIDE

H9JJC8    H9JJL8    P08830   

Pfam

PF01723   Chorion_1

Interpro

IPR002635   Chorion       

ProteinModelPortal

A0A0K2S2W8   H9JJC8   A0A212FM27   H9JJL8   A0A0K2S2X8   A0A2A4JL74   + More
A0A194QZP5   A0A194R051   A0A194R0Y9   A0A194PUT0   A0A194R046   A0A194PU40   A0A0N0P9J7   A0A194PSU1   A0A194R4X0   A0A194PT61   A0A212EY31   A0A194R063   A0A194PSU6   A0A194R4W6   A0A0N1IGV2   A0A194PZC5   A0A194PSV0   A0A0N1III1   A0A194QZF4   A0A194PU45   A0A194QZC5   S4PUB6   A0A2W1BMP6   A0A2W1BH48   A0A0K2S3R0   P60607   A0A2W1BKW2   A0A194PT51   P43515   H9JJM1   P08830   A0A0K2S2Y2  

KEGG

101740523    no KO assigned | (RefSeq) chorion class B protein M2410-like

GO

GO:0007304   GO:0042600   GO:0007275   GO:0005213   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887   GO:0016021  

SignalP

Position:   1 - 20,         Likelihood:  0.994957

 

 

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.53205

Exp number, first 60 AAs:

3.52817

Total prob of N-in:

0.30793

outside

1  -  116

 

 

Pi

70.541895

Theta

128.022768

Tajima's D

-0.752258

CLR

0.552626

CSRT

0.190090495475226

Interpretation

Uncertain