Silkworm Genome Informatics Database

Gene

KWMTBOMO00744

Annotation

chorion_early_B_[Bombyx_mori]

Location

Bomo_Chr2(+):2205657-2206357 View in EpiBrowser

Full name

Chorion protein ERB.1

Location in the cell

Extracellular Reliability : 2.962

CDS

ATGACCTATAAGTTGATCTTCATTTCCTTCCTAGTATGCTCAACACAGGGACGCGGTCGTTTCGGCAGCTGTGGCTGCGGTGGCTGGGTCTACGGTAACCGTGGCTATAATGCTCTGGGAAATGACATCATCGCTGCTTCTGCTTTGGGAGCTTCCCACGGTGGAGGTCTCGCCGTCGTCACTACCTCTGCCGCTCCTACTGGTCTGGACGTGACTTCGGAAAACATGTACGAGGGTACTGTGGGTATTTGCGGTAGCCTACCTTTCCTCGGGGCTGCTGCTGTGGAAGGTTCTTTCCTCGCTGCTGGTGCTGGCGACATGAACTATGGCTGCGGCGACGGCGCCGTCGGCATCGTGGCCGAGAGAGGCAGTAGTTACGCTGGTGGTCTCAGCTACAACCCGGGCTACGTTTTCAACTATGGTGGACTTAGAGTGTGTGGCTGCAAATGCGGTGCTGCCTGGTTGAAACGCTGA

Protein

MTYKLIFISFLVCSTQGRGRFGSCGCGGWVYGNRGYNALGNDIIAASALGASHGGGLAVVTTSAAPTGLDVTSENMYEGTVGICGSLPFLGAAAVEGSFLAAGAGDMNYGCGDGAVGIVAERGSSYAGGLSYNPGYVFNYGGLRVCGCKCGAAWLKR

Similarity

Belongs to the chorion protein family.

Keywords

Complete proteome Reference proteome Repeat Signal

Feature

chain Chorion protein ERB.1

Uniprot

A0A0K2S323 Q17216 P13532 A0A0K2S2Z1

Pubmed

1874417 3338621

EMBL

AB999997 BAS21433.1 X58450 CAA41356.1 M19077 BAS21476.1 + More

Proteomes

UP000005204

PRIDE

Q17216 P13532

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

A0A0K2S323 Q17216 P13532 A0A0K2S2Z1

KEGG

101742977 no KO assigned | (RefSeq) chorion class B protein M2807-like

GO

GO:0005213 GO:0042600 GO:0007275 GO:0007304 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887 GO:0016021

SignalP

Position: 1 - 19, Likelihood: 0.949247

Length:

157

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.01654

Exp number, first 60 AAs:

1.66736

Total prob of N-in:

0.16994

outside

1 - 157

Pi

224.413921

Theta

184.966493

Tajima's D

0.671081

CLR

40.27777

CSRT

0.563921803909805

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree