Gene

KWMTBOMO00742

Annotation

PREDICTED:_uncharacterized_protein_LOC106136109_[Amyelois_transitella]

Location

Bomo_Chr2(+):1988717-1989131      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.72

CDS

ATGAGTGTGGAAAAAACAATTGCAAGTGGCAGTAGTGACCTTGGTCGTGTGGGTGTAAGGGTATCACCGTTCTACCCGGATGAACCTGCGCTCTGGTTTGCACAGCTGGAGAGCCAGTTCCTGTTGTCGAGTATCACCGCTGACTCGACAAAATTCCACTATACCTGCAGCCAGTTGGATGAAACCTACGCCTCGACAGTGGAGGGTATCATCCCCAATCCTCCAGCCAGTGGGAAGTACGAGCGACTAAAGTCAAAGTTGATTAACCGTGTTTCCAAGTCCCGTGAAAAGAAAGTCCAACAACTCCTGCATCACGAGGAACTCGTTGTGTCTCAAAAGTGA

Protein

MSVEKTIASGSSDLGRVGVRVSPFYPDEPALWFAQLESQFLLSSITADSTKFHYTCSQLDETYASTVEGIIPNPPASGKYERLKSKLINRVSKSREKKVQQLLHHEELVVSQK

Uniprot

A0A1E1W488   A0A2H1WD01   A0A2H1WXE7   A0A212EUF0   A0A2A4J8M7   A0A0J7K112   + More
E2BBH0   A0A0L7QMU1   A0A0J7K0A7   A0A085LTM6   A0A085N4U2   A0A151K0A8   A0A151J3D2   A0A0L7QK36   A0A151JUB8   A0A151IZ47   A0A085NBV3   A0A2A4K2H4   A0A0L7QS28   A0A1Y1MXV9   A0A151ITG2   A0A151XAM5   A0A0N5DV64   A0A0L7QKE6   A0A2J7RQK2   A0A0J7KD10   A0A0L7QPH0   A0A212FK08   A0A0J7K6V3   A0A0L7QJB5   A0A2J7QJD3   A0A151JBD3   A0A2J7QTC8   A0A0J7K7T5   A0A2J7QCU8   A0A1W4WYX3   A0A1E1WJH3   A0A2J7PCS9   A0A2J7RGP3   A0A151JCH0   A0A2J7QH56   A0A1I8Q298   A0A2J7PLR6   A0A0N5DV73   A0A2J7Q198   A0A2J7PML8   A0A3L8D4U3   A0A151IKS7   A0A151JBY5   A0A2J7PNS7   A0A2G8LNT2   X1X8P9   A0A154PMS5   X1WYV7   A0A0B1PFX3   A0A0J7K6I6   A0A0J7K6V1   W8B3F8   A0A1X7VSH1   W4ZL33   A0A151IIJ9   A0A2G8KJT2   A0A1W4WAG0   A0A085LYM7   X1XLE3   A0A154NZG0   A0A2G8JL30   A0A151INI0   A0A1W4WUW2   A0A1I8Q981   A0A085N3N9   A0A1W4WV29   W4Z1M4   A0A1W4XIW9   A0A2J7RQV8   A0A2J7QJA8   A0A0N8P258   A0A1W4X3X8   A0A2G8LNJ3   A0A1W4XBP5   A0A1I8NYN8   A0A0N8P0K1   W4ZGE8   A0A151IBN8   A0A151IZ67   A0A085NK57   A0A085N1S3   X1WIV3   A0A085MLI3   A0A2J7Q5S3   A0A2G8L6X1   A0A085NBV0   A0A1S4EQ14   A0A151K1Q2   A0A085N631   W4ZGH9   W4YMV4   A0A2J7RDQ5  

Pubmed

22118469    20798317    24929829    28004739    30249741    29023486    + More
24495485    17994087   

EMBL

GDQN01009305    JAT81749.1    ODYU01007829    SOQ50933.1    ODYU01011787    SOQ57731.1    + More
AGBW02012433    OWR45074.1    NWSH01002598    PCG67884.1    LBMM01018126    KMQ83871.1    GL447057    EFN86960.1    KQ414874    KOC59935.1    LBMM01018089    KMQ83878.1    KL363297    KFD48322.1    KL367555    KFD64488.1    KQ981301    KYN43041.1    KQ980296    KYN16851.1    KQ414987    KOC58988.1    KQ981751    KYN36157.1    KQ980726    KYN14011.1    KL367519    KFD66949.1    NWSH01000267    PCG77880.1    KQ414761    KOC61433.1    GEZM01017686    JAV90494.1    KQ981018    KYN10257.1    KQ982338    KYQ57407.1    KQ414945    KOC59093.1    NEVH01000707    PNF43124.1    LBMM01009142    KMQ88358.1    KQ414836    KOC60371.1    AGBW02008172    OWR54062.1    LBMM01012479    KMQ86203.1    LHQN01021927    LHQN01025379    KOC58628.1    KOC58659.1    NEVH01013558    PNF28672.1    KQ979162    KYN22390.1    NEVH01011195    PNF31836.1    LBMM01012075    KMQ86422.1    NEVH01015872    PNF26409.1    GDQN01010767    GDQN01010160    GDQN01006601    GDQN01005392    GDQN01003910    GDQN01003907    GDQN01003887    JAT80287.1    JAT80894.1    JAT84453.1    JAT85662.1    JAT87144.1    JAT87147.1    JAT87167.1    NEVH01026435    PNF14140.1    NEVH01003759    PNF40011.1    KQ979048    KYN23218.1    NEVH01014357    PNF27922.1    NEVH01024424    PNF17276.1    NEVH01019603    PNF22346.1    NEVH01023981    PNF17578.1    QOIP01000013    RLU15256.1    KQ977165    KYN05204.1    KQ979103    KYN22624.1    NEVH01023305    PNF17992.1    MRZV01000023    PIK61894.1    ABLF02062577    KQ434992    KZC13185.1    ABLF02062578    KN538436    KHJ40519.1    LBMM01013103    KMQ85816.1    LBMM01012923    LBMM01012917    KMQ85926.1    KMQ85930.1    GAMC01010905    JAB95650.1    AAGJ04013171    KQ977516    KYN02153.1    MRZV01000532    PIK48263.1    KL363259    KFD50073.1    ABLF02004414    ABLF02004416    KQ434784    KZC04993.1    MRZV01001674    PIK36447.1    KQ976962    KYN06788.1    KL367562    KFD64085.1    AAGJ04018350    NEVH01000615    PNF43219.1    PNF28675.1    CH905517    KPU81804.1    MRZV01000025    PIK61772.1    CH902647    KPU77348.1    AAGJ04029894    KQ978092    KYM97057.1    KQ980730    KYN13990.1    KL367492    KFD69853.1    KL367573    KFD63419.1    ABLF02032144    KL363185    KFD58079.1    NEVH01017547    PNF23930.1    MRZV01000197    PIK55880.1    KFD66946.1    LKEX01009256    KYN50060.1    KL367547    KFD64927.1    AAGJ04088930    AAGJ04032598    NEVH01005285    PNF38969.1   

Proteomes

UP000007151    UP000218220    UP000036403    UP000008237    UP000053825    UP000078541    + More
UP000078492    UP000075809    UP000046395    UP000235965    UP000192223    UP000095300    UP000279307    UP000078542    UP000230750    UP000007819    UP000076502    UP000007879    UP000007110    UP000007801    UP000079169   

Pfam

PF00665   rve        + More
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17921   Integrase_H2C2
PF00498   FHA
PF00077   RVP

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR001995   Peptidase_A2_cat       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR000253   FHA_dom       
IPR008984   SMAD_FHA_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR034132   RP_Saci-like       
IPR018061   Retropepsins       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF49879   SSF49879       

Gene 3D

2.40.70.10     3.30.420.10    

CDD

cd00060  FHA
cd06094  RP_Saci_like

ProteinModelPortal

A0A1E1W488   A0A2H1WD01   A0A2H1WXE7   A0A212EUF0   A0A2A4J8M7   A0A0J7K112   + More
E2BBH0   A0A0L7QMU1   A0A0J7K0A7   A0A085LTM6   A0A085N4U2   A0A151K0A8   A0A151J3D2   A0A0L7QK36   A0A151JUB8   A0A151IZ47   A0A085NBV3   A0A2A4K2H4   A0A0L7QS28   A0A1Y1MXV9   A0A151ITG2   A0A151XAM5   A0A0N5DV64   A0A0L7QKE6   A0A2J7RQK2   A0A0J7KD10   A0A0L7QPH0   A0A212FK08   A0A0J7K6V3   A0A0L7QJB5   A0A2J7QJD3   A0A151JBD3   A0A2J7QTC8   A0A0J7K7T5   A0A2J7QCU8   A0A1W4WYX3   A0A1E1WJH3   A0A2J7PCS9   A0A2J7RGP3   A0A151JCH0   A0A2J7QH56   A0A1I8Q298   A0A2J7PLR6   A0A0N5DV73   A0A2J7Q198   A0A2J7PML8   A0A3L8D4U3   A0A151IKS7   A0A151JBY5   A0A2J7PNS7   A0A2G8LNT2   X1X8P9   A0A154PMS5   X1WYV7   A0A0B1PFX3   A0A0J7K6I6   A0A0J7K6V1   W8B3F8   A0A1X7VSH1   W4ZL33   A0A151IIJ9   A0A2G8KJT2   A0A1W4WAG0   A0A085LYM7   X1XLE3   A0A154NZG0   A0A2G8JL30   A0A151INI0   A0A1W4WUW2   A0A1I8Q981   A0A085N3N9   A0A1W4WV29   W4Z1M4   A0A1W4XIW9   A0A2J7RQV8   A0A2J7QJA8   A0A0N8P258   A0A1W4X3X8   A0A2G8LNJ3   A0A1W4XBP5   A0A1I8NYN8   A0A0N8P0K1   W4ZGE8   A0A151IBN8   A0A151IZ67   A0A085NK57   A0A085N1S3   X1WIV3   A0A085MLI3   A0A2J7Q5S3   A0A2G8L6X1   A0A085NBV0   A0A1S4EQ14   A0A151K1Q2   A0A085N631   W4ZGH9   W4YMV4   A0A2J7RDQ5  

KEGG

NA   

GO

GO:0004190   GO:0015074   GO:0003676   GO:0005634  

Length:

113

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00247

Exp number, first 60 AAs:

0.00247

Total prob of N-in:

0.24458

outside

1  -  113

 

 

Pi

269.165603

Theta

105.952743

Tajima's D

4.831904

CLR

0

CSRT

0.999950002499875

Interpretation

Uncertain