Silkworm Genome Informatics Database

Gene

KWMTBOMO00740

Pre Gene Modal

BGIBMGA003248

Annotation

chorion_early_B_[Bombyx_mori]

Location

Bomo_Chr2(+):1901786-1902623 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.117

CDS

ATGAATTCAATACAAGTTTCATTTCAATCGAGATTTCGGAAGGCGAATGCTAATGTTGCAAACGGCCAGTGTCTCGGTCGCGAACCACTCTTACCGACAGGTCTTAGTCCAGGCTGGGCCGGTTTCGATAGTTCTGTACCATTCGACTTTGGATTCGGCGGTCCAGGGATTGGCTTCAATACATTCGCACCTCCAAACGGCTTAGCAGCTTCTTATGGCGGAGGACTAACAGTTACCAGTTCCTCCCCCATTGCTCCAACAGGATTGACAGTTACTTCTGAAAATACTATCGAAGGCACGCTGTCTCTTACCGGACAGCTACCATTCTTAGGTGCTGTGTCTGCCGAAGGTAAATTCCCTTCTGTTGGCGTCGGATCTGTAACTTATGGATGTGGAGACGGTATTATTGGTATCACCGCAGAAAACCCAGTCATTCCCTTAGCTTCAGGATACGGAAATCTTGGTGTTCCATACAATAGCAGAGGTTATGGTCCAGTTTATTAA

Protein

MNSIQVSFQSRFRKANANVANGQCLGREPLLPTGLSPGWAGFDSSVPFDFGFGGPGIGFNTFAPPNGLAASYGGGLTVTSSSPIAPTGLTVTSENTIEGTLSLTGQLPFLGAVSAEGKFPSVGVGSVTYGCGDGIIGITAENPVIPLASGYGNLGVPYNSRGYGPVY

Similarity

Belongs to the chorion protein family.

Uniprot

H9J161 H9JJL8 A0A0K2S2X8 A0A0K2S3R0

Pubmed

19121390

EMBL

BABH01031331 BABH01031332 AB999997 BAS21369.1 BABH01017345 BAS21469.1 + More
BAS21485.1

Proteomes

UP000005204

PRIDE

H9J161 H9JJL8

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

H9J161 H9JJL8 A0A0K2S2X8 A0A0K2S3R0

KEGG

101736313 no KO assigned | (RefSeq) BmCho-4; chorion class CB protein M5H4-like

GO

GO:0042600 GO:0007275 GO:0005213 GO:0007304 GO:0005524 GO:0006418 GO:0005737 GO:0006559 GO:0004887 GO:0016021

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12165

Exp number, first 60 AAs:

0.0317

Total prob of N-in:

0.11656

outside

1 - 167

Pi

296.037113

Theta

180.897189

Tajima's D

2.002637

CLR

0

CSRT

0.88305584720764

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics