Gene

KWMTBOMO00725  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003237

Annotation

PREDICTED:_G_patch_domain-containing_protein_4_[Papilio_machaon]

Location

Bomo_Chr2(+):1575726-1577440      View in EpiBrowser

Full name

G patch domain-containing protein 4      

Location in the cell

Cytoplasmic   Reliability : 1.945 Nuclear   Reliability : 2.006

CDS

ATGGATTTTGCTAGAAAGCAGCTGGAGAAATACGGTTGGACCGATGGTAAAGGCTTAGGTAAACACGAGAACGGCATTTCCGAGGCGCTGAAACCAAAACTGAAGCGCAGTGTGACCGGAATCGGTCATGACCCTGCTGCAGAATTCAACGAACATTGGTGGAGTGTGCTCTACAATAAAGCAGCCGAAAATGTCCAGGTCCAGGATAAAAATGGTAAAACGAAAAAAATCAAAATCAAAGATGACTTCAACATATCAACGAACACTTGGCAAATTGATAAGAAACCTAAAAACGGCAAAGGGAAACAGTATTCTGAAAATTTTATACGCACTGAAGTACTGACCAAAGGTGGAGGGAAGACGGAGAATGTAAAAGAGTGTGATAGTCACGAGGAGAACAACGGAGGTTTAGTTAAAATGACCGATGAAGAGTTGTTTGCTGCTTGCGAAGGTCGGACGGCTCATAAGTAA

Protein

MDFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEHWWSVLYNKAAENVQVQDKNGKTKKIKIKDDFNISTNTWQIDKKPKNGKGKQYSENFIRTEVLTKGGGKTENVKECDSHEENNGGLVKMTDEELFAACEGRTAHK

Keywords

Acetylation   Complete proteome   Isopeptide bond   Phosphoprotein   Reference proteome   Ubl conjugation   Alternative splicing   Coiled coil  

Feature

chain  G patch domain-containing protein 4
splice variant  In isoform 2.

Uniprot

H9J150   A0A194QZA5   A0A2A4JMY0   A0A2W1BKJ6   A0A194PZ84   A0A0L7KSE9   + More
A0A212FDK9   A0A1E1WMX2   S4NIE6   D6WQ91   U4UHF8   N6T6U7   A0A067RBY7   F7FIJ3   A0A1S3GBF3   A0A2J7Q2T1   A0A1W4X9L1   F6X2Z8   B4NFC4   A0A1A9WZ28   T1GK11   B3M1K6   A0A2Y9IH79   A0A2Y9IKK1   A0A0A6YWB3   A0A2Y9ICW8   A0A2U3YL62   A0A2Y9ICX6   I3N611   D2HW77   G1M8E8   B4M5U8   G1U342   A0A250Y0K8   B3P7R8   A0A2Y9GEZ3   M3XYF1   A0A2Y9RXP3   Q566R3   Q3TFK5-2   A0A3L7IGV4   A0A091CYJ3   B4GN58   A0A3B0K5C0   A0A2K5EQX6   Q3TFK5   A0A0K8UXT1   A0A384CIY4   A0A034WIA8   A0A1W4U6D6   A0A2Y9GJK5   A0A0C9Q010   L5JTH3   A0A2K5EQX9   G1PDZ8   B5DX06   Q2KJE1   L8ICV2   A0A2U3W4V8   M3W644   A0A1I8MWK7   A0A0A0MRK1   E9PAV9   A0A1U7SYI8   B4K627   A0A2R8ZZ70   H2Q099   W5P7Z9   A0A2I3GGP0   A0A0P6J915   F6QN05   A8KAG1   Q5T3I0   Q5T3I0-3   A0A2I2YZ82   A0A1U7QW57   H2N5C6   B4PNB3   A0A2J8VGY6   A0A2J8K5C5   A0A2K6JQ14   A0A1S3AIH9   A0A1A6GGU4   B4I002   H0WUQ8   A0A2K6RLT4   A0A2K5S7M4   I7GLG4   A0A2K5NN86   A0A2K5UST5   F7H7A3   A0A1B0DAS3   A0A096N0T5   B4QSK4   A0A2K6T9F4   A0A2K5ZI07   Q9V9Z8   F7I457   A0A2K6RLR7   A0A1D5R303  

Pubmed

19121390    26354079    28756777    26227816    22118469    23622113    + More
18362917    19820115    23537049    24845553    17495919    17994087    17242355    19468303    20010809    21993624    28087693    15489334    16141072    21183079    29704459    24813606    25348373    23258410    15632085    22751099    17975172    25315136    16710414    18669648    19413330    20068231    21269460    21406692    22814378    23186163    28112733    22722832    16136131    20809919    12481130    15114417    14702039    16712791    22398555    17550304    25362486    17194215    17431167    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01031375    BABH01031376    KQ460890    KPJ10873.1    NWSH01001044    PCG72944.1    + More
KZ150065    PZC74174.1    KQ459593    KPI96465.1    JTDY01006234    KOB66178.1    AGBW02009033    OWR51814.1    GDQN01002843    JAT88211.1    GAIX01014104    JAA78456.1    KQ971354    EFA06944.1    KB632356    ERL93409.1    APGK01041544    KB740994    ENN75954.1    KK852558    KDR21406.1    NEVH01019077    PNF22890.1    CH964251    EDW82991.2    CAQQ02104370    CH902617    EDV43297.1    AC137525    AGTP01066611    AGTP01066612    AGTP01066613    GL193527    EFB18488.1    ACTA01187656    ACTA01195654    CH940652    EDW59024.1    AAGW02000400    GFFV01002767    JAV37178.1    CH954182    EDV52976.1    AEYP01094692    BC093381    AK018306    AK017310    AK169111    BC019490    RAZU01000055    RLQ77200.1    KN123483    KFO24884.1    CH479186    EDW39184.1    OUUW01000005    SPP80816.1    GDHF01020913    JAI31401.1    GAKP01005444    JAC53508.1    GBYB01007163    JAG76930.1    KB031119    ELK02734.1    AAPE02034962    CM000070    EDY67435.1    BC105388    JH881456    ELR54285.1    AANG04002876    AL365181    CH933806    EDW16264.1    AJFE02072149    AACZ04025361    AMGL01004893    ADFV01183812    GEBF01004520    JAN99112.1    AK293026    BAF85715.1    AK000256    AK125763    BC032436    BC040147    BC056904    CB109133    CABD030006729    ABGA01053093    NDHI03003420    PNJ56785.1    CM000160    EDW99195.1    PNJ56786.1    NBAG03000392    PNI30224.1    PNI30225.1    LZPO01097113    OBS64995.1    CH480819    EDW53609.1    AAQR03118949    AAQR03118950    AB171211    BAE88274.1    AQIA01002177    JSUE03002580    AJVK01029277    AJVK01029278    AHZZ02017003    CM000364    EDX15101.1    AE014297    AAF57130.2   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000037510    UP000007151    + More
UP000007266    UP000030742    UP000019118    UP000027135    UP000002280    UP000081671    UP000235965    UP000192223    UP000007798    UP000091820    UP000015102    UP000007801    UP000248482    UP000000589    UP000245341    UP000005215    UP000008912    UP000008792    UP000001811    UP000008711    UP000248481    UP000000715    UP000248480    UP000002494    UP000273346    UP000028990    UP000008744    UP000268350    UP000233020    UP000261680    UP000291021    UP000192221    UP000010552    UP000001074    UP000001819    UP000009136    UP000245340    UP000011712    UP000095301    UP000005640    UP000189704    UP000009192    UP000240080    UP000002277    UP000002356    UP000001073    UP000008144    UP000001519    UP000189706    UP000001595    UP000002282    UP000233180    UP000079721    UP000092124    UP000001292    UP000005225    UP000233200    UP000233040    UP000233060    UP000233100    UP000006718    UP000092462    UP000028761    UP000000304    UP000233220    UP000233140    UP000000803    UP000008225   

PRIDE

H9J150    Q566R3    Q3TFK5    Q2KJE1    A0A0A0MRK1    E9PAV9    + More
A8KAG1    Q5T3I0    Q9V9Z8   

Pfam

PF01585   G-patch

Interpro

IPR000467   G_patch_dom       

ProteinModelPortal

H9J150   A0A194QZA5   A0A2A4JMY0   A0A2W1BKJ6   A0A194PZ84   A0A0L7KSE9   + More
A0A212FDK9   A0A1E1WMX2   S4NIE6   D6WQ91   U4UHF8   N6T6U7   A0A067RBY7   F7FIJ3   A0A1S3GBF3   A0A2J7Q2T1   A0A1W4X9L1   F6X2Z8   B4NFC4   A0A1A9WZ28   T1GK11   B3M1K6   A0A2Y9IH79   A0A2Y9IKK1   A0A0A6YWB3   A0A2Y9ICW8   A0A2U3YL62   A0A2Y9ICX6   I3N611   D2HW77   G1M8E8   B4M5U8   G1U342   A0A250Y0K8   B3P7R8   A0A2Y9GEZ3   M3XYF1   A0A2Y9RXP3   Q566R3   Q3TFK5-2   A0A3L7IGV4   A0A091CYJ3   B4GN58   A0A3B0K5C0   A0A2K5EQX6   Q3TFK5   A0A0K8UXT1   A0A384CIY4   A0A034WIA8   A0A1W4U6D6   A0A2Y9GJK5   A0A0C9Q010   L5JTH3   A0A2K5EQX9   G1PDZ8   B5DX06   Q2KJE1   L8ICV2   A0A2U3W4V8   M3W644   A0A1I8MWK7   A0A0A0MRK1   E9PAV9   A0A1U7SYI8   B4K627   A0A2R8ZZ70   H2Q099   W5P7Z9   A0A2I3GGP0   A0A0P6J915   F6QN05   A8KAG1   Q5T3I0   Q5T3I0-3   A0A2I2YZ82   A0A1U7QW57   H2N5C6   B4PNB3   A0A2J8VGY6   A0A2J8K5C5   A0A2K6JQ14   A0A1S3AIH9   A0A1A6GGU4   B4I002   H0WUQ8   A0A2K6RLT4   A0A2K5S7M4   I7GLG4   A0A2K5NN86   A0A2K5UST5   F7H7A3   A0A1B0DAS3   A0A096N0T5   B4QSK4   A0A2K6T9F4   A0A2K5ZI07   Q9V9Z8   F7I457   A0A2K6RLR7   A0A1D5R303  

KEGG

101739259    no KO assigned | (RefSeq) G patch domain-containing protein 4

GO

GO:0003676   GO:0002244   GO:0003723   GO:0006431   GO:0000166   GO:0004812   GO:0005524   GO:0006418   GO:0005737   GO:0006559   GO:0004887   GO:0016021  

Length:

156

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.27898

outside

1  -  156

 

 

Pi

199.840041

Theta

175.258745

Tajima's D

0.116677

CLR

0

CSRT

0.40077996100195

Interpretation

Uncertain