Gene

KWMTBOMO00724

Pre Gene Modal

BGIBMGA003236

Annotation

PREDICTED:_putative_gamma-glutamylcyclotransferase_CG2811_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr2(+):1570016-1574840      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.926 Nuclear   Reliability : 1.292

CDS

ATGGTGCACAAAGTATTTGTTTATGGTACTTTAAAAAGAAATGAACCGAATCATGGCACCATGACGAACCCAGAGAACGGGGTAGCGACTTTTATAGCTGAAGGAATGACAAAAGAAAAGTATCCGTTGATCATAGCAACAAAATACAATGTACCATTTCTATTGCACAGTCCCGGAACTGGTTATAATGTGAAAGGTGAAATATATGAAGTCGACGATAAAATGTTGTCGAATCTTGATATTTTGGAAGATCACCCTAATTGTTACATCAGAGATAAGAATGACATAGTCCTTACGGATTCTACCCATAGAACTGTAATGAAATGCTGGGTGTATTTCCTAAAAATGTTTAAACCGGAATTACTATCGAAGCCTTTTCTGGAGGACTACAAGTCTGAAGGCGACCACGGGATGCGCTATTGCGAAAGTCAGGACGAATATTGTACTGATGAGGATATGAACGAAATAATTGAAAACGTAAATTGA

Protein

MVHKVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDSTHRTVMKCWVYFLKMFKPELLSKPFLEDYKSEGDHGMRYCESQDEYCTDEDMNEIIENVN

Uniprot

H9J149   S4PAX8   A0A212FDM6   A0A2H1WJM2   A0A2W1BKG4   A0A2A4JLL5   + More
A0A194QZJ2   A0A2A4JLJ1   A0A2A4JMK3   A0A1W4W7U8   D6WQ54   E0VMG4   N6SYE2   A0A2J7RK21   A0A1B6LGZ0   A0A0V0GA40   A0A1W4W7U4   A0A1W4WI81   J3JW54   A0A067R9G5   A0A0A9VUD7   A0A224XMG3   A0A226EV98   A0A1S3ICX3   A0A2R7VR11   T1GP59   A0A232F4L9   A0A182PYE0   A0A1S3IAJ8   A0A0P4VPS1   R4FLY3   A0A131YHY6   A0A0A9VXG6   A0A1V9XIC3   A0A2P8Z957   A0A1B6I8J7   A0A034VVW6   A0A1S3IAU3   A0A0L7R6I1   V9IJ74   A0A088AA33   A0A1I8Q755   A0A023F7A0   A0A2M4CNS9   A0A2M4C199   A0A0K8VT34   A0A026WKP8   A0A2M3ZHS5   A0A034VRP7   A0A3L8DBN1   A0A2A3EH51   A0A1I8NIG1   W5JL53   A0A1I8NIF0   A0A2M3Z8B1   A0A131XL02   A0A0K8RA16   A0A1D2MF52   A0A0N0BKI4   A0A2M4C193   A0A131XYK3   A0A2M3Z7G2   A0A2M4CNL6   B7QKW7   A0A2M3Z7P0   A0A1Y1K5K6   A0A2M4C179   A0A2M4C2I9   A0A2M4C253   A0A0K8WFA4   F4WJ53   A0A023FRI4   A0A131YTH3   A0A0P5HQX9   A0A0P5ZL53   A0A0P6E3C8   A0A0J7L0S7   A0A0P6F010   A0A0P5PG53   A0A293MW06   A0A0P6F335   A0A023G7J6   A0A2M3ZID4   A0A0P5MJH4   A0A0N8ECL6   A0A0P6JA11   G3MSE7   A0A2M4APL2   A0A182MPN0   A0A195BNH9   A0A2M4AQA8   A0A1J1IIA9   A0A2M4AQ81   T1JG34   A0A158P462   A0A0L0CB68   A0A0M4EI35   A0A0P4XXK9   A0A0N4Y6Q0   A0A084WUF9  

Pubmed

19121390    23622113    22118469    28756777    26354079    18362917    + More
19820115    20566863    23537049    22516182    24845553    25401762    26823975    28648823    27129103    26830274    28327890    29403074    25348373    25474469    24508170    30249741    25315136    20920257    23761445    28049606    27289101    28004739    21719571    22216098    21347285    26108605    24438588   

EMBL

BABH01031376    GAIX01006212    JAA86348.1    AGBW02009033    OWR51813.1    ODYU01009060    + More
SOQ53207.1    KZ150065    PZC74175.1    NWSH01001044    PCG72947.1    KQ460890    KPJ10872.1    PCG72945.1    PCG72948.1    KQ971354    EFA06926.1    DS235307    EEB14570.1    APGK01052258    KB741211    KB632263    ENN72809.1    ERL90943.1    NEVH01002981    PNF41182.1    GEBQ01016994    JAT22983.1    GECL01001304    JAP04820.1    BT127472    AEE62434.1    KK852657    KDR19227.1    GBHO01043722    GDHC01016763    JAF99881.1    JAQ01866.1    GFTR01002761    JAW13665.1    LNIX01000002    OXA61140.1    KK854010    PTY09271.1    CAQQ02149898    NNAY01000957    OXU25734.1    GDKW01002216    JAI54379.1    ACPB03014878    GAHY01001939    JAA75571.1    GEDV01010851    JAP77706.1    GBHO01043723    GDHC01001099    JAF99880.1    JAQ17530.1    MNPL01010159    OQR73300.1    PYGN01000142    PSN53029.1    GECU01024469    GECU01020239    JAS83237.1    JAS87467.1    GAKP01012959    GAKP01012957    JAC45995.1    KQ414646    KOC66485.1    JR049809    AEY61085.1    GBBI01001592    JAC17120.1    GGFL01002741    MBW66919.1    GGFJ01009934    MBW59075.1    GDHF01010306    JAI42008.1    KK107167    EZA56241.1    GGFM01007363    MBW28114.1    GAKP01012963    GAKP01012961    JAC45991.1    QOIP01000010    RLU17289.1    KZ288249    PBC31123.1    ADMH02000766    ETN65107.1    GGFM01004015    MBW24766.1    GEFH01002225    JAP66356.1    GADI01006499    JAA67309.1    LJIJ01001469    ODM91630.1    KQ435700    KOX80548.1    GGFJ01009936    MBW59077.1    GEFM01005000    JAP70796.1    GGFM01003715    MBW24466.1    GGFL01002742    MBW66920.1    ABJB010538506    DS962443    EEC19489.1    GGFM01003792    MBW24543.1    GEZM01095187    JAV55470.1    GGFJ01009935    MBW59076.1    GGFJ01010372    MBW59513.1    GGFJ01010228    MBW59369.1    GDHF01014639    GDHF01002552    JAI37675.1    JAI49762.1    GL888181    EGI65823.1    GBBK01001149    JAC23333.1    GEDV01006705    JAP81852.1    GDIQ01223816    JAK27909.1    GDIP01225555    GDIP01045777    JAM57938.1    GDIQ01068377    JAN26360.1    LBMM01001575    KMQ96064.1    GDIQ01055631    JAN39106.1    GDIQ01129053    JAL22673.1    GFWV01019403    MAA44131.1    GDIQ01055630    JAN39107.1    GBBM01005651    JAC29767.1    GGFM01007576    MBW28327.1    GDIQ01155695    JAK96030.1    GDIQ01039940    JAN54797.1    GDIQ01010531    JAN84206.1    JO844798    AEO36415.1    GGFK01009410    MBW42731.1    AXCM01001000    KQ976435    KYM87051.1    GGFK01009581    MBW42902.1    CVRI01000054    CRK99928.1    GGFK01009609    MBW42930.1    JH432192    ADTU01008664    JRES01000655    KNC29496.1    CP012524    ALC42360.1    GDIP01235403    JAI87998.1    UYSL01020597    VDL75365.1    ATLV01027083    KE525423    KFB53853.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000192223    UP000007266    + More
UP000009046    UP000019118    UP000030742    UP000235965    UP000027135    UP000198287    UP000085678    UP000015102    UP000215335    UP000075885    UP000015103    UP000192247    UP000245037    UP000053825    UP000005203    UP000095300    UP000053097    UP000279307    UP000242457    UP000095301    UP000000673    UP000094527    UP000053105    UP000001555    UP000007755    UP000036403    UP000075883    UP000078540    UP000183832    UP000005205    UP000037069    UP000092553    UP000038043    UP000271162    UP000030765   

PRIDE

H9J149   

Pfam

PF06094   GGACT

Interpro

IPR039126   GGACT        + More
IPR013024   GGCT-like       
IPR036568   GGCT-like_sf       
IPR009288   AIG2-like       

SUPFAM

SSF110857   SSF110857       

CDD

cd06661  GGCT_like

ProteinModelPortal

H9J149   S4PAX8   A0A212FDM6   A0A2H1WJM2   A0A2W1BKG4   A0A2A4JLL5   + More
A0A194QZJ2   A0A2A4JLJ1   A0A2A4JMK3   A0A1W4W7U8   D6WQ54   E0VMG4   N6SYE2   A0A2J7RK21   A0A1B6LGZ0   A0A0V0GA40   A0A1W4W7U4   A0A1W4WI81   J3JW54   A0A067R9G5   A0A0A9VUD7   A0A224XMG3   A0A226EV98   A0A1S3ICX3   A0A2R7VR11   T1GP59   A0A232F4L9   A0A182PYE0   A0A1S3IAJ8   A0A0P4VPS1   R4FLY3   A0A131YHY6   A0A0A9VXG6   A0A1V9XIC3   A0A2P8Z957   A0A1B6I8J7   A0A034VVW6   A0A1S3IAU3   A0A0L7R6I1   V9IJ74   A0A088AA33   A0A1I8Q755   A0A023F7A0   A0A2M4CNS9   A0A2M4C199   A0A0K8VT34   A0A026WKP8   A0A2M3ZHS5   A0A034VRP7   A0A3L8DBN1   A0A2A3EH51   A0A1I8NIG1   W5JL53   A0A1I8NIF0   A0A2M3Z8B1   A0A131XL02   A0A0K8RA16   A0A1D2MF52   A0A0N0BKI4   A0A2M4C193   A0A131XYK3   A0A2M3Z7G2   A0A2M4CNL6   B7QKW7   A0A2M3Z7P0   A0A1Y1K5K6   A0A2M4C179   A0A2M4C2I9   A0A2M4C253   A0A0K8WFA4   F4WJ53   A0A023FRI4   A0A131YTH3   A0A0P5HQX9   A0A0P5ZL53   A0A0P6E3C8   A0A0J7L0S7   A0A0P6F010   A0A0P5PG53   A0A293MW06   A0A0P6F335   A0A023G7J6   A0A2M3ZID4   A0A0P5MJH4   A0A0N8ECL6   A0A0P6JA11   G3MSE7   A0A2M4APL2   A0A182MPN0   A0A195BNH9   A0A2M4AQA8   A0A1J1IIA9   A0A2M4AQ81   T1JG34   A0A158P462   A0A0L0CB68   A0A0M4EI35   A0A0P4XXK9   A0A0N4Y6Q0   A0A084WUF9  

PDB

1VKB     E-value=2.23976e-29,     Score=316

KEGG

101739395    K19761 gamma-glutamylaminecyclotransferase [EC:2.3.2.-] | (RefSeq) putative gamma-glutamylcyclotrans

GO

GO:0061929   GO:0016740   GO:0042219  

PANTHER

PTHR12510  

Length:

161

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00712999999999999

Exp number, first 60 AAs:

0.00594

Total prob of N-in:

0.14449

outside

1  -  161

 

 

Pi

193.247123

Theta

151.534499

Tajima's D

0.705395

CLR

147.534818

CSRT

0.580170991450427

Interpretation

Uncertain