SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00723  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003258
Annotation
pyruvate_dehydrogenase_kinase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.084 Mitochondrial   Reliability : 1.742
 

Sequence

CDS
ATGACCCGCGACTCTTGGCGCGTCAATACAGGTTTACGCGATACGGAAGGTCTGAACGCTTGCGAGAGCAAATCATTCACGTTCCTAAAGAAGGAGCTACCAGTCAGGCTCGCGAACATAATGAAGGAGATAGCGTTACTCCCTGAGAACCTACTTCGAATGCCTTCGGTGGGTTTAGTCAACCAATGGTACGAACGCTCATTCGAGGAAATAACACGCTTTGAACAGATGGAACCAGATCCTCCGACGCTGACCCAGTTCTGCGAACGTCTTGTCCACATAAGGAACCGGCACGCTGACGTCGTTCAGACGATGGCCCAGGGTGTGCTAGAGCTGAAAGAGTCTCACGAAGTTGATCCCGGAACGGAGAACTCCATACAATACTTCCTGGACAGATTCTACATGAGTCGGATATCTATTCGGATGCTTATTAACCAGCACACTCTGTTGTTTGGCGAGCAGCTTGGCGGCAAGCAGGCGTCGGTCAATGGGATCGGCAATGGTGGCCGTCACATCGGCTCCATAGACCCGGCCTGCGACGTCGTGGCCGTCGTTAGAGACGCCTACGAGAACGCAAGGTTCCTCTGCGATAGATACTACCTAGCCTCACCAGAGTTGGAGGTACTGCAGGACGGAGTGTCGAGTCTGCGCCCGATGCCCATAGTGTATGTGCCCTCGCACCTCTACCACATGCTGTTTGAGCTATTCAAGAATGCCATGAGGGCCGTCATGGAGAACCACGGCACCGCCCCACCGCCGATACAAGTTAACCTCGTCAACGGGAAAGAGGACATATCCGTTAAGATGTCTGATCGCGGCGGCGGCATCCCGCGCAGCGTGTCGGAGCTTCTGTTCAAGTACATGTACAGCACGGCGCCGCAGCCCTCCAAGTCCGACTCGCACACGGTGCCGCTAGCGGGTTACGGATACGGGCTGCCCATCTCTCGCCTGTACGCGCGGTACTTCCACGGCGACCTGGTGCTGGTATCGTGCGAGGGTTACGGCACGGACGCCGTCATCTACCTCAAGGCTCTAACGAACGAAGCCAACGAACTACTGCCGGTTTTCAATAAGACGTCTTCGAAGTTCTACCGCCCCTCGTCCCAGCTGGCGGACTGGTCCGGCACCCTCAACTCCTCGAATCAGTGCAGGAGGGAGAAAGTGTCTCCGCTCTCATCACCGATATCGCACAGCCTATAG
Protein
MTRDSWRVNTGLRDTEGLNACESKSFTFLKKELPVRLANIMKEIALLPENLLRMPSVGLVNQWYERSFEEITRFEQMEPDPPTLTQFCERLVHIRNRHADVVQTMAQGVLELKESHEVDPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPACDVVAVVRDAYENARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHGTAPPPIQVNLVNGKEDISVKMSDRGGGIPRSVSELLFKYMYSTAPQPSKSDSHTVPLAGYGYGLPISRLYARYFHGDLVLVSCEGYGTDAVIYLKALTNEANELLPVFNKTSSKFYRPSSQLADWSGTLNSSNQCRREKVSPLSSPISHSL

Summary

EMBL
EU249373    ABY76060.1    BABH01031383    KQ460890    KPJ10870.1    ODYU01008076    + More
SOQ51370.1    NWSH01000062    PCG80047.1    KQ459593    KPI96461.1    AGBW02009910    OWR49586.1    NEVH01002981    PNF41302.1    GEDC01029767    GEDC01009348    JAS07531.1    JAS27950.1    KQ971351    EFA06557.2    KK107167    EZA56243.1    GECZ01022868    GECZ01021935    GECZ01020361    JAS46901.1    JAS47834.1    JAS49408.1    KQ981382    KYN42301.1    GECU01033814    JAS73892.1    KQ978615    KYN29829.1    QOIP01000010    RLU17287.1    KQ977279    KYN04097.1    KQ976435    KYM87053.1    ADTU01026166    GEZM01057705    JAV72131.1    KQ982959    KYQ48753.1    APGK01054105    APGK01054106    KB741247    KB632281    ENN72016.1    ERL91354.1    GEBQ01024982    GEBQ01003801    JAT14995.1    JAT36176.1    UFQT01000186    SSX21311.1    GALX01004450    JAB64016.1    KQ434822    KZC07111.1    GALX01004451    JAB64015.1    AXCM01000163    GGMR01000030    MBY12649.1    GBGD01001662    JAC87227.1    GGFJ01006047    MBW55188.1    NNAY01000957    OXU25735.1    GGFK01006720    MBW40041.1    CH477436    EAT40947.1    GGFL01001991    MBW66169.1    GGFL01001992    MBW66170.1    GFXV01005787    MBW17592.1    AAAB01008980    JXUM01036156    JXUM01036157    JXUM01036158    GAPW01001794    KQ561085    JAC11804.1    KXJ79758.1    GBBI01002390    GEMB01002970    JAC16322.1    JAS00233.1    KZ288249    PBC31121.1    EAT40944.1    EAT40945.1    GGFJ01005821    MBW54962.1    GGFJ01006082    MBW55223.1    GANO01001414    JAB58457.1    ADMH02001363    ETN62831.1    GGFM01003905    MBW24656.1    GGFK01006618    MBW39939.1    GGFM01007381    MBW28132.1    GFDL01002441    JAV32604.1    GDKW01002253    JAI54342.1    KQ414646    KOC66483.1    DS232274    EDS38909.1    GFTR01005841    JAW10585.1    GDAI01002204    JAI15399.1    DS235867    EEB19424.1    APCN01005279    GALA01001104    JAA93748.1    GECL01002428    JAP03696.1    JRES01000678    KNC29263.1    KA646693    KA649580    KA649601    AFP64230.1    GALA01001099    JAA93753.1    GBXI01009533    JAD04759.1    GALA01001141    JAA93711.1    GAMC01015162    GAMC01015161    JAB91393.1    KA649600    KA649602    AFP64231.1    ABLF02013322    GDHF01017629    JAI34685.1    JXJN01012881    JXJN01026246    CVRI01000051    CRK99581.1    GBHO01032524    GBRD01016834    GBRD01008185    GBRD01008184    JAG11080.1    JAG48993.1    GAKP01017320    GAKP01017319    JAC41632.1    EZ422500    ADD18776.1    CRK99582.1    GL435087    EFN74040.1    CH902619    EDV35467.1    KPU75675.1    KPU75676.1    CH963850    EDW74720.1    CM000157    EDW89505.2   
Pfam
PF10436   BCDHK_Adom3        + More
PF02518   HATPase_c
Interpro
IPR018955   BCDHK/PDK_N        + More
IPR005467   His_kinase_dom       
IPR039028   BCKD/PDK       
IPR036890   HATPase_C_sf       
IPR003594   HATPase_C       
IPR036784   AK/P_DHK_N_sf       
SUPFAM
SSF55874   SSF55874        + More
SSF69012   SSF69012       
Gene 3D
PDB
2Q8H     E-value=7.90462e-118,     Score=1084

Ontologies

Topology

Length:
399
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02554
Exp number, first 60 AAs:
0.0023
Total prob of N-in:
0.05458
outside
1  -  399
 
 

Population Genetic Test Statistics

Pi
231.666651
Theta
150.92049
Tajima's D
2.008895
CLR
0.101695
CSRT
0.88415579221039
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 ISNFFNVIR 100.00 2e-05
26280517 HIGHMIPFMFTK 100.00 2e-05
28467696 HIFEPKPVEDDYEIDAAPK 100.00 2e-05
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号