Gene

KWMTBOMO00713

Pre Gene Modal

BGIBMGA003266

Annotation

PREDICTED:_ras-related_protein_Rab-31-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr2(-):1035892-1059774      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.34

CDS

ATGAAGGTTATAGAAGCCAAAATAGTTGTACTTGGATCACAAGGTGTGGGCAAAACGAGCTTGGTCGTGCGTTACATCGGGAAGATGTTCTCGAAGCACGTCTCACCTACCATCGGAGCGTCTTTCTTCACGTGTAACATTAGCGTGGAAAACGCAAGAGTCAAACTCCAGGTCTGGGACACGGCTGGTCAGGAGAGGTTCAGGTCAATGGCCCCGATGTACTACAGAAATGCCAACGCGGCGCTCCTGGTCTTCGACATCACGAGCATGCAAAGCTTCACAGCCATCAAGGGCTGGGTCAAAGAACTGCAAAGCAATGTTCCAGAGGCGATGGTGTTGTCCGTTGTCGGCAATAAAAGCGATCTGGAATCCCTGAGAGCGGTCCCTTACAATGAGGCGACGCAGTATGCCGCCACCATCGGGGCCGCTTACTGTGAAACGTCCGCGCTGCACGATCAGGGCATCGAAAAAGTATTCAAGAATACCGCGATATCACTGCTGCAACTGTCCTCCAGTAACCTGGTCTCCTCGCTGCGGTCCTATGATTCAACAGAAGAGAAAATTCCAACAGCCAGCACAACCAACGACCGCGCGACCCACACCGCCAAAGTGGAGCTGCCGGCCTGGAGCATCGACAGCATAGCGCACGGGGAACCCCAGAAAAACATGTGTTGCTAG

Protein

MKVIEAKIVVLGSQGVGKTSLVVRYIGKMFSKHVSPTIGASFFTCNISVENARVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITSMQSFTAIKGWVKELQSNVPEAMVLSVVGNKSDLESLRAVPYNEATQYAATIGAAYCETSALHDQGIEKVFKNTAISLLQLSSSNLVSSLRSYDSTEEKIPTASTTNDRATHTAKVELPAWSIDSIAHGEPQKNMCC

Uniprot

A0A2A4JL35   A0A2W1BD71   H9J179   A0A067QWU5   A0A2J7Q481   A0A1B6IQE1   + More
A0A1B6GC79   A0A1B6M795   A0A1B6DII9   A0A182KNX3   Q7Q5X1   A0A084WEN7   A0A182Q6J5   A0A2M3ZJX4   W5JPT3   A0A182URV8   A0A2M4AUH8   A0A1Q3F4R1   A0A182JAX6   A0A2R7VZ11   B0WDP3   A0A0A9Y1I5   A0A069DX93   A0A161MQX7   A0A224XWM0   A0A2H1VUG7   Q16QU6   A0A1S4EKC9   A0A0P4VHI5   U5EU60   A0A023EJ43   A0A182WLL2   A0A182NK28   T1IGN4   A0A182RDL6   A0A1L8DV73   D6WRD4   A0A182FH54   V5GVB5   A0A182MKG6   A0A2M4BYV6   A0A182TH85   A0A182I1C0   A0A1B0CN12   A0A0B7AZF3   A0A0B7AZY4   A0A3L8DB79   E9IN90   K7J330   A0A195FPD5   A0A336KFX5   A0A0L7R781   A0A182YKT8   A0A182H3U4   A0A0J7KUS6   A0A088AST5   A0A1L8DV55   A0A1B0DNY1   A0A232F9Y1   A0A182SZQ8   A0A0C9QNV1   E2AIC1   A0A0K8TSD2   A0A158NQ61   B4J7F3   F4WMQ4   A0A0L8GJV7   A0A0M8ZP91   B4KSG6   A0A0M4E5S3   A0A087UII2   A0A293N1N7   A0A0A1XCI8   B4LMD6   A0A0K8V9R9   Q28ZK9   B4GHM1   W8BEU9   A0A3B0J1I4   A0A1S3IRY7   T1J3S8   B3MFG1   B4I8N6   A0A182JXR6   A0A1W4U9Z4   A0A0J9U9B7   B4NMQ1   Q9V3C2   A0A1B0AYR2   B3NPM7   D3TQT4  

Pubmed

28756777    19121390    24845553    20966253    12364791    14747013    + More
17210077    24438588    20920257    23761445    25401762    26823975    26334808    17510324    27129103    24945155    18362917    19820115    30249741    21282665    20075255    25244985    26483478    28648823    20798317    26369729    21347285    17994087    21719571    25830018    15632085    24495485    22936249    11102367    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571   

EMBL

NWSH01001198    PCG72153.1    KZ150260    PZC71754.1    BABH01031432    BABH01031433    + More
BABH01031434    BABH01031435    KK853272    KDR09132.1    NEVH01018389    PNF23386.1    GECU01018567    JAS89139.1    GECZ01009743    JAS60026.1    GEBQ01008187    JAT31790.1    GEDC01011831    JAS25467.1    AAAB01008960    EAA10814.3    ATLV01023241    KE525341    KFB48681.1    AXCN02000497    GGFM01007997    MBW28748.1    ADMH02000687    ETN65323.1    GGFK01011114    MBW44435.1    GFDL01012490    JAV22555.1    KK854174    PTY12579.1    DS231899    EDS44742.1    GBHO01017580    GBRD01004584    GDHC01014450    JAG26024.1    JAG61237.1    JAQ04179.1    GBGD01002930    JAC85959.1    GEMB01002040    JAS01139.1    GFTR01003536    JAW12890.1    ODYU01004508    SOQ44463.1    CH477732    EAT36769.1    GDKW01003449    JAI53146.1    GANO01004028    JAB55843.1    GAPW01004652    JAC08946.1    ACPB03012361    GFDF01003771    JAV10313.1    KQ971351    EFA06553.2    GALX01002849    JAB65617.1    AXCM01000789    GGFJ01009051    MBW58192.1    APCN01000049    AJWK01019616    HACG01039313    CEK86178.1    HACG01039312    CEK86177.1    QOIP01000010    RLU17571.1    GL764290    EFZ17962.1    KQ981382    KYN42172.1    UFQS01000305    UFQT01000305    SSX02668.1    SSX23042.1    KQ414646    KOC66616.1    JXUM01108146    KQ565205    KXJ71229.1    LBMM01002900    KMQ94207.1    GFDF01003772    JAV10312.1    AJVK01007825    AJVK01007826    NNAY01000635    OXU27280.1    GBYB01002292    JAG72059.1    GL439754    EFN66832.1    GDAI01000334    JAI17269.1    ADTU01022977    CH916367    EDW01077.1    GL888218    EGI64531.1    KQ421523    KOF77223.1    KQ435936    KOX68320.1    CH933808    EDW09471.1    CP012524    ALC41691.1    KK119957    KFM77171.1    GFWV01021551    MAA46279.1    GBXI01005632    JAD08660.1    CH940648    EDW62031.1    GDHF01024786    GDHF01016615    GDHF01002952    JAI27528.1    JAI35699.1    JAI49362.1    CM000071    EAL25604.1    CH479183    EDW35991.1    GAMC01006705    JAB99850.1    OUUW01000001    SPP74785.1    JH431830    CH902619    EDV36646.1    CH480824    EDW56961.1    CM002911    KMY96045.1    KMY96046.1    CH964282    EDW85640.1    AF209706    AE013599    AY122200    AAF21440.1    AAF47018.1    AAM52712.1    JXJN01005924    CH954179    EDV56818.1    CCAG010000559    EZ423786    ADD20062.1   

Proteomes

UP000218220    UP000005204    UP000027135    UP000235965    UP000075882    UP000007062    + More
UP000030765    UP000075886    UP000000673    UP000075903    UP000075880    UP000002320    UP000008820    UP000079169    UP000075920    UP000075884    UP000015103    UP000075900    UP000007266    UP000069272    UP000075883    UP000075902    UP000075840    UP000092461    UP000279307    UP000002358    UP000078541    UP000053825    UP000076408    UP000069940    UP000249989    UP000036403    UP000005203    UP000092462    UP000215335    UP000075901    UP000000311    UP000005205    UP000001070    UP000007755    UP000053454    UP000053105    UP000009192    UP000092553    UP000054359    UP000008792    UP000001819    UP000008744    UP000268350    UP000085678    UP000007801    UP000001292    UP000075881    UP000192221    UP000007798    UP000000803    UP000092460    UP000008711    UP000092444   

PRIDE

H9J179    Q9V3C2   

Pfam

PF00071   Ras

Interpro

IPR027417   P-loop_NTPase        + More
IPR005225   Small_GTP-bd_dom       
IPR001806   Small_GTPase       
IPR035969   Rab-GTPase_TBC_sf       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF50978   SSF50978       
SSF47923   SSF47923       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2A4JL35   A0A2W1BD71   H9J179   A0A067QWU5   A0A2J7Q481   A0A1B6IQE1   + More
A0A1B6GC79   A0A1B6M795   A0A1B6DII9   A0A182KNX3   Q7Q5X1   A0A084WEN7   A0A182Q6J5   A0A2M3ZJX4   W5JPT3   A0A182URV8   A0A2M4AUH8   A0A1Q3F4R1   A0A182JAX6   A0A2R7VZ11   B0WDP3   A0A0A9Y1I5   A0A069DX93   A0A161MQX7   A0A224XWM0   A0A2H1VUG7   Q16QU6   A0A1S4EKC9   A0A0P4VHI5   U5EU60   A0A023EJ43   A0A182WLL2   A0A182NK28   T1IGN4   A0A182RDL6   A0A1L8DV73   D6WRD4   A0A182FH54   V5GVB5   A0A182MKG6   A0A2M4BYV6   A0A182TH85   A0A182I1C0   A0A1B0CN12   A0A0B7AZF3   A0A0B7AZY4   A0A3L8DB79   E9IN90   K7J330   A0A195FPD5   A0A336KFX5   A0A0L7R781   A0A182YKT8   A0A182H3U4   A0A0J7KUS6   A0A088AST5   A0A1L8DV55   A0A1B0DNY1   A0A232F9Y1   A0A182SZQ8   A0A0C9QNV1   E2AIC1   A0A0K8TSD2   A0A158NQ61   B4J7F3   F4WMQ4   A0A0L8GJV7   A0A0M8ZP91   B4KSG6   A0A0M4E5S3   A0A087UII2   A0A293N1N7   A0A0A1XCI8   B4LMD6   A0A0K8V9R9   Q28ZK9   B4GHM1   W8BEU9   A0A3B0J1I4   A0A1S3IRY7   T1J3S8   B3MFG1   B4I8N6   A0A182JXR6   A0A1W4U9Z4   A0A0J9U9B7   B4NMQ1   Q9V3C2   A0A1B0AYR2   B3NPM7   D3TQT4  

PDB

2FG5     E-value=1.0809e-40,     Score=416

KEGG

101740050    K07890 Ras-related protein Rab-21 | (RefSeq) ras-related protein Rab-31

GO

GO:0005525   GO:0003924   GO:0005623   GO:0032482   GO:0006886   GO:0016192   GO:0055037   GO:0031982   GO:0045202   GO:0007264   GO:0050662   GO:0004420   GO:0008299   GO:0016021   GO:0050661   GO:0006559   GO:0004887  

Length:

225

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.601479999999999

Exp number, first 60 AAs:

0.10042

Total prob of N-in:

0.14820

outside

1  -  225

 

 

Pi

234.12913

Theta

150.865408

Tajima's D

1.929843

CLR

0.095591

CSRT

0.871256437178141

Interpretation

Uncertain