Gene

KWMTBOMO00709

Pre Gene Modal

BGIBMGA003268

Annotation

PREDICTED:_chaoptin_[Bombyx_mori]

Location

Bomo_Chr2(-):922816-943754      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.913

CDS

ATGGTCTACACAATTGTATTTTTTGTATTAGCAACACTGCCACTTTTGAATTCAGAATACATTCCACCCGGTCCTGCATATTCATGCCCGAAGGAGACAACATTATTGTATCCCTGTATTTGTGAGAAAGGAACAGATTCAGGGCTGTATATACGTTGTGAAAATGCAGGTTTGGCTCTTATCAGTGTGGGAATTGGCAACATAGCTGGTATGGGGTTGCCAATAGAGAGACTGTTGCTGAAGGAATGCAAATTTACAAACCTCTTTGGTTCATTACTCCATAGATCGACTGTACGTATCTTGGAGATAGTGGACACACCTATTACGAGCATTGAAGAGTACGCTTTTGCTGGTGTAAACAGAACATTGCAGGAGATATACTTGACAAATACCAAGCTTGTCGATTTTCCTAAGGAGGCTTTTAAGATCTTGGGCAACCTTTCAGTATTGTCTATTGATGGACACCAAATGACTAAATTGAGTAAGGACATGTTCGCAGGCAGTGAAGCTGTGGGAAAACTGGAGAGATTACACCTTGTTAACGGCTTAATATCTGATATACCCATAGAAGCATTTCAGAACCTGCGTAAGTTAAAAAAGTTAGATCTGCACGGAAACAGGCTTGTGTCCTTGAAGAAGAATCAGTTCAAGGGACTCCGGGACACCGATGTCTTGGATCTGAGTCACAACAATATCACGAGGCTGGACGGCACTCACATCGGGGACCTGACCAAGTTGGGCTGGTGCAACGTCAGCCACAACGACATCAAGGAAATACCCCGGGGGATGTTCGCGAGGAACAATCTACTGAAAGTCCTGCATTTGGATAATAATAAATTGAAGAAATTGGACACGAATAGTTTCCGAGGAATGAGGTTTCTGAGGCGTTTATTCCTTCAAGACAATCAGATCTCGGATATAGGCAGGGGGACCTTCTCGGCCGTGACCAGAATAGGCACCGTGGACCTGGCGAGGAATAAAATCAAGAAAGTCGACTATCAAATGTTTCAATCGGTCAAATTTGCTGACACGATAAACTTGGCGGAGAACGAGATAACCGTGATCGAAGCCCAGGCTTTCACGGACCTGTATCTGGCGACGGTGAACGTCTCCCACAACCAGCTCTCCAAGATCGAACCGAAGGCCTTCCAGAACTGCAACAACCTGACCGTGCTGGACTTGCGCTACAACAACCTGACGGTCATCGATAGGAGCGCCTTCGACGAGAACACATACGCGTATGAATTGAATGTCGCCCACAACCACATCACGGATTTCAGTCAGATCCCCATACAGAACATGACGGGCATAAGGATCTTGAATGCGACCTTCAACCAGATCACCGGGATACCGAAAGCGGCGTTTCCCAAACTGTACGAGCTCCACACCGTCGATCTGTCACACAACAACATCAGCGACATCTTCAATGCGGTTTTCCAGAACCTGTTCTCCTTGAGATTCGTGAATCTGAGCCACAACAGCTTGGAGCGCATAAAACCCGCCATGTTCGGCACCCTACCCACCGTCTTGGAGCTGGATCTGTCGCACAACCTGCTGAGTGACGTGTCGAGGGGCGGGCTCGCCAAGCTGGCCAGCTGCCGCCTCCTGGACATGAGCCACAATCAACTGGAGAAGATATTCCAGATACCCATCAGTCTGGGCGAATTGAACGTAGCGCATAACAATCTGAGAGAGATAAAATCGAACACGTGGCCTTCGATGAACGCTCTGCTGCGTCTCAACCTGTCGGCCAACATGCTCGGCGACATGCTCGCCAGCGACAGCTTCTCCAGTCTGCTGACCTTGCAGACTCTGGACTTATCATCGAACGGGCTCACCAGACCGCCGTGGGAGGCCCTGAGCAGTCTGACGAGCTTACAGTATTTATATATGCAGGATAACAATCTGACGTCACTAAGCAAGTCGTCATTTGGAAACCTGCCCACGCTATTCGCGCTGGACCTGTCGCGCAACGCCATAGCTTCTGTGGAGCGCCGCGCTTTCAATGGCCTGCAGCAGCTACTGGACCTCAGGCTGTCAGGGAATCAACTGGAGCACGTCCCCAACGAGGCTTTTAAGGGCCTGGTAGCGCTCAGGAAGCTCGACCTGTCTCACAACTTACTGGAGAAGATCGACAACAAAACGAACGGACTTCTGGATGACTGTCTGTCCTTGGAGACGGTCAACTTGAGTCACAACAACATCGGCTTCCTAACGAAGAAGATGTTCCCGGCGAGCCCCTGGATCCCGTACAGACTGTCGGAGATCGACCTGAGTCACAACTCGCTGGCGGTCGTCACGCACGACATAACGGTGGGCGCGGGGCGCGTGCGGAGGCTGAGTCTGGCCGGCAATTACATCAACGACATCAGGAACAATGTCCTGGGCAACCTGACCTCGCTGGAGACCTTGGACCTTTCGCGGAACAACCTCAAGGACTTAGTGTCTAAAACATCGGAAATGAAATTCTCTTTCCCCGGGAACATAACAGAGCTGTATCTGAATGACAACGAGCTGGAGGATCTCCCGATCAAGGAGCTGATGAAGGCTGACAAACTGACGGTGCTGGACGTCAGGGGCAACCGGTTAACCAGCTTCGACCCCCGCCTGGTCGCGAGGGTCCGAGACCGGGGCTTGCAGGTCTACTTTGAAGGCAACACTTTGTTATGCGACTGCTTCGTTCGGCCCCTGAAGCATTACTTAAACAAACTGTCCCAGACGTACTTGCGCGGCGACGCTAAGTACTCAAACGTGAGCTGCGCTGAGCCTCCGAGCTTGGAGAACGTGAGCATATTGGACGTGGACGAGGAGAGGCTGCTGTGCGCTGGCAACATTGAGACCGACGAGAAGATAAAAGAATATGGCAACACCGCGGACGAGTCATTCAATTTCATAACGGAACCAGACTTGGCCTTCAGGGACATACAGTATTCCCAGGAGGCGATCTACGTGCACTGGTACGTGAGGTCGGCGGGGGATGTAGCCGACACGCAGCTATACGTGCGGGGGCAGGGGGGGGACGTGCTGCACGCCGCGCGCGCCCCCTACACCGCGCGCTCCTACACCGTCCCCCTGGACGCGGGGGTGCGAGGGGCGTTGGGGGGAGGCGGCGCGCTGTGCGTGCAAGCCGTGACGTCAGCGGGCGCGCCCCGACGCTGGTACCCCTCGCAGTGCCAACCAATAAACGGGCGTCTCCACCTATGGCCCAAGACGCTAAACGTGGATAAGCGGAGACTGTCCCGGCCCAGGGGACGCGCCACTAGCAGTGTCCTGGGACTCGTCAGCGACTCTATCCTGATCACGCTGTGCATATTCCTGGGGGTCTGTCTGAAGATAACCGACGTTGAGCTATGA

Protein

MVYTIVFFVLATLPLLNSEYIPPGPAYSCPKETTLLYPCICEKGTDSGLYIRCENAGLALISVGIGNIAGMGLPIERLLLKECKFTNLFGSLLHRSTVRILEIVDTPITSIEEYAFAGVNRTLQEIYLTNTKLVDFPKEAFKILGNLSVLSIDGHQMTKLSKDMFAGSEAVGKLERLHLVNGLISDIPIEAFQNLRKLKKLDLHGNRLVSLKKNQFKGLRDTDVLDLSHNNITRLDGTHIGDLTKLGWCNVSHNDIKEIPRGMFARNNLLKVLHLDNNKLKKLDTNSFRGMRFLRRLFLQDNQISDIGRGTFSAVTRIGTVDLARNKIKKVDYQMFQSVKFADTINLAENEITVIEAQAFTDLYLATVNVSHNQLSKIEPKAFQNCNNLTVLDLRYNNLTVIDRSAFDENTYAYELNVAHNHITDFSQIPIQNMTGIRILNATFNQITGIPKAAFPKLYELHTVDLSHNNISDIFNAVFQNLFSLRFVNLSHNSLERIKPAMFGTLPTVLELDLSHNLLSDVSRGGLAKLASCRLLDMSHNQLEKIFQIPISLGELNVAHNNLREIKSNTWPSMNALLRLNLSANMLGDMLASDSFSSLLTLQTLDLSSNGLTRPPWEALSSLTSLQYLYMQDNNLTSLSKSSFGNLPTLFALDLSRNAIASVERRAFNGLQQLLDLRLSGNQLEHVPNEAFKGLVALRKLDLSHNLLEKIDNKTNGLLDDCLSLETVNLSHNNIGFLTKKMFPASPWIPYRLSEIDLSHNSLAVVTHDITVGAGRVRRLSLAGNYINDIRNNVLGNLTSLETLDLSRNNLKDLVSKTSEMKFSFPGNITELYLNDNELEDLPIKELMKADKLTVLDVRGNRLTSFDPRLVARVRDRGLQVYFEGNTLLCDCFVRPLKHYLNKLSQTYLRGDAKYSNVSCAEPPSLENVSILDVDEERLLCAGNIETDEKIKEYGNTADESFNFITEPDLAFRDIQYSQEAIYVHWYVRSAGDVADTQLYVRGQGGDVLHAARAPYTARSYTVPLDAGVRGALGGGGALCVQAVTSAGAPRRWYPSQCQPINGRLHLWPKTLNVDKRRLSRPRGRATSSVLGLVSDSILITLCIFLGVCLKITDVEL

Uniprot

A0A2H1WSK0   A0A194PTT8   A0A0N1I7S4   A0A182JPP1   A0A182RCS2   D6WRC5   + More
Q17FN7   A0A182L1D1   A0A182W701   A0A1S4GY69   A0A182WTZ7   A0A182VPG8   A0A182HUL3   A0A182GFS2   A0A182F4X7   A0A067R7C0   A0A182PPL4   W5JBW8   A0A2A3EMV7   E9IIM4   E2A1E1   A0A182NUG8   A0A0J7L688   A0A084W849   A0A182JDU2   A0A182QYT6   A0A195DP96   A0A087ZSD7   A0A195EZI1   A0A3L8E4G3   A0A195BID6   A0A182YQY2   A0A2J7R0N6   A0A158P3E5   A0A195CD70   A0A1Y1L0K3   E2C3L2   A0A2M4CN73   A0A182MB47   B4LMH6   A0A154P9W1   B4J759   B4KSK7   A0A1J1INW7   A0A232FGH1   A0A0L7RCV0   B4P737   A0A1I8MXN6   A0A0A1XB12   A0A1W4VZ34   A0A0M4E5P9   B3NR63   A1Z9N6   A0A1A9WIB3   A0A1B0AM45   A0A1A9XPR1   A0A1A9ZPC2   A0A1A9V7P4   A0A1B0GC25   A0A0M9A817   B4MJM4   B0WCT3   B3MDZ0   A0A026W3Z2   A0A3B0JMW2   B4QFF4   A0A0J9RCL8   A0A182TL04   K7J6D6   A0A0L0CB48   A0A0R3NVA5   Q28X54   A0A0K8W2Z1   A0A224XH39   A0A1W4XAP3   T1PHM6   W8AUG0   A0A151WYU6   T1IE03   A0A310SIP9   A0A182SZ20   E0VA95   Q7Q417   A0A1I8QCQ5   B4H518   A0A0P6HIA9   B4HRA7   A0A164YBP7   A0A0P5GME1   A0A0P6CIU7   A0A0P5UC61   A0A0P5SQ96   F4W4K3   A0A2S2R5K6   A0A2H8TU71   A0A0P5VL85  

Pubmed

26354079    18362917    19820115    17510324    20966253    12364791    + More
26483478    24845553    20920257    23761445    21282665    20798317    24438588    30249741    25244985    21347285    28004739    17994087    28648823    17550304    25315136    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    19171940    26109357    26109356    24508170    22936249    20075255    26108605    15632085    24495485    20566863    21719571   

EMBL

ODYU01010707    SOQ55987.1    KQ459593    KPI96732.1    KQ460940    KPJ10635.1    + More
KQ971351    EFA07490.2    CH477269    EAT45387.2    AAAB01008964    APCN01002465    JXUM01060201    JXUM01060202    JXUM01060203    JXUM01060204    JXUM01060205    JXUM01060206    JXUM01060207    JXUM01060208    JXUM01060209    KQ562092    KXJ76711.1    KK852657    KDR19221.1    ADMH02001944    ETN60390.1    KZ288204    PBC33143.1    GL763494    EFZ19579.1    GL435760    EFN72767.1    LBMM01000515    KMQ98161.1    ATLV01021362    KE525317    KFB46393.1    AXCN02000760    KQ980713    KYN14309.1    KQ981905    KYN33536.1    QOIP01000001    RLU27119.1    KQ976467    KYM84132.1    NEVH01008227    PNF34397.1    ADTU01007718    KQ977935    KYM98660.1    GEZM01070752    JAV66301.1    GL452320    EFN77550.1    GGFL01002547    MBW66725.1    AXCM01012047    CH940648    EDW62071.2    KQ434853    KZC08623.1    CH916367    EDW02077.1    CH933808    EDW09512.2    CVRI01000054    CRL00177.1    NNAY01000230    OXU29844.1    KQ414615    KOC68629.1    CM000158    EDW91002.2    GBXI01006156    JAD08136.1    CP012524    ALC41654.1    CH954179    EDV56052.2    AE013599    EU814872    AAF58265.2    ACI23397.1    AHN56214.1    JXJN01000330    CCAG010018974    KQ435714    KOX79145.1    CH963846    EDW72313.2    DS231890    EDS43809.1    CH902619    EDV37535.2    KK107447    EZA50723.1    OUUW01000001    SPP74656.1    CM000362    EDX07064.1    CM002911    KMY93737.1    JRES01000644    KNC29643.1    CM000071    KRT03117.1    EAL26462.3    GDHF01006838    JAI45476.1    GFTR01008534    JAW07892.1    KA648271    AFP62900.1    GAMC01016643    JAB89912.1    KQ982649    KYQ53053.1    ACPB03019348    KQ764883    OAD54292.1    DS235005    EEB10301.1    EAA12341.2    CH479210    EDW32854.1    GDIQ01019218    JAN75519.1    CH480816    EDW47836.1    LRGB01000930    KZS15088.1    GDIQ01238327    JAK13398.1    GDIP01007816    JAM95899.1    GDIP01115178    JAL88536.1    GDIP01141922    JAL61792.1    GL887532    EGI70898.1    GGMS01016031    MBY85234.1    GFXV01005556    MBW17361.1    GDIP01098470    JAM05245.1   

Proteomes

UP000053268    UP000053240    UP000075881    UP000075900    UP000007266    UP000008820    + More
UP000075882    UP000075920    UP000076407    UP000075903    UP000075840    UP000069940    UP000249989    UP000069272    UP000027135    UP000075885    UP000000673    UP000242457    UP000000311    UP000075884    UP000036403    UP000030765    UP000075880    UP000075886    UP000078492    UP000005203    UP000078541    UP000279307    UP000078540    UP000076408    UP000235965    UP000005205    UP000078542    UP000008237    UP000075883    UP000008792    UP000076502    UP000001070    UP000009192    UP000183832    UP000215335    UP000053825    UP000002282    UP000095301    UP000192221    UP000092553    UP000008711    UP000000803    UP000091820    UP000092460    UP000092443    UP000092445    UP000078200    UP000092444    UP000053105    UP000007798    UP000002320    UP000007801    UP000053097    UP000268350    UP000000304    UP000075902    UP000002358    UP000037069    UP000001819    UP000192223    UP000075809    UP000015103    UP000075901    UP000009046    UP000007062    UP000095300    UP000008744    UP000001292    UP000076858    UP000007755   

PRIDE

A1Z9N6   

Pfam

PF13306   LRR_5        + More
PF13855   LRR_8
PF13516   LRR_6
PF00560   LRR_1
PF12799   LRR_4

Interpro

IPR032675   LRR_dom_sf        + More
IPR026906   LRR_5       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR000483   Cys-rich_flank_reg_C       
IPR025875   Leu-rich_rpt_4       
IPR017441   Protein_kinase_ATP_BS       
IPR003961   FN3_dom       
IPR001507   ZP_dom       

Gene 3D

3.80.10.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A2H1WSK0   A0A194PTT8   A0A0N1I7S4   A0A182JPP1   A0A182RCS2   D6WRC5   + More
Q17FN7   A0A182L1D1   A0A182W701   A0A1S4GY69   A0A182WTZ7   A0A182VPG8   A0A182HUL3   A0A182GFS2   A0A182F4X7   A0A067R7C0   A0A182PPL4   W5JBW8   A0A2A3EMV7   E9IIM4   E2A1E1   A0A182NUG8   A0A0J7L688   A0A084W849   A0A182JDU2   A0A182QYT6   A0A195DP96   A0A087ZSD7   A0A195EZI1   A0A3L8E4G3   A0A195BID6   A0A182YQY2   A0A2J7R0N6   A0A158P3E5   A0A195CD70   A0A1Y1L0K3   E2C3L2   A0A2M4CN73   A0A182MB47   B4LMH6   A0A154P9W1   B4J759   B4KSK7   A0A1J1INW7   A0A232FGH1   A0A0L7RCV0   B4P737   A0A1I8MXN6   A0A0A1XB12   A0A1W4VZ34   A0A0M4E5P9   B3NR63   A1Z9N6   A0A1A9WIB3   A0A1B0AM45   A0A1A9XPR1   A0A1A9ZPC2   A0A1A9V7P4   A0A1B0GC25   A0A0M9A817   B4MJM4   B0WCT3   B3MDZ0   A0A026W3Z2   A0A3B0JMW2   B4QFF4   A0A0J9RCL8   A0A182TL04   K7J6D6   A0A0L0CB48   A0A0R3NVA5   Q28X54   A0A0K8W2Z1   A0A224XH39   A0A1W4XAP3   T1PHM6   W8AUG0   A0A151WYU6   T1IE03   A0A310SIP9   A0A182SZ20   E0VA95   Q7Q417   A0A1I8QCQ5   B4H518   A0A0P6HIA9   B4HRA7   A0A164YBP7   A0A0P5GME1   A0A0P6CIU7   A0A0P5UC61   A0A0P5SQ96   F4W4K3   A0A2S2R5K6   A0A2H8TU71   A0A0P5VL85  

PDB

6GFF     E-value=1.59148e-24,     Score=284

KEGG

101745608    no KO assigned | (RefSeq) chaoptin

GO

GO:0016021   GO:0005524   GO:0008045   GO:0035159   GO:0035151   GO:0007424   GO:0004721   GO:0005515   GO:0008237   GO:0008241   GO:0016020   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887  

SignalP

Position:   1 - 18,         Likelihood:  0.993133

 

 

Length:

1117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

20.05764

Exp number, first 60 AAs:

1.44386

Total prob of N-in:

0.13088

outside

1  -  1117

 

 

Pi

213.950348

Theta

159.884124

Tajima's D

1.231795

CLR

0.435486

CSRT

0.71916404179791

Interpretation

Uncertain