Silkworm Genome Informatics Database

Gene

KWMTBOMO00706

Pre Gene Modal

BGIBMGA003270

Annotation

Peritrophin_type-A_domain_protein_3_[Operophtera_brumata]

Location

Bomo_Chr2(-):849114-851054 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.128

CDS

ATGACCCCGTCTGGACGAGCCGTCACGTACAGATACAGTTTTATTTGTCCATCCGAAACTGTGTTCAATCAGGAAGTTCTAACTTGCACCAGACCCAGAGACGCGATCGAATGCGAGGATTCTGTGTTATATTACGATCTAAACGAGGAAATAGGGAAGGTGCCGAACAAAACTGAAGAGCAGCCGCCTGTCAACGCCCAACAACCAGCGAAAAGCAGCAGTCAACAGAAGGAAACCGAAACCTTACCTGCTACCAACCAGAGGAGGACACCGAACAAACGGAAACAGAGCCTGATCATTGAAAGCCTCATGAAAGAGGTCGTCAACGATGACTTGAGACAGAAGCTAATTGGATTCGCTGAGCAGCACACTGATGATATACCAGATAGTCCAGAAATACCTGAGGAACTCGGGCTTGAGGATGGAGCAGCGGTTTCTGATGAAGAAGCCGAGGGGCGGATAGCTTTGGAGCGACGAGTGGGCAGGAAACTGGACCGAGGCAGTTTCAGGTTTAGGGCTGACGCTTGA

Protein

MTPSGRAVTYRYSFICPSETVFNQEVLTCTRPRDAIECEDSVLYYDLNEEIGKVPNKTEEQPPVNAQQPAKSSSQQKETETLPATNQRRTPNKRKQSLIIESLMKEVVNDDLRQKLIGFAEQHTDDIPDSPEIPEELGLEDGAAVSDEEAEGRIALERRVGRKLDRGSFRFRADA

Uniprot

H9J183 A0A0L7L6Y7 A0A1E1WEP1 A0A2A4J555 A0A2W1BBZ1 D5KU18 + More
A0A212EPM8

Pubmed

19121390 26227816 28756777 20619269 22118469

EMBL

BABH01031441 BABH01031442 JTDY01002622 KOB71076.1 GDQN01005667 JAT85387.1 + More
NWSH01003337 PCG66522.1 KZ150450 PZC70827.1 GU596432 ADE06398.1 AGBW02013435 OWR43443.1

Proteomes

UP000005204 UP000037510 UP000218220 UP000007151

PRIDE

H9J183

Pfam

PF01607 CBM_14

Interpro

IPR002557 Chitin-bd_dom + More
IPR036508 Chitin-bd_dom_sf

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

H9J183 A0A0L7L6Y7 A0A1E1WEP1 A0A2A4J555 A0A2W1BBZ1 D5KU18 + More
A0A212EPM8

KEGG

101740538 no KO assigned | (RefSeq) uncharacterized LOC101740538

GO

GO:0008061 GO:0005576 GO:0006030 GO:0003824 GO:0005667 GO:0005737 GO:0004505 GO:0006559 GO:0004887 GO:0016021

Length:

175

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00107

Exp number, first 60 AAs:

0.00107

Total prob of N-in:

0.20406

outside

1 - 175

Pi

263.957118

Theta

159.446279

Tajima's D

2.177362

CLR

0

CSRT

0.912704364781761

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics