Gene

KWMTBOMO00700

Pre Gene Modal

BGIBMGA003273

Annotation

PREDICTED:_zinc_finger_CCCH_domain-containing_protein_13_[Bombyx_mori]

Location

Bomo_Chr2(-):727856-737775      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.6

CDS

ATGAAGAGGTCTCGGCACAGATGGCTGGGATTCACCATCTTCGTTTGTCTCCTAGCTATCTTAGCGTCGGAGCTACCAAATACTGCAGCATTGAAGGCCACATCCCTGATCTTCTCGAAGACCAGCACGACAACCGCGGCACCCGAGGAAGAGCCATCAGGACCTGAAGATGGAGCAGAGACAGAAACAACGGCGGATGGTGGCGAAGCACCAACGAACTCGACCAGGAAACTATCGGGCATCCCACAGATAGACTACTTACTTGACCCGAACCTTCCCCGGGAATTGAACGGTTATAACCTCTCGGAGTATCCGTTCTACGAGGCCGTGCCTCCCCCGGAGACCATGGACTTCAAGTGTGACGGACTGCACGACGGGTTTTACGCGTCAGTACCACACAAATGCCAGGTGTACCATCACTGTTTGTTTGGTACCCGGTACGACTTCCTCTGCGCGAACTACACAGCTTTCGATCAGAAGACGTTCATCTGCCACTTCGTCTCCGAAGTAGATTGCAAGAACTCCCCAAACTATTTTAACAGGTAA

Protein

MKRSRHRWLGFTIFVCLLAILASELPNTAALKATSLIFSKTSTTTAAPEEEPSGPEDGAETETTADGGEAPTNSTRKLSGIPQIDYLLDPNLPRELNGYNLSEYPFYEAVPPPETMDFKCDGLHDGFYASVPHKCQVYHHCLFGTRYDFLCANYTAFDQKTFICHFVSEVDCKNSPNYFNR

Uniprot

H9J186   B2DBM9   A0A194PTS3   A0A2W1C1R8   A0A212FF35   A0A2A4JEI7   + More
A0A0N1I5Y8   A0A212F1Q8   A0A222NTA1   W8AVV8   D1MAI2   A0A0C9R9Y8   A0A1Y1K426   A0A2S1ZS23   A0A034VLA4   A0A0A1WME2   A0A034VKI8   A0A0A1XEN3   A0A0K8U4S8   A0A0A1X8R4   A0A0K8W1S4   A0A0K8UT69   A0A336LKE7   A0A1A9X0H1   A0A1A9ZMJ6   A0A1B0G3Y4   A0A1A9VN29   A0A1A9XIK8   A0A1B0AQC4   B4KWY3   A0A0R3P2I4   B4LFG9   A0A3B0JYM2   Q29FD4   A0A0R1DWQ0   B4IWS0   A0A0Q9WTY6   A0A3B0KMW2   A0A2M4BJD6   A0A2M4BJL6   A0A0M4EJV5   B4PCT5   A0A2M4BJX7   A0A0L0CEW3   A0A1W4VNL4   A0A182J670   B4H1H4   A0A182WQK8  

Pubmed

19121390    18712529    26354079    28756777    22118469    28368027    + More
24495485    18362917    20144715    19820115    28004739    29712872    25348373    25830018    17994087    15632085    18057021    23185243    17550304    26108605   

EMBL

BABH01031450    AB264714    BAG30788.1    KQ459593    KPI96717.1    KZ149912    + More
PZC78063.1    AGBW02008858    OWR52359.1    NWSH01001868    PCG69850.1    KQ460940    KPJ10626.1    AGBW02010834    OWR47666.1    KX503044    ASQ42720.1    GAMC01013555    JAB93000.1    GU128090    KQ971354    ACY95473.1    EFA06943.1    GBYB01013224    JAG82991.1    GEZM01098949    GEZM01098948    JAV53617.1    MF942739    AWK28262.1    GAKP01016634    JAC42318.1    GBXI01014265    JAD00027.1    GAKP01016633    GAKP01016632    JAC42320.1    GBXI01005339    JAD08953.1    GDHF01030999    JAI21315.1    GBXI01006598    JAD07694.1    GDHF01007539    JAI44775.1    GDHF01024654    GDHF01022606    GDHF01010371    GDHF01003234    JAI27660.1    JAI29708.1    JAI41943.1    JAI49080.1    UFQS01000004    UFQT01000004    SSW96824.1    SSX17211.1    CCAG010017308    JXJN01001785    CH933809    EDW18604.2    CH379067    KRT07402.1    CH940647    EDW69267.2    KRF84287.1    OUUW01000012    SPP87177.1    EAL31321.2    KRT07401.1    CM000159    KRK01429.1    CH916366    EDV96296.1    KRF84286.1    SPP87176.1    GGFJ01004045    MBW53186.1    GGFJ01004032    MBW53173.1    CP012525    ALC43372.1    EDW93839.1    GGFJ01004142    MBW53283.1    JRES01000493    KNC30790.1    CH479202    EDW30151.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000053240    UP000007266    + More
UP000091820    UP000092445    UP000092444    UP000078200    UP000092443    UP000092460    UP000009192    UP000001819    UP000008792    UP000268350    UP000002282    UP000001070    UP000092553    UP000037069    UP000192221    UP000075880    UP000008744    UP000075920   

PRIDE

H9J186   

Pfam

PF01607   CBM_14

Interpro

IPR002557   Chitin-bd_dom        + More
IPR036508   Chitin-bd_dom_sf       

SUPFAM

SSF57625   SSF57625       

ProteinModelPortal

H9J186   B2DBM9   A0A194PTS3   A0A2W1C1R8   A0A212FF35   A0A2A4JEI7   + More
A0A0N1I5Y8   A0A212F1Q8   A0A222NTA1   W8AVV8   D1MAI2   A0A0C9R9Y8   A0A1Y1K426   A0A2S1ZS23   A0A034VLA4   A0A0A1WME2   A0A034VKI8   A0A0A1XEN3   A0A0K8U4S8   A0A0A1X8R4   A0A0K8W1S4   A0A0K8UT69   A0A336LKE7   A0A1A9X0H1   A0A1A9ZMJ6   A0A1B0G3Y4   A0A1A9VN29   A0A1A9XIK8   A0A1B0AQC4   B4KWY3   A0A0R3P2I4   B4LFG9   A0A3B0JYM2   Q29FD4   A0A0R1DWQ0   B4IWS0   A0A0Q9WTY6   A0A3B0KMW2   A0A2M4BJD6   A0A2M4BJL6   A0A0M4EJV5   B4PCT5   A0A2M4BJX7   A0A0L0CEW3   A0A1W4VNL4   A0A182J670   B4H1H4   A0A182WQK8  

PDB

6G9E     E-value=0.00804819,     Score=88

KEGG

101740962    no KO assigned | (RefSeq) zinc finger CCCH domain-containing protein 13

GO

GO:0008061   GO:0005576   GO:0006030   GO:0004386   GO:0003824   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887   GO:0016021  

SignalP

Position:   1 - 22,         Likelihood:  0.952823

 

 

Length:

181

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.47093

Exp number, first 60 AAs:

20.46711

Total prob of N-in:

0.95981

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  181

 

 

Pi

251.904545

Theta

140.615621

Tajima's D

3.090861

CLR

0.164641

CSRT

0.982700864956752

Interpretation

Uncertain