Silkworm Genome Informatics Database

Gene

KWMTBOMO00699

Pre Gene Modal

BGIBMGA003273

Annotation

PREDICTED:_zinc_finger_CCCH_domain-containing_protein_13_[Bombyx_mori]

Location

Bomo_Chr2(-):722540-726395 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.545

CDS

ATGATGACGACGATCGCAGACCTGCATATCGAGGCGGGAAGGGATGGGCCAAACCGTAACAGAGATGAATATAGGCCAAGAGACTTAGTAGACGAAGACACGAGGTCTACTGAAGACAAAGTGCTAAATGAGGGAAATTCAAGAGATGAAATAATCAAGTCTAGAGACGAAACCAGTCCAAGAGATGAAATAAGACCAAGAGACGAAATTCGCCCAAGAGATGAGATAAGACCCAGAGATGAAATTCGGTCAAGAGATGAGATAAGACCCAGAGATGAAATTCGACCAAGAGATGAGGCAAGACCTCGTGATGAAATTCGGCCAAGAGATGAGATAAGACCCAGAGATGAAATTCGGCCAAGAGATGAGACAAGACCCAGAGATGAAATTCGACCTAGAGATGAACCCAGATCTCAGGTCAGACCTAGGCCACTTAGAGACGAAACTCCAGAGAAAAATAGAGAGAGGACTCGGGATGATAGATATCAATCCGAAGGCAGACGCTATAGAGATGAACGACCATACAGAAATAGAGATGACCGCCCCTACAAAGACGAAAAAGTTCACGAAGAGAAAAGAGAAATACCTACAGCACCAGAAGGTCAAGCTCTAGTTAAGCCCAATGGCCACGGTTTGTTCAGCCAGCCGAGGGCCCCACCCAAAATAAAAAGACCAGTCCCTTTAAGTGAAAAAGGAAAATACGAATATGTGACGGTTACAACCACGAAAGTACCTCCGAGGGCTGATGACGATGATTACTATGATTATGAAGAAGAAGAACCGAGAAGACCGTCTTCTTCCGGAAAGACCAGTACGGTACAACGTCCTAGACCGGAACCAGTTGAAAAAGAGAAATTCAAACCTACCAGACCTCAAACTGTAAACAAGCCAAGAAAGACGAAAAGACCAGAAGAATATGATGACGATTATTATTACGAACCTACTGGGAAATCTCAGAGACTATCCAATTCTAGAGAAAAAGAGAGACCCAGGTCTAAGCTCACCGATGACTATTATTATGACTACGATGACAAGAGTAAGAATAACAGACGCGAAAGAGAAGAGACTGAGACGAAAGTCAAAGAAGTTAGACCTACGGTAAAAGTTATCAAACGTCCTTTTTTACCGTCTAGGGGTGGTAGTCCGTACCTGCCGCGAGGGTTGCAGCCCGTCGCCGGCAGGGATCTGACAGCTCCTTTAAACACCACCCCTAAACCTACGACTACTACTTCCACACCTATCCCCACAACTTCTAGAACAACCACTCCTGAACCCACTACCACGCTTAAAACTACAACAACCCCAGCCAAATCCACGACCACTACAACCAAATATACAACTTCCGTGACCACGGAGAGAGTACTCCCTCAAGAGTTAAAAGCTCCAGAAGAAGAATACGAGTATTACGACGAGGAGGACGTCGAATACGACAAGAAAAGAGAAACCACAACCCAAGTGACCAGACTGAGGACTTCGAAGCCCACAACCACAACGGAACCGACGACACCAGATCAAAAAGCCAAACACCTAGCCACAAAGGTTCTGAGAGTGTACAACGACAATTACGAAGCCATCAGGGGCAAATTAGAGTCGACATTGGCACCGGGAGATTACATAAAACCGTACTTAGCAACCACTGCGCCCTACGAGGATCCCAAGCCGAAGATTAAGGCCGAAATATCGAAGCCTTACACGGCCACAGGGAAACCACCGCTCCTCCCAGAAAACATATCTATAAAACAAAATCTGGCCGACTCCTTGGAGAACGACTATGACATTCGGTATAATGAGGCCCTTTCCCCAGCTTTGCCTCTAAACAGAATACCAAGTGGCTTTGTCGTGACCCCGGAGAGAGACTACACATTTTCCCGGTTCAGAAACTACCAGGAGCCTCAGTTTGCGGCATCAGAATTGAAGAACTATCAGTTGAGGAGCAGACCGCATGTTAGTATAAGAACTCCTGCGTCATATTACATCCATCCTCAGAGATTTCAAGATGACGACCGAACCCGGTACCCCAGGCAACTCTACAGGATATTAGACCAGCTATTCTAA

Protein

MMTTIADLHIEAGRDGPNRNRDEYRPRDLVDEDTRSTEDKVLNEGNSRDEIIKSRDETSPRDEIRPRDEIRPRDEIRPRDEIRSRDEIRPRDEIRPRDEARPRDEIRPRDEIRPRDEIRPRDETRPRDEIRPRDEPRSQVRPRPLRDETPEKNRERTRDDRYQSEGRRYRDERPYRNRDDRPYKDEKVHEEKREIPTAPEGQALVKPNGHGLFSQPRAPPKIKRPVPLSEKGKYEYVTVTTTKVPPRADDDDYYDYEEEEPRRPSSSGKTSTVQRPRPEPVEKEKFKPTRPQTVNKPRKTKRPEEYDDDYYYEPTGKSQRLSNSREKERPRSKLTDDYYYDYDDKSKNNRREREETETKVKEVRPTVKVIKRPFLPSRGGSPYLPRGLQPVAGRDLTAPLNTTPKPTTTTSTPIPTTSRTTTPEPTTTLKTTTTPAKSTTTTTKYTTSVTTERVLPQELKAPEEEYEYYDEEDVEYDKKRETTTQVTRLRTSKPTTTTEPTTPDQKAKHLATKVLRVYNDNYEAIRGKLESTLAPGDYIKPYLATTAPYEDPKPKIKAEISKPYTATGKPPLLPENISIKQNLADSLENDYDIRYNEALSPALPLNRIPSGFVVTPERDYTFSRFRNYQEPQFAASELKNYQLRSRPHVSIRTPASYYIHPQRFQDDDRTRYPRQLYRILDQLF

Uniprot

H9J186

Pubmed

19121390

EMBL

BABH01031450

Proteomes

UP000005204

PRIDE

H9J186

Pfam

PF01607 CBM_14

Interpro

IPR002557 Chitin-bd_dom + More
IPR036508 Chitin-bd_dom_sf

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

H9J186

KEGG

101740962 no KO assigned | (RefSeq) zinc finger CCCH domain-containing protein 13

GO

GO:0008061 GO:0005576 GO:0006030

Length:

684

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00025

outside

1 - 684

Pi

234.339071

Theta

195.111018

Tajima's D

0.955102

CLR

0.015165

CSRT

0.651867406629668

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics