SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00695
Pre Gene Modal
BGIBMGA003223
Annotation
PREDICTED:_protein_FAM214A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.433
 

Sequence

CDS
ATGCACAGTTGCGAGACTCTGCCAGCCCAGCCGGCGTCGGGACCGAACCTGCTTCTGCAGCTCGGACGTCTCATCATCAGAGCTAGAAGCACCAGCCCCGCCTCCCGCGCCCCCGCTGCCACCCGTGACCGTCTGCTACACGCTAAACTGCTCGCTGCGAAGCCTTCTACCTCTACACAGGTACAAACACAGCCGAAACCAGAGACAGACAAGCCCAAAAGGAATGTAGAGGCCCAGCTCAGTAGTCACGTCCACGCCCTATGGAACGAACAGATACCGGTTTGCATCGAGGTACTCCTGGCTCCAGACTGCCGGGAATGCTTCATGTCACTAAATCGAGATGACGAAGAAGCCTCGTACAATAAGCTGCACTCACAGCCCAGGGGTTTGCTGCTCGAAAGGTGGACAATGCAAGCGCTTATCAACAAAAATCACGAGTCTCCAACTTTCACGACGTCGCAGTGGCTGCTCAACGCGATCCGATCACAGCTGCACTTCTCCCAGCTCGGGGCGTGGTTGGCCCGGCTCAAGGAGACGGGAGCCGATGATAATCCCACTGAACGAAGGAGAAAGCTCAGCCGCGAAAAGTGCAATTACAAAAAGCTCGAATCGAACTGCGACGTGGAGGACCTCCCCGACGAACAGCAGAGGAAACTGAACGTCGTCTACTCCGTTAAAATACCTGGCGAGAATTACAACACGACCGAGTTCTCTAAGCCCCCTACAGACCACCATTTCCCCGTGACCGACATCGGTAACAACGTCTACTTGAAAGTAGTACTCGAGAGCCTCCCCAGGATCGAAGATATACCAAACGTCAAGTGTACCTGCCAAAAACGACAGCTCAACATAGAAATCCCCCAGAATCTGAACGAAGATTTGGTCGGGAAACTGAATGATCTCAACTTAGGCTCGAAATGCGATGCAGCCAACGTCAAGAGACCGACCGCTTCGCACCAGAGCCAAAACGAATACGTATTTATAGAAAAGAATGTCTTAGATGATAGAATGCTGACTCCGTGCAGCGAAAACGGAAAACACAAGTGCAGTTGTGATGATGAACTAGACGAGAAAGAGAAGACCAAGAGATTAGACGAGAGGAGACTGAAGGAGATAGCCAAATGCAAAAGGCGGTTGAGGAAAGAGAGCAGAACCAAGAAACAAGACGAGGAGAAGAACAGAGAGACCACGTCGATACCGATACTACAGGCCGCCAGATTCGACAGGTTCAGAGCTATAGGATGCTACAGGAATCAGACGTACCTGACCTTGCCAGCCAGCAGGATTGAGACGAGATCTCCCTTCGCGGAGACCGATTGCGTGCAGATCGAAGTCAAGAAGACCAGTACGGTTTCCACGCAGACCGACGAGCCCTTCTGCCAGTGCGGCACGATGGTGAGCCTGAAGTGCGAGGGTTGCCGTCTCGTGCGCTCAGAAGGGACCTACAACCTGGCCGTCTACCAAGACGAGAACAGCAAGAAGCACAAATGTGATGTTAATTGTGATAGTATAATTAGAAGACCGAAGCTGCGGAGGCTGCTGCCGGTCACGGACAGGATCGAGGAGGTGATAACGGACAGGCAGCGGAAGGACATCGCGGAATTGAACCTGAACAAGGACGATACGGTGTTCTGTAGCCCGCGGGACAAGAGGCAGAAGACGTATTCGGTCAGCGACGATGGGTTCGTTCTTTACGAGAGGTGTGAGTACGGGACCATCGACCGGTGTGAGGGGGAGGCGGGGGCGGAGGGGGTGGCAGGGGGCTCCCCCGTCCCGAGCCCGTCTGACGTCGACAAGTTCAAGTGGCGCCTGGACTCGGCCGCGTCTATGGTGTTCCACACGAAGACCGGCCTGCCGCTCACCTCCAGTCCGGCGCCGCTCAGAAGGGGAACCAACTGCTTCGACTTCGACGACACGATTAATGGTGTTTCCGGAATTAAAAGTGCTCTGTTCCACCGCATCGCGCCGCGCTCGCCGACCCCCCCGGGCACCGCCTCCCCCCCGCCCCGTCCACTCCCCCCCACTCCCCCCGCCCGAACCCCGGGCGCGGCCCCGGCCAAGCTCAGGATCGGACCCAGCCGGGGACTCTTGGGCAGCTTCGAGGAGTCGGCTCTGAAGGGTCGACTGGAGCCCGTCGCGACCGTCCAGGGTTTCACCGCCGAGCTGGGCGCGTCCGGGTCGTGGTGTCCGCCGCACCGGAGGCTGCCCGTCACCGTGTTCTTCTACGCGCCTGGAGGAACCAACGCTCCTTATATGGGTCACATTAACCTAGGTCCAAGCGGCTACCGCATACCTCACTCGGGGACCATCCAGGTCTCCCTGTTTAACCCTCACGGGACCCTCGTGAAAATGTTCGTCGTGCTATACGAGCTGAGCGGGATGCCCCCTTCAGCGAGGACCTTCCTCCGGCAGAGGACACTGTACATGCCTGCCGGGGCGGAGCCCCCGCGCACCAGCATGCTCTACAAGTGGCTCCGGTATCTCATACATCTCAGGTTCATGACCTCAAAATCCGGAAAGCTGTATTTGCACACGGACATCCGGATACTCGTGTCAAGGAAGGCGGACGTTGACACGGCGACTGTACATTCCATCTTCAGACCGATCTCGAACTCGAATAGATCTCAGACGTCCAGCCGGAGCGCCGGACCGGTGCGCGGGGAGCCGGACCGGGGCCCGAACCGTGTTTTCGGCGGTTGTGGGGACCCCGGGGGGGCCCGGTCCGGCGCGGACCCCGGTGGGGCGCGTAGGGGGGCGCGAGAGCTCGGCTACGAGAACCACAATGGGGTCGCGTTCGAACTACGCAGTTTCACGTACGCCCCTGACAACCCCAGATACTCTCCTCGCTGA
Protein
MHSCETLPAQPASGPNLLLQLGRLIIRARSTSPASRAPAATRDRLLHAKLLAAKPSTSTQVQTQPKPETDKPKRNVEAQLSSHVHALWNEQIPVCIEVLLAPDCRECFMSLNRDDEEASYNKLHSQPRGLLLERWTMQALINKNHESPTFTTSQWLLNAIRSQLHFSQLGAWLARLKETGADDNPTERRRKLSREKCNYKKLESNCDVEDLPDEQQRKLNVVYSVKIPGENYNTTEFSKPPTDHHFPVTDIGNNVYLKVVLESLPRIEDIPNVKCTCQKRQLNIEIPQNLNEDLVGKLNDLNLGSKCDAANVKRPTASHQSQNEYVFIEKNVLDDRMLTPCSENGKHKCSCDDELDEKEKTKRLDERRLKEIAKCKRRLRKESRTKKQDEEKNRETTSIPILQAARFDRFRAIGCYRNQTYLTLPASRIETRSPFAETDCVQIEVKKTSTVSTQTDEPFCQCGTMVSLKCEGCRLVRSEGTYNLAVYQDENSKKHKCDVNCDSIIRRPKLRRLLPVTDRIEEVITDRQRKDIAELNLNKDDTVFCSPRDKRQKTYSVSDDGFVLYERCEYGTIDRCEGEAGAEGVAGGSPVPSPSDVDKFKWRLDSAASMVFHTKTGLPLTSSPAPLRRGTNCFDFDDTINGVSGIKSALFHRIAPRSPTPPGTASPPPRPLPPTPPARTPGAAPAKLRIGPSRGLLGSFEESALKGRLEPVATVQGFTAELGASGSWCPPHRRLPVTVFFYAPGGTNAPYMGHINLGPSGYRIPHSGTIQVSLFNPHGTLVKMFVVLYELSGMPPSARTFLRQRTLYMPAGAEPPRTSMLYKWLRYLIHLRFMTSKSGKLYLHTDIRILVSRKADVDTATVHSIFRPISNSNRSQTSSRSAGPVRGEPDRGPNRVFGGCGDPGGARSGADPGGARRGARELGYENHNGVAFELRSFTYAPDNPRYSPR

Summary

Pfam
PF13889   Chromosome_seg        + More
PF13915   DUF4210
Interpro
IPR033473   FAM214/SPAC3H8.04_C        + More
IPR025261   DUF4210       

Ontologies

GO

Topology

Length:
949
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01668
Exp number, first 60 AAs:
0.0009
Total prob of N-in:
0.00006
outside
1  -  949
 
 

Population Genetic Test Statistics

Pi
217.291715
Theta
165.149083
Tajima's D
0.783766
CLR
1.385833
CSRT
0.60041997900105
Interpretation
Uncertain
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