Silkworm Genome Informatics Database

Gene

KWMTBOMO00688 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003278

Annotation

YEATS_domain-containing_protein_2_[Papilio_xuthus]

Location

Bomo_Chr2(-):536437-552215 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.827

CDS

ATGGAGAGTAACGAGGAATATCACGACCCGGATTACCCGGAAGTTCCTGTTAGTGTCAAGGAGGAACCTCCGTGTGTCGCTCAGGAAGAGAAAGTTGAAAAAATCAAATCTATAATACGGCGCGAATTTCAGAATGAGCTGGAGGCAAGACAAAGCGAAGTGGTGTTGATCGATCAAAGGATGTCATCGTCACGTCGTCTCCTCCACCGCCTTCGATACGCTCTGGTGAGCAACTACTACAATGATCTCAAACTCAAATTATCGAATGCGCAGGTTGAAGATGAGATCGCTGCAATCAAAGACCCCAAGTCGAAAGCCGAGATATCAACATTGCTACGCGAGGGGCAGCGTAACATTCACCCGTCGGTCAAGAAACTGCTCGGCAAGAAGGAGGTGGACATTTCGGAGATATTCAAAAGCAGAGCCCCGAGGAATAAATCTAAGAAAGATTATTCGGCCATGCTGCAGAAACGTAACTACACCATCTCGGCAGACTCCACGAAGACGCTCCGCCCCAACATGGAGATCAAAACTGAACCCGCTGCAGAGACGAGTAGACCAAAGAAGATCCCGCGTGCTCTGAAGCCGAGCGCCACCGTGCTGACTCTGGACGAGGGAACCAGGAATCAAATGAAACATAGATATAGAATAGTTATAGGGAACACGTCCAAGTACACGCCGGCCGCGTCCCGCTCGGACCGCTCCACGCACAAGTGGCTGCTGTACGCGCGCGGCCCGCCGCAGCATCCCGACATCTCGCGCGTCGTCACCGCCGTCACCGTCAAACTGCACCACTCCTACGCGCCGCACCACACCGTGCATCTCAGTAAACCACCTTATCACATAACGAGGCGAGGCTGGGGGGAGTTCCCGGCCAAGATCGAGCTCCACTTCGCGCAGCCCCAGCTGAACCGGCCCGCGCTCGTGCAGCACACCATCAAGCTGGACACCGACTGCACGGGCCTGCAGACGTTGGGTGGAGAAACATTGGTAGATGTTTGGTTATACAGCACGGAAGAAATGCTAAAATATGAATACAAAGAAGACACGCAAACCGACGAACAAAATGAGCCAACACCTGAACTAATACAACCTAAGACGGAGCCAGTAGAAGATGTGGAGTCGCAGGCAAGCTGTCAAACCGATAACTGGTTAGAGTTCTTCAGCAACGAACACAAAGACACATCCTTTGATGTTGACGAGATGATAATCAAACCAGAAAAGAAAGCTGAACTCGACATTAATTACTACGACAGTGAGCTAGTCGTGAAAACTGAGCCTCCGGAGCCTCAGACCTGGACAGATCCGTGTGAACGCCTCAACGAATTCCCCGATGAAATACTAAAGAAACCAAATCTACCGAAGAAGCGTATAGTGAAATACATGGAACCCACAACGGGGAAGATTTATTATTTAGAAATGGACAGAACGCTCGATCTCAGTAAAGTGCAGGAAATAGTGATCAATAATAAAACTGCTAAAATCAGTCCGATCAAATCAAACGGCCTGAAGAGTGTTAGAAATAGAAAACACGGTGTGTCATTATTAAAACCTAAGTTAAGTGCTAATAAAGTGAACGATTACTCTCATATACAAAACGATCATTGTTATCTGGCAACACCGCTTTGTAATGTTGCCGGTGTCAAAAAAGAACATTCGCTGTATGAGTTTTTGTGTTCGAGTATGAATAAGTTTGATTGTGTTAGGACCGCTGTAAGTTTTTTAGTGAAAAGAATTCCATTGGTGAGTGAAGACGCTCGGGATCCAGACTTTTTGAAGAACTTTCCATTTGTCGTTGATAATTATGAACGGTTTTGGAAGATGGATTTTGCTAAACGTAGGAATATTGAGTGGTCACGGGCGAAACTAATCAACAAAATATTAAGCGAGCACTTCATTAACAACGAAACAATATGGAGAACAAAGCAAATACTAATCTATTCTAGGCTGCACGGCTACTATCCCATACGCAAGGACTGCCTGAATGACAGATCAGAGACGTCAGACGATAACGAAAGGTTGACATCTGACATTAAAACGCTGTCAATCTTCGACCCGGAGTTATACAGTTGTCAGAACGAAGTCCTCAATTTGACGGGATCGGATGACGAAATCGACGTTGTAAACTGTCAGTCGCCTGTCAAAGTCAAAGTGGAGTTGCCGTCTGAAGAGGTGTTGACAGTGTTGCCAGTGGAAAACGAAGACGACAGACTGAGGTATTTTTATATTGAGAAGAAATGCGCTGATATCGGTATCGATTTACGATGTGAAGATATTGGAAACGGATATTCTTACAGCGCGGTGCACGCCGTACTGCTGTCCGCGGTCCGCAGCGTGGCCGACGAGCTACTCCGGGGCGCGCTCGCGCACAGCCTCGCCCGGACCAACACCGCCTGGCCGGGGTCGTCGCACCGCCGCGAGCGCGTGTCGTGCGGCGCCGTGGCGGCGGGCGCGGCGGCGGGCCGGCTCGCGCTGCTCACGGACGCGGCGCTGGGGGCCGCGCCCAAGGACAAACACAACTTATAA

Protein

MESNEEYHDPDYPEVPVSVKEEPPCVAQEEKVEKIKSIIRREFQNELEARQSEVVLIDQRMSSSRRLLHRLRYALVSNYYNDLKLKLSNAQVEDEIAAIKDPKSKAEISTLLREGQRNIHPSVKKLLGKKEVDISEIFKSRAPRNKSKKDYSAMLQKRNYTISADSTKTLRPNMEIKTEPAAETSRPKKIPRALKPSATVLTLDEGTRNQMKHRYRIVIGNTSKYTPAASRSDRSTHKWLLYARGPPQHPDISRVVTAVTVKLHHSYAPHHTVHLSKPPYHITRRGWGEFPAKIELHFAQPQLNRPALVQHTIKLDTDCTGLQTLGGETLVDVWLYSTEEMLKYEYKEDTQTDEQNEPTPELIQPKTEPVEDVESQASCQTDNWLEFFSNEHKDTSFDVDEMIIKPEKKAELDINYYDSELVVKTEPPEPQTWTDPCERLNEFPDEILKKPNLPKKRIVKYMEPTTGKIYYLEMDRTLDLSKVQEIVINNKTAKISPIKSNGLKSVRNRKHGVSLLKPKLSANKVNDYSHIQNDHCYLATPLCNVAGVKKEHSLYEFLCSSMNKFDCVRTAVSFLVKRIPLVSEDARDPDFLKNFPFVVDNYERFWKMDFAKRRNIEWSRAKLINKILSEHFINNETIWRTKQILIYSRLHGYYPIRKDCLNDRSETSDDNERLTSDIKTLSIFDPELYSCQNEVLNLTGSDDEIDVVNCQSPVKVKVELPSEEVLTVLPVENEDDRLRYFYIEKKCADIGIDLRCEDIGNGYSYSAVHAVLLSAVRSVADELLRGALAHSLARTNTAWPGSSHRRERVSCGAVAAGAAAGRLALLTDAALGAAPKDKHNL

Uniprot

H9J191 A0A2A4K180 A0A2H1VV84 A0A194PTF9 A0A0N1INW7 A0A2W1C1S7 + More
A0A212FI72 A0A1W4WTX3 E0VHF2 A0A1W4X4U4 B4JBB1 B4NLK5 A0A1W4VWQ1 B4NWZ7 A0A232F540 A0A3B0K0Q0

Pubmed

19121390 26354079 28756777 22118469 20566863 17994087 + More
17550304 28648823

EMBL

BABH01031464 NWSH01000277 PCG77819.1 ODYU01004645 SOQ44740.1 KQ459593 + More
KPI96706.1 KQ460940 KPJ10616.1 KZ149912 PZC78073.1 AGBW02008426 OWR53430.1 DS235169 EEB12808.1 CH916368 EDW02916.1 CH964274 EDW85244.1 CM000157 EDW88527.1 NNAY01001022 OXU25457.1 OUUW01000010 SPP86242.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000007151 UP000192223 + More
UP000009046 UP000001070 UP000007798 UP000192221 UP000002282 UP000215335 UP000268350

PRIDE

H9J191

Pfam

PF03366 YEATS

Interpro

IPR005033 YEATS + More
IPR038704 YEAST_sf

Gene 3D

2.60.40.1970

ProteinModelPortal

H9J191 A0A2A4K180 A0A2H1VV84 A0A194PTF9 A0A0N1INW7 A0A2W1C1S7 + More
A0A212FI72 A0A1W4WTX3 E0VHF2 A0A1W4X4U4 B4JBB1 B4NLK5 A0A1W4VWQ1 B4NWZ7 A0A232F540 A0A3B0K0Q0

PDB

5XNV E-value=3.73457e-27, Score=305

KEGG

101741660 no KO assigned | (RefSeq) uncharacterized LOC101741660

GO

GO:0006355 GO:0005634 GO:0005671 GO:0004402 GO:0005700 GO:0006338 GO:0005730 GO:0006508 GO:0003824 GO:0005667 GO:0005737 GO:0004505 GO:0006559 GO:0004887 GO:0016021

PANTHER

PTHR23195

Subcellular location

Nucleus

Length:

841

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04582

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00004

outside

1 - 841

Pi

243.248086

Theta

158.55051

Tajima's D

1.649894

CLR

0.182849

CSRT

0.818809059547023

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics