Gene

KWMTBOMO00680  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003216

Annotation

PREDICTED:_ATP-dependent_zinc_metalloprotease_YME1_homolog?_partial_[Papilio_xuthus]

Location

Bomo_Chr2(+):381876-390446      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.102 Mitochondrial   Reliability : 1.685

CDS

ATGACTCGTGAAAAGATTTGTTTGTTGTGTAATCCAGGGTCCCATCCCGAGAATGTACGCGGTACGAAAGCCTCCAAGTACCTGAAGCTGGTCCAGCAACTCCTCACCATAGTTCTCTTTCTTGCAATCTTTGTGAGTTTGATGGCGTCGGTCAGCGGAACTGTCTTCCGGATCCAGCTCGGGAACCAGGTGGAGGTGGACCCCGAAGATATCTCCGTTACCTTCGACGATGTCAAAGGCGCTGACGAAGCTAAACAAGAACTGCAGGAAGTGGTGGAATTCCTCAAGTCCCCCGAGAAGTTTTCAACACTGGGTGGTAAACTACCCAAGGGCGTGCTGCTCGTGGGCCCCCCCGGCACCGGCAAGACGCTACTGGCGCGGGCGGTGGCCGGCGAGGCTCGGGTACCGTTCTTCCATGCGGCGGGACCGGAGTTCGACGAGATCCTGGTGGGACAGGGGGCTCGCAGAGTCCGGGACTTGTTCAAGGCGGCCAAGGAGCGAGCGCCCTGCGTCATCTTCATAGACGAGATAGACTCGGTGGGAGCCAAGCGCACCAACAGCGTGCTGCACCCCTACGCCAACCAGACGATAAACCAGCTCCTATCAGAGATGGACGGTTTCCATCAGAACGAAGGCGTGATCGTTCTGGGCGCCACCAACAGGAGGGATGACTTAGACCAGGCCTTGCTCAGGCCAGGACGATTTGATGTTGAGGTGACGGTGCCGCTGCCGGACTACGTGGGGCGCGTGGAGCTGGCGCGGCTGTACGTGTCGCGCGTGCGGGCGCACCCCGACGTGCAGCCCGAGGAGCTGGCGCGCGCCACCACCGGCTTCACCGGCGCCGACCTCGAGAACATGGTCAACCAGGCCGCGCTCAGGGCAGCTATAGAGGGCGCCAAGACGGTCACCATGAAGCACCTGGAGGATGCCCGCGACAAGGTGCTGATGGGTCCCGAGCGCCGGGGGCGGCTCCCGGACGAGGAGGCCAACACCATCACCGCCTACCACGAGGGGGGCCATGCTGTTGTCGCTTATTTTACTAAGGACGCCCATCCGCTGCACAAAGTGACCATCATCCCGCGCGGCCCGTCGCTGGGCCACACCGCCTACATACCCGCCAAGGAGAGGTACCACGAGACGAAGCAGCAGCTCCTAGCGATGATGGACACCATGATGGGGGGGCGGGCGGCGGAAGAACTCATCTTTGGACCGGAGAAGATCACCTCAGGGGCGGCGTCGGACCTGAAGCAGGCGACGTCGCTGGCGCGGCACATGGTGCGGGAGTGGGGCATGTCGGAGCGCGTGGGCCCGCGGGCGCTGGACCCGCCGGCGGCCCCCGCGCAGCCGGCGCCCGGGCCCGCGCTGGCCGACCTGGCCGACAGCGAGGTGCGCAAACTGCTCAGCGACAGTCTGGACCGCGCCAAGCACATCCTGCGGGCGCACGCGCGCGAGCACCGCGCCCTCGCCGCCGCGCTGCTGCGCTACGAGACCCTCGACGCGGACGACATCCGGGCCCTCATGAACGGAGAGAAGACCAAACTGGAACGCGGCTCGAAGACCAAGGACCCGTCTCCTTCCCCTTCCCCCAACCCCGCGCCTCCCCTGTTGACCCCGCAGCCCGCTCCCGCCTAG

Protein

MTREKICLLCNPGSHPENVRGTKASKYLKLVQQLLTIVLFLAIFVSLMASVSGTVFRIQLGNQVEVDPEDISVTFDDVKGADEAKQELQEVVEFLKSPEKFSTLGGKLPKGVLLVGPPGTGKTLLARAVAGEARVPFFHAAGPEFDEILVGQGARRVRDLFKAAKERAPCVIFIDEIDSVGAKRTNSVLHPYANQTINQLLSEMDGFHQNEGVIVLGATNRRDDLDQALLRPGRFDVEVTVPLPDYVGRVELARLYVSRVRAHPDVQPEELARATTGFTGADLENMVNQAALRAAIEGAKTVTMKHLEDARDKVLMGPERRGRLPDEEANTITAYHEGGHAVVAYFTKDAHPLHKVTIIPRGPSLGHTAYIPAKERYHETKQQLLAMMDTMMGGRAAEELIFGPEKITSGAASDLKQATSLARHMVREWGMSERVGPRALDPPAAPAQPAPGPALADLADSEVRKLLSDSLDRAKHILRAHAREHRALAAALLRYETLDADDIRALMNGEKTKLERGSKTKDPSPSPSPNPAPPLLTPQPAPA

Similarity

Belongs to the AAA ATPase family.

Uniprot

A0A2W1BZE4   A0A194PZW0   A0A0N0PBP1   A0A212FI87   A0A0T6BGT0   A0A1Y1KJ66   + More
A0A336L6J4   A0A336MV38   S4P9Q0   A0A2M4CNW1   A0A2J7QX54   D6WSZ1   A0A2M3Z283   A0A2M4A4F9   A0A182F0T4   A0A2M4BFC5   W5JQT4   U5EXG9   A0A0L0CBP0   A0A1J1IED0   A0A1B6CDD3   A0A067R7D1   A0A0K8WGX4   A0A034W1C2   A0A1B6EUC6   A0A0A1WJP3   A0A1B6HZT6   A0A1I8NCL1   A0A182W8S8   A0A1S4G7A4   A0A1L8D8U4   A0A182RWS4   W8CBT0   A0A182PCG5   A0A0K8TL90   A0A0R1DTF1   W8BZ91   A0A1A9XPP7   A0A1B6L7H0   A0A1B0AM23   A0A182XGW8   A0A1B0GC29   A0A0Q5VQ01   A0A1B0A9I4   A0A182NP38   A0A1A9V9A5   A0A182Y6B6   A0A1A9WI89   A0A0J9RJC2   A0A0R3NW39   A0A182KCD6   B4I8D1   A0A182TFF0   A0A182HRA9   A0A0B4KFY4   A0A0A1X0G0   A0A1I8NXS4   Q16TH8   A0A1Q3FFX8   A0A1Q3FG28   A0A1Q3FG17   A0A1Q3FG56   A0A084VSV3   A0A0R1DTD2   A0A0R1DYT1   T1P7P9   A0A1W4VQ25   B4LMW9   A0A182Q066   A0A0M4EBL2   B3MEK9   A0A182JGY0   A0A0Q5VNZ9   A0A0A9VU08   A0A0J9RKC2   B4KT01   A0A182V052   A0A0Q5VVW7   A0A0K8SB95   Q28X45   N6TVD5   J3JXS3   F3YDF1   A0A0J9RIR7   Q9W1Y0   A0A3B0JGZ1   B4J768   Q7Q150   B4H508   B0W7N2   A0A0Q9WG90   A0A0R3NUW1   B4P8L8   A0A1I8NXR8   A0A182KZ18   A0A182H4G5   A0A1W4VD18   A0A0P9AGK3   A0A1W4VDC0   A0A0P8XQV5  

Pubmed

28756777    26354079    22118469    28004739    23622113    18362917    + More
19820115    20920257    23761445    26108605    24845553    25348373    25830018    25315136    17510324    24495485    26369729    17994087    17550304    25244985    22936249    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24438588    25401762    26823975    23537049    22516182    26109357    26109356    12364791    20966253    26483478   

EMBL

KZ149912    PZC78076.1    KQ459593    KPI96705.1    KQ460940    KPJ10612.1    + More
AGBW02008426    OWR53429.1    LJIG01000475    KRT86465.1    GEZM01085055    JAV60290.1    UFQS01002034    UFQT01002034    SSX13029.1    SSX32469.1    UFQT01002230    SSX32979.1    GAIX01003664    JAA88896.1    GGFL01002693    MBW66871.1    NEVH01009393    PNF33168.1    KQ971352    EFA06331.1    GGFM01001864    MBW22615.1    GGFK01002375    MBW35696.1    GGFJ01002377    MBW51518.1    ADMH02000444    ETN66461.1    GANO01002542    JAB57329.1    JRES01000644    KNC29655.1    CVRI01000048    CRK98631.1    GEDC01025841    GEDC01003047    JAS11457.1    JAS34251.1    KK852657    KDR19236.1    GDHF01001908    JAI50406.1    GAKP01009596    JAC49356.1    GECZ01028259    JAS41510.1    GBXI01015562    JAC98729.1    GECU01035975    GECU01027542    GECU01017509    GECU01002707    JAS71731.1    JAS80164.1    JAS90197.1    JAT05000.1    GFDF01011212    JAV02872.1    GAMC01004561    JAC01995.1    GDAI01002672    JAI14931.1    CM000158    KRK00425.1    GAMC01004562    JAC01994.1    GEBQ01020372    JAT19605.1    JXJN01000314    CCAG010018979    CH954179    KQS63012.1    CM002911    KMY95907.1    CM000071    KRT03136.1    CH480824    EDW56856.1    APCN01001662    AE013599    AGB93673.1    GBXI01009680    JAD04612.1    CH477649    EAT37814.1    GFDL01008589    JAV26456.1    GFDL01008550    JAV26495.1    GFDL01008560    JAV26485.1    GFDL01008512    JAV26533.1    ATLV01016141    KE525057    KFB41047.1    KRK00424.1    KRK00426.1    KA644509    AFP59138.1    CH940648    EDW62084.1    AXCN02001967    CP012524    ALC40940.1    CH902619    EDV37629.1    KQS63014.1    GBHO01043832    GDHC01002861    JAF99771.1    JAQ15768.1    KMY95909.1    CH933808    EDW09521.2    KQS63013.1    GBRD01015811    JAG50015.1    EAL26471.3    APGK01059416    KB741293    ENN70247.1    BT128044    KB632046    AEE63005.1    ERL88257.1    BT126312    AEB39673.1    AFH08226.1    KMY95908.1    AY051480    AAK92904.1    AAM71132.2    OUUW01000001    SPP74640.1    CH916367    EDW02086.1    AAAB01008980    EAA13918.4    CH479210    EDW32844.1    DS231854    EDS38067.1    KRF80436.1    KRT03135.1    EDW92235.1    JXUM01025288    JXUM01025289    KQ560717    KXJ81169.1    KPU76949.1    KPU76951.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000235965    UP000007266    UP000069272    + More
UP000000673    UP000037069    UP000183832    UP000027135    UP000095301    UP000075920    UP000075900    UP000075885    UP000002282    UP000092443    UP000092460    UP000076407    UP000092444    UP000008711    UP000092445    UP000075884    UP000078200    UP000076408    UP000091820    UP000001819    UP000075881    UP000001292    UP000075902    UP000075840    UP000000803    UP000095300    UP000008820    UP000030765    UP000192221    UP000008792    UP000075886    UP000092553    UP000007801    UP000075880    UP000009192    UP000075903    UP000019118    UP000030742    UP000268350    UP000001070    UP000007062    UP000008744    UP000002320    UP000075882    UP000069940    UP000249989   

PRIDE

F3YDF1    Q9W1Y0   

Pfam

PF01434   Peptidase_M41        + More
PF17862   AAA_lid_3
PF00004   AAA

Interpro

IPR037219   Peptidase_M41-like        + More
IPR000642   Peptidase_M41       
IPR003959   ATPase_AAA_core       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR003593   AAA+_ATPase       
IPR041569   AAA_lid_3       
IPR005936   FtsH       

SUPFAM

SSF52540   SSF52540        + More
SSF140990   SSF140990       

Gene 3D

1.20.58.760    

ProteinModelPortal

A0A2W1BZE4   A0A194PZW0   A0A0N0PBP1   A0A212FI87   A0A0T6BGT0   A0A1Y1KJ66   + More
A0A336L6J4   A0A336MV38   S4P9Q0   A0A2M4CNW1   A0A2J7QX54   D6WSZ1   A0A2M3Z283   A0A2M4A4F9   A0A182F0T4   A0A2M4BFC5   W5JQT4   U5EXG9   A0A0L0CBP0   A0A1J1IED0   A0A1B6CDD3   A0A067R7D1   A0A0K8WGX4   A0A034W1C2   A0A1B6EUC6   A0A0A1WJP3   A0A1B6HZT6   A0A1I8NCL1   A0A182W8S8   A0A1S4G7A4   A0A1L8D8U4   A0A182RWS4   W8CBT0   A0A182PCG5   A0A0K8TL90   A0A0R1DTF1   W8BZ91   A0A1A9XPP7   A0A1B6L7H0   A0A1B0AM23   A0A182XGW8   A0A1B0GC29   A0A0Q5VQ01   A0A1B0A9I4   A0A182NP38   A0A1A9V9A5   A0A182Y6B6   A0A1A9WI89   A0A0J9RJC2   A0A0R3NW39   A0A182KCD6   B4I8D1   A0A182TFF0   A0A182HRA9   A0A0B4KFY4   A0A0A1X0G0   A0A1I8NXS4   Q16TH8   A0A1Q3FFX8   A0A1Q3FG28   A0A1Q3FG17   A0A1Q3FG56   A0A084VSV3   A0A0R1DTD2   A0A0R1DYT1   T1P7P9   A0A1W4VQ25   B4LMW9   A0A182Q066   A0A0M4EBL2   B3MEK9   A0A182JGY0   A0A0Q5VNZ9   A0A0A9VU08   A0A0J9RKC2   B4KT01   A0A182V052   A0A0Q5VVW7   A0A0K8SB95   Q28X45   N6TVD5   J3JXS3   F3YDF1   A0A0J9RIR7   Q9W1Y0   A0A3B0JGZ1   B4J768   Q7Q150   B4H508   B0W7N2   A0A0Q9WG90   A0A0R3NUW1   B4P8L8   A0A1I8NXR8   A0A182KZ18   A0A182H4G5   A0A1W4VD18   A0A0P9AGK3   A0A1W4VDC0   A0A0P8XQV5  

PDB

6AZ0     E-value=1.16821e-95,     Score=894

KEGG

101742339    K08955 ATP-dependent metalloprotease [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease YME

GO

GO:0004222   GO:0016021   GO:0005524   GO:0016020   GO:0051301   GO:0005743   GO:0005739   GO:0007005   GO:0006508   GO:0004176   GO:0006515   GO:0034982   GO:0042407   GO:0008053   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887  

Length:

543

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.29171

Exp number, first 60 AAs:

22.28892

Total prob of N-in:

0.99710

POSSIBLE N-term signal

sequence

inside

1  -  33

TMhelix

34  -  56

outside

57  -  543

 

 

Pi

235.919108

Theta

139.791296

Tajima's D

1.676182

CLR

0.095917

CSRT

0.818859057047148

Interpretation

Uncertain