Silkworm Genome Informatics Database

Gene

KWMTBOMO00678

Pre Gene Modal

BGIBMGA003284

Annotation

PREDICTED:_protein_daughterless_isoform_X3_[Amyelois_transitella]

Location

Bomo_Chr2(-):253536-294315 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 4.232

CDS

ATGGCTTTGCGGCATGACACCAGCATGGACTCGAGTTTCCTCGCAGCTGACCCCCCGCCTGTCCCGGGACTCGACTACCACCAGCCCAGGACAGACCTGGCCTCCGAGTACTTTAATACCTTCAACCAAGTGTGCGAGAACTACCGAAGTGATACGGAACTGAACTTGAGGCAGACGTCAGATTCTTTGCGTTTGTCTTCGGAAATCTTGGACGGTGTCAGACCGGAGTATGTCAGTTTGGACTTTAACAATAAACTGTTCGATGCTGATAAGTTTGTGATCGGGAGAGACGAACACTCGTTTAGGTTTGATCAGCCCGACGCGTCCGCGTTGTTGAGACACAGAGCCAGGAGAAGATTGAACGATGAGCACGGGATCCCGAACCCTGTAGCGACCAGCCAGGAGAGTGGGTACGGAAGCGATGAATTCGGGCACGACTCGCCCAGCAGGTACGCGTCGCCGAAGGGGGCGGGAGCGGGAGCTTCGTACCAGGAGCCGTACTACGCGGGGGGCGGGGGCGAGTGGGCGGCAGGGTACTACCAGCCCCCACCGCCCTACCACCATGACCCCTATGCCACGTCGCCGGGTATAGCGGGCGCTGCGGTGGGCGGCGAGGCGACGGGCGGCGGCGCGGAGCTGCCACTGCCGCCCATGTCCTCCTTCAGAGCCGCAGCCCCCCACCACTCCCCCACAGACCCCATGCTCGTCGCCAAACCTCCGCTACAACCAATGTATGGGGGGGGCGCGAGTACGCCGACGGTGGTGGGCCCCGAGGGCAGCGTGTCGTCCTACTCGTCGCCGTCCACGCCCGTGCACTCCCCGCCCCCGCTGCACGCCCGCCTCTACCCCCTCAAGCACGAACACGTGCCGCACGCCGTGCCAGTCACGCAGCAGGCAGGCTGGTCGGGGCCGGGCGTGTCCTCTCCTCCCTCAGGAGCGACCCCCCTCGCGAACGGACACCCGCACGTCGCCGTCTACCCCCCTAATGTAATGGGCGCGCCCGCAGAACAGCGACAGCTCGACGAAGCCATGGTGTTCTTGCGGGAGCACTCCGACGTCGTTGGGGCGCGTATGGAGGAGCGCCTGGACGACGCCATCAACGTGCTGCGGAACCACGCCGAGGCACCCGAGCTGTACCCGCACGAGCTGCACCAGCCGCCGCCAGCGGCGCGCCTGGCCGTCGCCGCCCACCTACATGGGGAGCCGCCCGTCAAGATGGAGCGCCACGTCCTGCCCAGCACCAAAAAACGTAAAGAACCAGTGGACTCGGGGCTGGACTCGAAGCCTTCATCATCAGGATCAGCCGACCTCGCCCTCCACAAACCTCCCTCCAACAAACGGTCACGGAGATACTGCTCGTCCGCCGACGAGGACGACGTGGACCCCGACACCAAGGCGGCCCGCGAGAGGGAGCGCCGCCAGGCCAACAATGTCAGGGAGAGGATAAGAATAAGGGACATAAACGAAGCCCTGAAGGAGCTGGGCAGGATGTGTATGACGCACCTCAAGAGCGACAAGCCGCAGACCAAGCTGGGCATCCTCAACATGGCCGTCGAAGTCATCATGACGTTGGAGCAACAAGTCAGAGAACGCAATCTAAATCCTAAAGCGGCGTGCTTGAAGCGACGCGAAGAAGAAAAGGCGGAGGAGGCGCCCAAACTCCTGGCCGCCCCCCTCCAGCACTACCAGCCCATGCCCGGTATGGGACAACTACCGGGCCAACCCCCCACGGGCCCCCCGCAGCAATAG

Protein

MALRHDTSMDSSFLAADPPPVPGLDYHQPRTDLASEYFNTFNQVCENYRSDTELNLRQTSDSLRLSSEILDGVRPEYVSLDFNNKLFDADKFVIGRDEHSFRFDQPDASALLRHRARRRLNDEHGIPNPVATSQESGYGSDEFGHDSPSRYASPKGAGAGASYQEPYYAGGGGEWAAGYYQPPPPYHHDPYATSPGIAGAAVGGEATGGGAELPLPPMSSFRAAAPHHSPTDPMLVAKPPLQPMYGGGASTPTVVGPEGSVSSYSSPSTPVHSPPPLHARLYPLKHEHVPHAVPVTQQAGWSGPGVSSPPSGATPLANGHPHVAVYPPNVMGAPAEQRQLDEAMVFLREHSDVVGARMEERLDDAINVLRNHAEAPELYPHELHQPPPAARLAVAAHLHGEPPVKMERHVLPSTKKRKEPVDSGLDSKPSSSGSADLALHKPPSNKRSRRYCSSADEDDVDPDTKAARERERRQANNVRERIRIRDINEALKELGRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAEEAPKLLAAPLQHYQPMPGMGQLPGQPPTGPPQQ

Uniprot

A0A2W1BUN9

Pubmed

28756777

EMBL

KZ149912 PZC78081.1

Pfam

PF00010 HLH

Interpro

IPR036638 HLH_DNA-bd_sf + More
IPR011598 bHLH_dom

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

A0A2W1BUN9

PDB

2YPB E-value=1.78818e-16, Score=212

KEGG

101746894 K15603 transcription factor 4/12 | (RefSeq) protein daughterless

GO

GO:0046983 GO:0008270 GO:0007608 GO:0016020 GO:0005667 GO:0005737 GO:0004505 GO:0006559 GO:0004887 GO:0016021

Length:

582

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000600000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00133

outside

1 - 582

Pi

222.359623

Theta

164.605691

Tajima's D

1.695573

CLR

0.219651

CSRT

0.831158442077896

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics