Gene

KWMTBOMO00675

Pre Gene Modal

BGIBMGA003286

Annotation

PREDICTED:_neogenin_[Bombyx_mori]

Location

Bomo_Chr2(-):151974-157575      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.34 PlasmaMembrane   Reliability : 1.062

CDS

ATGAGCTCGTCACTTGGTGGAGGAGAAGAGGATCCCGGAGTGAGGTTCACGACGGAGCCAAGCGACGCAGTGGTCCTTCCCGGTGAAGATGCGTTGCTTCTCTGCGCGGCTGCTTCCAAGCTGCCCGTGCGTCTGGCGTGGCGGTACAGCGCCAGTTCCCTGCCCACCAGAGACCACGGCGTCTCTATTAGCGATAAGTCCAGGAAGCAACTCCTCAACGGCTCCCTTCTGATAGAGAGCATGACAGCGTCCTTGGCGGGCCAGTACCAGTGTGTGGCCACCGTGGACGGTATCGGTACCATCGTCTCAAGAGCCGCCACCGTGTTCTTAGCTGAGGTGCCAGTGTTGTCGGGCACCCCGCGCAGCGTGCTGTCCGCGGTGGGGGGCGTGGCGCTGCTGCCGTGCGGGATACAGGCCCCGCCGAGACTGGCCCTCAGAGTCGTGCCCGCCGCCAACACCGACAGGAGGGCGTACGGCGCCGCCAAGCTACTCAACACTCCGCCCCTCCTCAAACTCAATGTGACCTGGTTAAAGAACGGCTCCCCGGTCCGCACGGAGAGCGCCCGCGTCTCCATCACGCCCAGCGGAGCCTTGGAGATAGAGCCGCTGCGGCACCACGACGCCGCCTCCTACAGATGTCGTGTTTCTATCACACCTCATCTATATCGGGTAAGCGATGAGATAGAGCTACGCGTGAGTGCTGACACTCCCAACACGGAGGCGGCCCCCAGGTTCGTCGCGATGCCGCAATCCCTCACTGTCATGGAAGGCGGCTCCGCGACCCTGGACTGCGCCGCCATCGGGAACCCTAAACCAGAGATCATTTGGCTCAACAACGGAGTCGCTATCGACTTAAGCGACCTGGACTCGCGGCTGTACCTGGTGGGGTCGGGCTCGCTGCGGCTGCGGGCGGCGCGCGCGGGGGACGCCGGCGCCTACACGTGCCGCGCCCACAGCCGCCTCGACTCCAGCGACCACACCGCGCACCTGCACGTGCTGGTCGGTACACACGCGCCCTACATACATAAACTGTCTTATCCATGTTTATCCGTCTTTGCACCTTAA

Protein

MSSSLGGGEEDPGVRFTTEPSDAVVLPGEDALLLCAAASKLPVRLAWRYSASSLPTRDHGVSISDKSRKQLLNGSLLIESMTASLAGQYQCVATVDGIGTIVSRAATVFLAEVPVLSGTPRSVLSAVGGVALLPCGIQAPPRLALRVVPAANTDRRAYGAAKLLNTPPLLKLNVTWLKNGSPVRTESARVSITPSGALEIEPLRHHDAASYRCRVSITPHLYRVSDEIELRVSADTPNTEAAPRFVAMPQSLTVMEGGSATLDCAAIGNPKPEIIWLNNGVAIDLSDLDSRLYLVGSGSLRLRAARAGDAGAYTCRAHSRLDSSDHTAHLHVLVGTHAPYIHKLSYPCLSVFAP

Uniprot

H9J199   A0A2H1WRY9   A0A194PTN9   A0A0N1PFE0   A0A212F3D5   A0A2W1BWU2   + More
A0A2A4JUT9   A0A2A4JTN1   A0A212F1J6   A0A158P3C4   A0A195CWM6   A0A195BN55   A0A195DFJ3   F4W5X3   E2C3E0   A0A195EYT9   A0A224XGP9   A0A151XH75   A0A182KEB2   A0A182TTA5   A0A3L8DEQ7   A0A232FFG1   K7J3C6   V5I8X2   A0A1W4X9F8   A0A1W4X877   A0A087ZSG0   A0A182Y366   A0A1Y1M7T4   A0A182QE71   T1I1E7   A0A182FI15   A0A154P1U5   A0A146M2A7   A0A1B6DDS9   A0A182P0Y0   W5JMC4   A0A2A3E7S9   Q7Q623   A0A182XM71   A7UU12   A0A182M1U9   A0A0T6BEU8   A0A182R7X4   A0A182NME2   A0A0L7RCW9   A0A1J1HDZ4   A0A182WHR9   A0A310SL89   A0A147BBM2   A0A164QIC7   E2A6Y7   A0A182J115   A0A0P5UX89   A0A0P5KYM7   A0A0P6ES54   A0A0P6GET6   A0A0P5H937   A0A0P5DQP6   A0A0P5KKN1   A0A0P4Y0X2   A0A0P5NYW2   A0A0P5Q443   A0A0P5YH31   A0A0N8ECS1   A0A0P5XFH3   A0A0P5X1H7   A0A0P5UZW4   A0A0P5QT45   A0A0P5ANJ4   A0A0P5XLL3   A0A0N8D858   A0A0P5BPA1   A0A0P5S921   A0A0P5EVV4   A0A0P4WNJ2   A0A0N8B6J0   A0A0P4XSM5   A0A0P5NQE8   A0A0P5PQ66   A0A0P5TTV7   A0A0P6E2W6   A0A0N8CSI5   A0A0P5C0E8   A0A0P5J9C0   A0A0P6INE5   B7QJ27   A0A0P5RFN3   A0A0P5VXG0   A0A084WLA1   A0A0P5WMS4   A0A0P5NAK5   A0A0P5J3L4   A0A0P5J272   A0A0P6EEU7   A0A0P5SFR1   A0A0P5G0C7   A0A0P6IJI1   A0A0P6F6H1   A0A0P5C0B7  

Pubmed

19121390    26354079    22118469    28756777    21347285    21719571    + More
20798317    30249741    28648823    20075255    25244985    28004739    26823975    20920257    23761445    12364791    29652888    24438588   

EMBL

BABH01031504    ODYU01010601    SOQ55821.1    KQ459593    KPI96682.1    KQ460940    + More
KPJ10593.1    AGBW02010579    OWR48245.1    KZ149912    PZC78094.1    NWSH01000602    PCG75394.1    PCG75395.1    AGBW02010859    OWR47615.1    ADTU01007494    ADTU01007495    KQ977185    KYN05040.1    KQ976432    KYM87460.1    KQ980903    KYN11653.1    GL887695    EGI70449.1    GL452320    EFN77478.1    KQ981905    KYN33388.1    GFTR01008796    JAW07630.1    KQ982130    KYQ59759.1    QOIP01000009    RLU18925.1    NNAY01000313    OXU29293.1    GALX01003940    JAB64526.1    GEZM01041004    JAV80660.1    AXCN02000933    ACPB03008038    ACPB03008039    KQ434796    KZC05827.1    GDHC01005722    JAQ12907.1    GEDC01013469    JAS23829.1    ADMH02000632    ETN65527.1    KZ288340    PBC27758.1    AAAB01008960    EAA11689.4    EDO63788.1    AXCM01004109    AXCM01004110    LJIG01001098    KRT85842.1    KQ414615    KOC68698.1    CVRI01000001    CRK86213.1    KQ764883    OAD54309.1    GEGO01007237    JAR88167.1    LRGB01002391    KZS07779.1    GL437203    EFN70853.1    GDIP01110273    JAL93441.1    GDIQ01185937    JAK65788.1    GDIQ01058639    JAN36098.1    GDIQ01034246    JAN60491.1    GDIQ01229724    JAK22001.1    GDIP01152172    JAJ71230.1    GDIQ01184186    JAK67539.1    GDIP01235312    JAI88089.1    GDIQ01135863    JAL15863.1    GDIQ01140560    JAL11166.1    GDIP01059384    JAM44331.1    GDIQ01039500    JAN55237.1    GDIP01072926    JAM30789.1    GDIP01081175    GDIP01078678    JAM25037.1    GDIP01122916    JAL80798.1    GDIQ01116418    JAL35308.1    GDIP01196360    GDIP01084931    GDIP01083176    JAJ27042.1    GDIP01137270    GDIP01071730    GDIP01070276    JAM33439.1    GDIP01059383    JAM44332.1    GDIP01182210    JAJ41192.1    GDIQ01097020    JAL54706.1    GDIQ01269373    JAJ82351.1    GDIP01253851    GDIP01195310    GDIP01193958    JAI69550.1    GDIQ01207939    JAK43786.1    GDIP01238567    GDIP01235311    JAI84834.1    GDIQ01160748    JAK90977.1    GDIQ01135862    JAL15864.1    GDIP01124076    JAL79638.1    GDIQ01068533    JAN26204.1    GDIP01103167    JAM00548.1    GDIP01177932    JAJ45470.1    GDIQ01205141    JAK46584.1    GDIQ01154702    GDIQ01029003    JAN65734.1    ABJB010044607    ABJB010084407    ABJB010453184    ABJB010719693    ABJB010798131    ABJB011007751    ABJB011066376    DS949082    EEC18849.1    GDIQ01110719    JAL41007.1    GDIP01094724    JAM08991.1    ATLV01024204    KE525350    KFB50995.1    GDIP01084930    JAM18785.1    GDIQ01151801    JAK99924.1    GDIQ01205142    JAK46583.1    GDIQ01207938    JAK43787.1    GDIQ01077928    JAN16809.1    GDIQ01092373    JAL59353.1    GDIQ01269374    JAJ82350.1    GDIQ01005317    JAN89420.1    GDIQ01052690    JAN42047.1    GDIP01177931    JAJ45471.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000218220    UP000005205    + More
UP000078542    UP000078540    UP000078492    UP000007755    UP000008237    UP000078541    UP000075809    UP000075881    UP000075902    UP000279307    UP000215335    UP000002358    UP000192223    UP000005203    UP000076408    UP000075886    UP000015103    UP000069272    UP000076502    UP000075885    UP000000673    UP000242457    UP000007062    UP000076407    UP000075883    UP000075900    UP000075884    UP000053825    UP000183832    UP000075920    UP000076858    UP000000311    UP000075880    UP000001555    UP000030765   

PRIDE

H9J199   

Pfam

PF00041   fn3        + More
PF07679   I-set
PF06583   Neogenin_C
PF00047   ig

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR033024   Neogenin       
IPR013098   Ig_I-set       
IPR036116   FN3_sf       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR013783   Ig-like_fold       
IPR010560   Neogenin_C       
IPR013151   Immunoglobulin       
IPR003529   Hematopoietin_rcpt_Gp130_CS       
IPR013106   Ig_V-set       
IPR036396   Cyt_P450_sf       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       
SSF48264   SSF48264       

Gene 3D

2.60.40.10     1.10.630.10    

CDD

cd00063  FN3

ProteinModelPortal

H9J199   A0A2H1WRY9   A0A194PTN9   A0A0N1PFE0   A0A212F3D5   A0A2W1BWU2   + More
A0A2A4JUT9   A0A2A4JTN1   A0A212F1J6   A0A158P3C4   A0A195CWM6   A0A195BN55   A0A195DFJ3   F4W5X3   E2C3E0   A0A195EYT9   A0A224XGP9   A0A151XH75   A0A182KEB2   A0A182TTA5   A0A3L8DEQ7   A0A232FFG1   K7J3C6   V5I8X2   A0A1W4X9F8   A0A1W4X877   A0A087ZSG0   A0A182Y366   A0A1Y1M7T4   A0A182QE71   T1I1E7   A0A182FI15   A0A154P1U5   A0A146M2A7   A0A1B6DDS9   A0A182P0Y0   W5JMC4   A0A2A3E7S9   Q7Q623   A0A182XM71   A7UU12   A0A182M1U9   A0A0T6BEU8   A0A182R7X4   A0A182NME2   A0A0L7RCW9   A0A1J1HDZ4   A0A182WHR9   A0A310SL89   A0A147BBM2   A0A164QIC7   E2A6Y7   A0A182J115   A0A0P5UX89   A0A0P5KYM7   A0A0P6ES54   A0A0P6GET6   A0A0P5H937   A0A0P5DQP6   A0A0P5KKN1   A0A0P4Y0X2   A0A0P5NYW2   A0A0P5Q443   A0A0P5YH31   A0A0N8ECS1   A0A0P5XFH3   A0A0P5X1H7   A0A0P5UZW4   A0A0P5QT45   A0A0P5ANJ4   A0A0P5XLL3   A0A0N8D858   A0A0P5BPA1   A0A0P5S921   A0A0P5EVV4   A0A0P4WNJ2   A0A0N8B6J0   A0A0P4XSM5   A0A0P5NQE8   A0A0P5PQ66   A0A0P5TTV7   A0A0P6E2W6   A0A0N8CSI5   A0A0P5C0E8   A0A0P5J9C0   A0A0P6INE5   B7QJ27   A0A0P5RFN3   A0A0P5VXG0   A0A084WLA1   A0A0P5WMS4   A0A0P5NAK5   A0A0P5J3L4   A0A0P5J272   A0A0P6EEU7   A0A0P5SFR1   A0A0P5G0C7   A0A0P6IJI1   A0A0P6F6H1   A0A0P5C0B7  

PDB

3LAF     E-value=3.27566e-21,     Score=250

KEGG

101747166    no KO assigned | (RefSeq) neogenin

GO

GO:0016021   GO:0004896   GO:0007411   GO:0098632   GO:0070593   GO:0007156   GO:0005886   GO:0030424   GO:0005506   GO:0016705   GO:0020037   GO:0005515   GO:0008270   GO:0007608   GO:0016020   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887  

PANTHER

PTHR44170:SF14  

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01826

Exp number, first 60 AAs:

0.0008

Total prob of N-in:

0.00213

outside

1  -  354

 

 

Pi

180.291001

Theta

195.600933

Tajima's D

-0.918352

CLR

1203.786304

CSRT

0.152892355382231

Interpretation

Uncertain