Silkworm Genome Informatics Database

Gene

KWMTBOMO00668

Pre Gene Modal

BGIBMGA010114

Annotation

PREDICTED:_uncharacterized_protein_LOC105842017_[Bombyx_mori]

Location

Bomo_Chr2(+):21496-28507 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.65

CDS

ATGGAAGCAGTGCGTGGCGTGCCCGTGCTCACTGTGCTCACCGACACTCACACGACGCTACTACAGACCGTCCTGTGTGCTCAGCCACAAGGTAATGTATTTAATCAGAGCCGAATCACAAAGCGCATCCGCACCCTTTCTCAGCGAGCGCCGCCGGCACACCTGCAACGGTCGACGGCAGGCGGCTTGGATCACAGAGGGCGTCGGCACCCTTTGATGACTCGGATCACCGGCATATTTGCAACGATCAACGGCAGGCGGCTTGAATCACAGAGCGCACCGGCACCCTTTAACGGCTCCGGTCACCGGTACACTTGCAACGTTTGTGGCGATCGGCTTGGAACACACACCGCAGCGGCACCCTTTGATGGTGCGGGTCGCCGGCACACTTCAACGTTCGCGGCGGGCGGCTTGGATCACATACCGCAGCGGCACCCTTTGATGGCGCGAGTTGCCGGCACACTGGCTGACTATAAAAAGAGCTGCTACGCATTTAAAACCACGATGAACGATATGATGACTCAACTGTCTTACGATCATCGCGTAACCTTGACTGAAATGAACGGCACCATGAAATCAGAAGAAAATACGCGAGTGCGCATTGCCGACGTTTATTTTCCTACATATGACCCCGATTCTAGTACCGATGTACACGATTGGGTAGATCTTATTACACGTACTCAAGCAGAATATGGACTTCGAGATCATGAGGTACGATTAAAAGCAGCAAGTGTATTAAAAGGTCGTGCAAAGACATGGGCAGATAGTAGCCTCCTAAGGACAACAACCTGGACGGAAATGCGGGATGACATGTTGCAAACTTTCGAACCCGAATCCAGGTACTTTGCAGATATTCTGAGTTATAGAAATTACACCATTGACGAGGCAGAAAACATTCAAGATTTTATTTCAAACGTGTGGCGTATGTTCAAAAGGATAGTAAAACCTCATCCAACGGAACAGGATGCAGTAGAATTTGTCATTGGGAGCATTGGAGATGAACGGATTCGGACAGAACTGCTCAATAGCAAGTCAAATACTGTTCCGGAGTTAATTGCTATAGCCAAAACGTTTCGCAAACGAAAGAATATACCAACTAAACCGACTGAGTTCAGTAAGCAACCTCGTTTGAACTTTAATCGTGATAGATCCAACTTGACTTGTCATGTTTGTGGAAAAACAGGTCATTTTGCTGGATATTGCCCGGAAAATGCAATTCGACGTGGAACGTTTTCAGCATCAGGATCAGGAGCTTCTTTCTCATCAAGAGATTCGCCTGTACCATCCATTAAGGAGTGTTCCTACTGTAAAGGGACTCGACACACTACAGAAAGATGTTTTAAAAGAATTGCTGACGAACAACACAGAACGAAATGGATATGGACTGCCTCTCACGAAGTAACAAGATTAAACATAATCGATTACCGTACCTGCGCGCTGCTTCATACCATGTTCAAAGAGGGCGTACCAATTGAACTTCATACAGATGCAAGTGATGCTGATCCAACTATCACTCATATGAATTGGAGACTGTGGCTGTTAGACGAAGTTTTGTGCCAAAAAGTTAAGCTGGAGAATGGAAGAACTAAGACTCTAAAAGCGGTACCACAATGCTACCAATGGAGTATCATAAATAATTACCACAAAGTTTTAAAACACTTTGGCTGGGAGAAAGCACTCGAAAAACTCAAAGAACACTTTTGGTCTGACAAATTGAGCTCAAAAGTTCGCAGCTTCATAGACAATTGCGTGTACGGCATTGAACTGCACCACATCGTAGCATACACGAATAGATCAAACGGCCAGGCCAAAAGAATTTTCCGCATCGTTAAAGATGGACTCACTGTCATTAGTAATATTCAGCAGGATCACTGGGAACACAACTTGCTATTAACTGTACAGTACCTATCCAAAGCAACTGGGAAAGCACCTATGGAATGGAGCTAA

Protein

MEAVRGVPVLTVLTDTHTTLLQTVLCAQPQGNVFNQSRITKRIRTLSQRAPPAHLQRSTAGGLDHRGRRHPLMTRITGIFATINGRRLESQSAPAPFNGSGHRYTCNVCGDRLGTHTAAAPFDGAGRRHTSTFAAGGLDHIPQRHPLMARVAGTLADYKKSCYAFKTTMNDMMTQLSYDHRVTLTEMNGTMKSEENTRVRIADVYFPTYDPDSSTDVHDWVDLITRTQAEYGLRDHEVRLKAASVLKGRAKTWADSSLLRTTTWTEMRDDMLQTFEPESRYFADILSYRNYTIDEAENIQDFISNVWRMFKRIVKPHPTEQDAVEFVIGSIGDERIRTELLNSKSNTVPELIAIAKTFRKRKNIPTKPTEFSKQPRLNFNRDRSNLTCHVCGKTGHFAGYCPENAIRRGTFSASGSGASFSSRDSPVPSIKECSYCKGTRHTTERCFKRIADEQHRTKWIWTASHEVTRLNIIDYRTCALLHTMFKEGVPIELHTDASDADPTITHMNWRLWLLDEVLCQKVKLENGRTKTLKAVPQCYQWSIINNYHKVLKHFGWEKALEKLKEHFWSDKLSSKVRSFIDNCVYGIELHHIVAYTNRSNGQAKRIFRIVKDGLTVISNIQQDHWEHNLLLTVQYLSKATGKAPMEWS

Uniprot

A0A0L7LE80

Pubmed

26227816

EMBL

JTDY01001444 KOB73848.1

Proteomes

UP000037510

Pfam

PF17921 Integrase_H2C2

Interpro

IPR036397   RNaseH_sf        + More
IPR041588   Integrase_H2C2
IPR021109   Peptidase_aspartic_dom_sf
IPR012337   RNaseH-like_sf
IPR036875   Znf_CCHC_sf
IPR001995   Peptidase_A2_cat
IPR001584   Integrase_cat-core
IPR001969   Aspartic_peptidase_AS

SUPFAM

SSF50630   SSF50630        + More
SSF57756   SSF57756
SSF53098   SSF53098

Gene 3D

3.30.420.10

ProteinModelPortal

A0A0L7LE80

KEGG

105842017 no KO assigned | (RefSeq) uncharacterized LOC105842017

GO

GO:0015074 GO:0004190 GO:0008270 GO:0003676 GO:0007608 GO:0016020 GO:0005667 GO:0005737 GO:0004505 GO:0006559 GO:0004887 GO:0016021

Length:

648

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01065

Exp number, first 60 AAs:

0.00926

Total prob of N-in:

0.00059

outside

1 - 648

Pi

326.854741

Theta

176.630569

Tajima's D

3.483789

CLR

0.108498

CSRT

0.993100344982751

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree