Gene

KWMTBOMO00660

Pre Gene Modal

BGIBMGA003874

Annotation

PREDICTED:_hepatic_leukemia_factor_isoform_X10_[Bombyx_mori]

Location

Bomo_Chr1(+):20490064-20505290      View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear   Reliability : 3.447

CDS

ATGAACGGTCAACAGGTGGCGCGCGTGTCAGTATCTCGTATACTCATACACACTCAGTCATGCAAGTCCGTCAACACTAAGGAGACGCTCGAAGACAAGAAGGATGACAACGACCTCTGGGAGGCGCAGGCCGCCTTCTTGGGTCCCAACCTGTGGGACAAGACCCTGCCCTACGACCCCGATCTCAAGTACGTGGACCTAGATGAGTTCCTGTCGGAGAACGGCATGCCGGGCGAGGGCCTGGGCAGCACGCACCTGGGCGGCTCCGCGTTCGGGCCGGCGCTGGGCCTGCAGACTCCCATCACCAAGCGGGAGCGCTCTCCCTCGCCCTCCGACTGCATGAGCCCGGACACCATCAACCCGCCGCTTTCACCAGCCGATTCCACGTTCTCGATGGCATCGTCGGGCCGTGACTTCGATCCTCGGACGCGCGCCTTCTCCGACGAAGAGCTGAAGCCGCAGCCGATGATCAAGAAGTCCCGGAAACAGTTCGTGCCCGACGACCTGAAAGACGACAAGTACTGGGCGCGCCGACGGAAGAACAACATGGCGGCCAAGAGGTCCCGCGACGCACGCCGCATGAAGGAAAACCAGATCGCACTGCGGGCTGGATACCTCGAGAAGGAGAATATGGGCTTACGGCAAGAAGTGGAGCTGCTAAAGAAGGAAAACCACATCCTGCGTGAGAAGCTGTCCAAGTACGCGGACGTATAG

Protein

MNGQQVARVSVSRILIHTQSCKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPDLKYVDLDEFLSENGMPGEGLGSTHLGGSAFGPALGLQTPITKRERSPSPSDCMSPDTINPPLSPADSTFSMASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGYLEKENMGLRQEVELLKKENHILREKLSKYADV

Uniprot

H9J2Y7   A0A2W1BVX8   A0A2H1VFU0   A0A212EKF1   S5M3K1   T1E1N5   + More
A0A182GF57   E2BM48   A0A158NNQ8   A0A195EX79   A0A151WU73   E2A3G0   A0A0C9PZY8   Q17AL6   A0A195BS34   A0A158NNQ7   A0A158NNQ5   A0A1B0GJI9   F4WV39   B0X658   A0A1Q3FJ15   A0A1Q3FTY7   V9IAL7   A0A195DT07   V9IBY8   A0A087ZXM7   A0A154P1F8   A0A1Q3FJ09   A0A0J9RR91   A0A0R1DWI0   A0A0Q5UHD4   Q5U8V5   T1PAD8   A0A1W4VM10   A0A0K8TR27   A0A1J1IN55   W8AUJ7   A0A1Q3FIU3   W8AQP3   A0A034VJP2   A0A1S4FA34   A0A0M3QW22   A0A034VLC1   A0A0Q9XPQ2   A0A182FCR4   N6TMM6   A0A182IVX7   Q9TVQ4   M9PBV3   A0A0R1DW94   A0A0J9RQS8   A0A0R1DWL9   A0A0J9RSE0   A0A1W4VNF0   A0A1L8DIE9   V5IAA9   A0A0J9RQS3   A0A0Q5U2L2   Q7KKI2   A0A0R1DZQ7   K7IW05   Q6NL48   A0A1W4VMR3   A0A1W4VLZ6   W5JLB8   A0A0J9UGK2   A0A0R1E1I8   A0A0Q5UHG9   Q9TW49   A0A0Q9WS42   A0A2M4DS92   A0A2M3Z4P0   A0A2M4AEN4   A0A1W4VAB7   Q9TVY0   A0A2M4AGV8   A0A1W4VNE5   A0A3B0KP88   A0A084WEH6   A0A1Q3FTV8   A0A0R3P8U7   A0A182VNV8   A0A0K8VQC1   B4H2A8   U5EGJ8   A0A034VIM4   A0A0Q9XC19   A0A0Q9XEK6   A0A0Q9XCK4   Q9TVS7   A0A1I8NQ96   A0A0K8VHI2   Q86P99   A0A0Q9XJU4   A0A182YLU5   A0A0Q9XNL4   A0A0K8UKQ5   A0A034VGA9   A0A1A9XGC4  

Pubmed

19121390    28756777    22118469    24330624    26483478    20798317    + More
21347285    17510324    21719571    22936249    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    26369729    24495485    25348373    23537049    9409684    10926776    18057021    20075255    20920257    23761445    24438588    15632085    25244985   

EMBL

BABH01031184    KZ149976    PZC75913.1    ODYU01002331    SOQ39695.1    AGBW02014274    + More
OWR41961.1    KC857457    AGR44476.1    GALA01001494    JAA93358.1    JXUM01059217    JXUM01059218    KQ562041    KXJ76835.1    GL449153    EFN83234.1    ADTU01021718    ADTU01021719    ADTU01021720    ADTU01021721    ADTU01021722    ADTU01021723    ADTU01021724    KQ981953    KYN32507.1    KQ982745    KYQ51388.1    GL436428    EFN72024.1    GBYB01007133    JAG76900.1    CH477333    EAT43274.1    KQ976417    KYM89842.1    AJWK01021825    AJWK01021826    AJWK01021827    GL888384    EGI61927.1    DS232403    EDS41208.1    GFDL01007445    JAV27600.1    GFDL01004020    JAV31025.1    JR038214    AEY58163.1    KQ980530    KYN15654.1    JR038213    AEY58162.1    KQ434796    KZC05673.1    GFDL01007486    JAV27559.1    CM002912    KMY98227.1    CM000159    KRK01401.1    CH954178    KQS43290.1    AY775786    AE014296    AAV48825.1    AGB94241.1    KA645659    AFP60288.1    GDAI01000776    JAI16827.1    CVRI01000056    CRL01663.1    GAMC01018187    JAB88368.1    GFDL01007538    JAV27507.1    GAMC01018188    JAB88367.1    GAKP01016615    JAC42337.1    CP012525    ALC43393.1    GAKP01016614    JAC42338.1    CH933809    KRG06088.1    APGK01017995    APGK01017996    KB740064    ENN81749.1    AF172404    AF172407    AAF15508.1    AAN12021.1    AGB94242.1    KRK01398.1    KMY98226.1    KRK01397.1    KMY98224.1    GFDF01007929    JAV06155.1    GALX01001505    JAB66961.1    KMY98217.1    KMY98221.1    KQS43287.1    KQS43288.1    AF172402    BT003290    AAF15506.1    AAN12022.1    AAN12023.2    AAO25050.1    AHN57998.1    KRK01393.1    KRK01395.1    BT012493    AAS93764.1    ADMH02001103    ETN64103.1    KMY98220.1    KRK01402.1    KQS43286.1    AF172403    AAF15507.1    AAN12024.1    CH940647    KRF85031.1    GGFL01016211    MBW80389.1    GGFM01002740    MBW23491.1    GGFK01005896    MBW39217.1    AF209903    AAF15511.1    AAF20153.1    GGFK01006527    MBW39848.1    OUUW01000012    SPP86971.1    ATLV01023214    KE525341    KFB48620.1    GFDL01004021    JAV31024.1    CH379070    KRT08595.1    GDHF01011237    JAI41077.1    CH479203    EDW30460.1    GANO01003410    JAB56461.1    GAKP01016613    JAC42339.1    KRG06096.1    KRG06089.1    KRG06093.1    AF172406    AAF04509.1    AAF15510.1    GDHF01013955    JAI38359.1    BT003285    AAO25043.1    KRG06090.1    KRG06097.1    GDHF01025065    JAI27249.1    GAKP01016616    JAC42336.1   

Proteomes

UP000005204    UP000007151    UP000069940    UP000249989    UP000008237    UP000005205    + More
UP000078541    UP000075809    UP000000311    UP000008820    UP000078540    UP000092461    UP000007755    UP000002320    UP000078492    UP000005203    UP000076502    UP000002282    UP000008711    UP000000803    UP000095301    UP000192221    UP000183832    UP000092553    UP000009192    UP000069272    UP000019118    UP000075880    UP000002358    UP000000673    UP000008792    UP000268350    UP000030765    UP000001819    UP000075903    UP000008744    UP000095300    UP000076408    UP000092443   

PRIDE

H9J2Y7    Q5U8V5    Q9TVQ4    Q6NL48    Q9TW49    Q9TVY0    + More
Q9TVS7    Q86P99   

Pfam

PF07716   bZIP_2

Interpro

IPR040223   PAR_bZIP        + More
IPR004827   bZIP       

ProteinModelPortal

H9J2Y7   A0A2W1BVX8   A0A2H1VFU0   A0A212EKF1   S5M3K1   T1E1N5   + More
A0A182GF57   E2BM48   A0A158NNQ8   A0A195EX79   A0A151WU73   E2A3G0   A0A0C9PZY8   Q17AL6   A0A195BS34   A0A158NNQ7   A0A158NNQ5   A0A1B0GJI9   F4WV39   B0X658   A0A1Q3FJ15   A0A1Q3FTY7   V9IAL7   A0A195DT07   V9IBY8   A0A087ZXM7   A0A154P1F8   A0A1Q3FJ09   A0A0J9RR91   A0A0R1DWI0   A0A0Q5UHD4   Q5U8V5   T1PAD8   A0A1W4VM10   A0A0K8TR27   A0A1J1IN55   W8AUJ7   A0A1Q3FIU3   W8AQP3   A0A034VJP2   A0A1S4FA34   A0A0M3QW22   A0A034VLC1   A0A0Q9XPQ2   A0A182FCR4   N6TMM6   A0A182IVX7   Q9TVQ4   M9PBV3   A0A0R1DW94   A0A0J9RQS8   A0A0R1DWL9   A0A0J9RSE0   A0A1W4VNF0   A0A1L8DIE9   V5IAA9   A0A0J9RQS3   A0A0Q5U2L2   Q7KKI2   A0A0R1DZQ7   K7IW05   Q6NL48   A0A1W4VMR3   A0A1W4VLZ6   W5JLB8   A0A0J9UGK2   A0A0R1E1I8   A0A0Q5UHG9   Q9TW49   A0A0Q9WS42   A0A2M4DS92   A0A2M3Z4P0   A0A2M4AEN4   A0A1W4VAB7   Q9TVY0   A0A2M4AGV8   A0A1W4VNE5   A0A3B0KP88   A0A084WEH6   A0A1Q3FTV8   A0A0R3P8U7   A0A182VNV8   A0A0K8VQC1   B4H2A8   U5EGJ8   A0A034VIM4   A0A0Q9XC19   A0A0Q9XEK6   A0A0Q9XCK4   Q9TVS7   A0A1I8NQ96   A0A0K8VHI2   Q86P99   A0A0Q9XJU4   A0A182YLU5   A0A0Q9XNL4   A0A0K8UKQ5   A0A034VGA9   A0A1A9XGC4  

KEGG

101742096    K09057 hepatic leukemia factor | (RefSeq) hepatic leukemia factor

PATHWAY

04711    Circadian rhythm - fly - Bombyx mori (domestic silkworm)

GO

GO:0006357   GO:0003700   GO:0019216   GO:0001228   GO:0043565   GO:0007623   GO:0005634   GO:0006355   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887   GO:0016021  

PANTHER

PTHR11988  

Length:

237

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00529

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14076

outside

1  -  237

 

 

Pi

3.054489

Theta

5.859601

Tajima's D

-1.93244

CLR

0.213481

CSRT

0.015749212539373

Interpretation

Uncertain