Gene

KWMTBOMO00659

Pre Gene Modal

BGIBMGA003883

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_3-like_[Bombyx_mori]

Location

Bomo_Chr1(-):20451898-20453943      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.572 Nuclear   Reliability : 2.095

CDS

ATGCCGCGATTACTACAAAGCGAAATTATAAAGTATTTAGAAACTCTTGAAGATTCAGAAGATGGCTTAGACGGGTCAGACTCCGAAGTAGAGGATGAAGGTCACTATTATCAAACAGCTCGAGATGTTGTTCGAGACCTTGAAAATAGTGATGAAGGTGGAATGCCCAGTCTGATGAAGTGGATGCTGATCCTCCTCTCATTTGAGGTTTACAGTGGAGGGGGCTCCAAAAATAACATCTTACCTGGTGAGCCAGATTTGGGAGAGTCTGGCAATACAGTCGTCAGGTTAGCTAGAATGGTACCACGCAATGTGAATCACATTATATACTTCGATAACTTCTATACTTCTGTGCCTCTCGTCACCTATTTAGCTAAGGAAGGAATTTTCTCACTGGGAACAGTAAGAGTAAACCGATTGAGAAACTGCAAATTGCCTGAAAAAAGCACTATAATTAAAAAGAACGTACCCAGAGGATTCTATGAGGAAAACGTGGCGACTGTGGATGATATTGACGTAAGTGCTGTTGTGTGGAAAGATAACAAGCCCGTTAACCTTCTTTCCACTTACGTAGGAGCAAAACCAGCAATCACAGTCACACGCTTTGATAAATCGAAGAAAGAGAGAGTTGCTATTCCATGCCCCAAAGTCATCAAGGATTACAATTCCCACATGGGAGGCGTCGACTTATTAGATTCATTTATAGGTCGTTATCGCATCACAATGAAGAGCCGCAAGTGGACCATGCGCTTATTTTATCATTTCCTGGACCTCGCAGTTATAAATTCATGGGTTATGTTCAAGAAGGTAAATAATATAAAAGGAAATGATCAACTTCTCAATTTGGGTACATTCAGACTAGAACTTGCTGAAACCCTCTGCAAATTGGGTCTACCTGCAAATGGCGCTAAACGTGGTCGACCTAGTGGGAGCACAATACAAAGAGAACTTGTAATGAAGAAGTTCCGAGGACCAGCTCAAGCAATTCCTTTGAAAGACGTCAGATTGGATCAGACATGTCATTGGGCAGTTTGGCTGGATAAGCAGCAGAGGTGCAAATTCCCAAAATGTTCAGGCTTTACATTCAAAATGTGCCAAAAATGTCGTGTATCTTTATGTGATACGAAAAAAAGCAATTGTTTTTATAAATATCATAATGAAGAATAA

Protein

MPRLLQSEIIKYLETLEDSEDGLDGSDSEVEDEGHYYQTARDVVRDLENSDEGGMPSLMKWMLILLSFEVYSGGGSKNNILPGEPDLGESGNTVVRLARMVPRNVNHIIYFDNFYTSVPLVTYLAKEGIFSLGTVRVNRLRNCKLPEKSTIIKKNVPRGFYEENVATVDDIDVSAVVWKDNKPVNLLSTYVGAKPAITVTRFDKSKKERVAIPCPKVIKDYNSHMGGVDLLDSFIGRYRITMKSRKWTMRLFYHFLDLAVINSWVMFKKVNNIKGNDQLLNLGTFRLELAETLCKLGLPANGAKRGRPSGSTIQRELVMKKFRGPAQAIPLKDVRLDQTCHWAVWLDKQQRCKFPKCSGFTFKMCQKCRVSLCDTKKSNCFYKYHNEE

Uniprot

H9J2Z6   A0A2H1VR69   A0A2H1WTL9   H9JGZ6   H9JXX7   S4UKH5   + More
A0A087T4S1   A0A1E1WQY2   A0A2S2PBK5   A0A212EHM2   X1X2F2   J9LW60   A0A2H8TUQ3   A0A212FFX4   A0A3B3BTP2   A0A0A1WEM0   A0A146TTD4   A0A3P9K060   A0A3P9ITA5   A0A146R6K8   A0A1B6I2X1   A0A1B6K7Q3   A0A2H8TNX6   A0A3B3I560   J9M9C5   V5HIC5   A0A3P8SS87   A0A3B5R7A5   A0A3P9J3H4   A0A3B3I2Y1   A0A224YVZ2   A0A3B3IL37   A0A3B3I0J3   A0A3P9HE00   A0A3B3H5M7   J9KQV2   T1HDP7   A0A3P9I3M3   A0A3B3SQ04   A0A3P9LFA7   A0A3B3HE36   A0A3B3IE75   A0A3B5QXE4   A0A3P9IAA1   H2L551   A0A3B4ZMF2   A0A3P9LG76   A0A1B6MG92   A0A0P4W1S1   A0A146SI21   A0A3P9LX47   A0A3B3RJN9   A0A147BC68   H2T2T7   A0A3B3S9X6   A0A146PY66   V5HDK4   A0A3P9JUS2   A0A0K0EC24   A0A147BJS4   A0A3B3TU82   A0A3P9NMX7   A0A3B3XUL4   A0A090X7K4   A0A3B3TB08   A0A315UTZ6   A0A0S7MA33   M3ZMJ7   A0A3P9PHM0   A0A3P9PHH9   A0A3B3UK40   A0A3B3YVN1   A0A146S7X5   A0A3B4EUY8   A0A3B1KH96   A0A3P9IE40   A0A096M1J4   A0A3B4A161   A0A146VPP3   A0A147BBQ2   A0A3P9I8W3   T2MIT5   A0A087Y5J4   A0A3B5N0U8   A0A2S2NW57   A0A2H1X084   A0A147BJU4   A0A2J7Q3F6  

Pubmed

19121390    22118469    29451363    25830018    17554307    25765539    + More
23542700    28797301    29240929    29652888    21551351    25970599    29703783    25329095    25463417    24065732   

EMBL

BABH01031190    ODYU01003952    SOQ43341.1    ODYU01010930    SOQ56347.1    BABH01037818    + More
BABH01040586    BABH01040587    BABH01040588    JX392388    AGK25051.1    KK113395    KFM60110.1    GDQN01001619    JAT89435.1    GGMR01014224    MBY26843.1    AGBW02014856    OWR40986.1    ABLF02058363    ABLF02066746    ABLF02010159    GFXV01005864    MBW17669.1    AGBW02008750    OWR52641.1    GBXI01016833    JAC97458.1    GCES01090325    JAQ95997.1    GCES01122712    JAQ63610.1    GECU01026434    JAS81272.1    GECU01000219    JAT07488.1    GFXV01003527    MBW15332.1    ABLF02009142    GANP01011210    JAB73258.1    GFPF01010630    MAA21776.1    ABLF02009898    ACPB03028099    GEBQ01005051    JAT34926.1    GDRN01091243    GDRN01091242    JAI60307.1    GCES01106053    JAQ80269.1    GEGO01007352    JAR88052.1    GCES01137554    JAQ48768.1    GANP01011226    JAB73242.1    GEGO01004386    JAR91018.1    GBIH01002643    JAC92067.1    NHOQ01002733    PWA15177.1    GBYX01091460    JAO98581.1    GCES01109695    JAQ76627.1    AYCK01018182    GCES01066870    JAR19453.1    GEGO01007223    JAR88181.1    HAAD01005618    CDG71850.1    AYCK01002766    GGMR01008842    MBY21461.1    ODYU01012425    SOQ58723.1    GEGO01004410    JAR90994.1    NEVH01019067    PNF23115.1   

Proteomes

UP000005204    UP000054359    UP000007151    UP000007819    UP000261560    UP000265180    + More
UP000265200    UP000001038    UP000265080    UP000002852    UP000015103    UP000261540    UP000261400    UP000265000    UP000005226    UP000035681    UP000261500    UP000242638    UP000261480    UP000261460    UP000018467    UP000028760    UP000261520    UP000261380    UP000235965   

PRIDE

H9J2Z6    H9JGZ6    H9JXX7   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF06371   Drf_GBD
PF02181   FH2
PF06367   Drf_FH3

Interpro

IPR029526   PGBD        + More
IPR042201   FH2_Formin_sf       
IPR010472   FH3_dom       
IPR015425   FH2_Formin       
IPR011989   ARM-like       
IPR014767   DAD_dom       
IPR016024   ARM-type_fold       
IPR010473   GTPase-bd       
IPR014768   GBD/FH3_dom       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.20.58.2220     1.25.10.10    

ProteinModelPortal

H9J2Z6   A0A2H1VR69   A0A2H1WTL9   H9JGZ6   H9JXX7   S4UKH5   + More
A0A087T4S1   A0A1E1WQY2   A0A2S2PBK5   A0A212EHM2   X1X2F2   J9LW60   A0A2H8TUQ3   A0A212FFX4   A0A3B3BTP2   A0A0A1WEM0   A0A146TTD4   A0A3P9K060   A0A3P9ITA5   A0A146R6K8   A0A1B6I2X1   A0A1B6K7Q3   A0A2H8TNX6   A0A3B3I560   J9M9C5   V5HIC5   A0A3P8SS87   A0A3B5R7A5   A0A3P9J3H4   A0A3B3I2Y1   A0A224YVZ2   A0A3B3IL37   A0A3B3I0J3   A0A3P9HE00   A0A3B3H5M7   J9KQV2   T1HDP7   A0A3P9I3M3   A0A3B3SQ04   A0A3P9LFA7   A0A3B3HE36   A0A3B3IE75   A0A3B5QXE4   A0A3P9IAA1   H2L551   A0A3B4ZMF2   A0A3P9LG76   A0A1B6MG92   A0A0P4W1S1   A0A146SI21   A0A3P9LX47   A0A3B3RJN9   A0A147BC68   H2T2T7   A0A3B3S9X6   A0A146PY66   V5HDK4   A0A3P9JUS2   A0A0K0EC24   A0A147BJS4   A0A3B3TU82   A0A3P9NMX7   A0A3B3XUL4   A0A090X7K4   A0A3B3TB08   A0A315UTZ6   A0A0S7MA33   M3ZMJ7   A0A3P9PHM0   A0A3P9PHH9   A0A3B3UK40   A0A3B3YVN1   A0A146S7X5   A0A3B4EUY8   A0A3B1KH96   A0A3P9IE40   A0A096M1J4   A0A3B4A161   A0A146VPP3   A0A147BBQ2   A0A3P9I8W3   T2MIT5   A0A087Y5J4   A0A3B5N0U8   A0A2S2NW57   A0A2H1X084   A0A147BJU4   A0A2J7Q3F6  

KEGG

105841446    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 3-like

GO

GO:0016021   GO:0007015   GO:0003779   GO:0017048  

Length:

388

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.80963

Exp number, first 60 AAs:

0.00145

Total prob of N-in:

0.02769

outside

1  -  388

 

 

Pi

16.71469

Theta

21.016982

Tajima's D

-0.593798

CLR

0.022306

CSRT

0.218539073046348

Interpretation

Uncertain