SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00658
Annotation
PREDICTED:_uncharacterized_protein_LOC105842356_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.041 PlasmaMembrane   Reliability : 1.218
 

Sequence

CDS
ATGCCCCTCTACCTCCACCGGCTAGTTGGCTCCTATTTGGAGGCCAGGTCGGTCGAATGTACCGGGTTCGGTGGGACCCTTCACCGTTTTCCGATTTTGCGTGGTGTTCCGCAGGGGTCGGTTCTCGGACCCCTCTTGTGGAACATCGGGTACGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTCCACGTTATTTGTTACGCGGACGACACGTTGGTCGTCGCCCGGGGGGATGATTATAGAGAGTCTGCCCGTCTCGCCACAGCGGGATTGGCCCTCGTTGTCGGGAGGATAAGGAGACTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCTTGTGGATGGCCCTGTACGGTGCGCTTGTATGGGCTGAGCCACGCAACCGGGCCGCTATGGCTCGGTTCCTGCGCCGGCCGCAGCGCACCATTGCTATCAGGGTCATCCGTGGATATCGCACCGTCTCCTTCGAGGCGGCGTGTGTGTTGGCCGCCATGGGAGCTGGAGGCGGAGTCGCTCGCTGCCGACTATCGGTGGTGCAGCGAGCTTCGTGCTCTGGGCGTGACCTGGACACGGCGGAGCATACGCTCGCTGTCTGCCCCGCTTGGGAGGTGCAGCGCCGTGTCCTGGTCGCAAAGATAGGACGGGACTTGTCGCTGCCTGGCGTCGTGGCGTCGATGCTTGGCGGTGAAGAGTCCTGGAAGGCTATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGGGCGAGTGAGGCAAAGCTCTCCTCACTACGCAGAAATCCGCCGCCGCCGAGCAGGGGTCGGGACCGGGGTCTCGTCCGTAACCCGGCCCCCTAAGAGCTTCAAGCTCCACCCGTTGTGTGCGGGAAGGAGCCTAGGCGTGGAGCGGCGTGATAAGCCGCGTTCCCCCGACTGCTCCGGGGGAAGGTGTAGCGCAGCGCCATCAATGCGGGCTCTTGGCCCGTCGACCGAGGGAACCGGCGGTCGTGTCGCTGGCGGCCGCCGGTCCGGCGTCTGGGGGACGGCGGGATGGATGTAA
Protein
MPLYLHRLVGSYLEARSVECTGFGGTLHRFPILRGVPQGSVLGPLLWNIGYDWVLRGALLPGLHVICYADDTLVVARGDDYRESARLATAGLALVVGRIRRLGLDVALSKSEALWMALYGALVWAEPRNRAAMARFLRRPQRTIAIRVIRGYRTVSFEAACVLAAMGAGGGVARCRLSVVQRASCSGRDLDTAEHTLAVCPAWEVQRRVLVAKIGRDLSLPGVVASMLGGEESWKAMLDFCECTISQKEAGRVRQSSPHYAEIRRRRAGVGTGVSSVTRPPKSFKLHPLCAGRSLGVERRDKPRSPDCSGGRCSAAPSMRALGPSTEGTGGRVAGGRRSGVWGTAGWM

Summary

Uniprot
Pfam
PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
Interpro
IPR005135   Endo/exonuclease/phosphatase        + More
IPR036875   Znf_CCHC_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
SUPFAM
SSF56219   SSF56219        + More
SSF57756   SSF57756       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
348
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.904409999999999
Exp number, first 60 AAs:
0.04355
Total prob of N-in:
0.01462
outside
1  -  348
 
 

Population Genetic Test Statistics

Pi
6.079481
Theta
17.115271
Tajima's D
-1.576846
CLR
0.070867
CSRT
0.047997600119994
Interpretation
Uncertain
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