SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00657
Pre Gene Modal
BGIBMGA003871
Annotation
PREDICTED:_uncharacterized_protein_LOC106102669_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.936
 

Sequence

CDS
ATGGCGTTGGCGCTGGTATTGGTACTGGCGTGGAGTGCAGTAGTGTCAGCGGCCAGGTTCAGCGACTACTCTGGGGCTAAAATGCCACAGTACGAAACAGGCGACGAAGGATCTGATGACGCAGAGTCCTTGCTTGAAGACTACCACGGACACTCACCAGACGCCTCCTCACCTCTCGATTATAAGTATGAAGAAGATATTAAATATGGTAAAACAGAAAGTTTGGAAAGAGAAGCCGAAGTCGAAACATGGAAAAAATCTAAGGGAAGAAGGCGAGTAGTAATCGATTCCCAAGATACTCACGACACAGAATTTGATAACGAATTGGAAGCTGACTTCGGACGCAGGAGACCTAACCAGAATTATTTTCAGCGCAATCCAAAAACGAAGAGTTGGAACTATCGCGAAGACAACATAGCTGCTTTACGAAAGTCAATGCGGCATGGTCGCAGTAAGAATATAAGGGAACCTGATAATAATAATGAAGACAATTATGTAGAAAAAAAAGAATTCAGAAGAAATAAAAACAAAGAGTTTGACGATGATGATGATGATGAAAGATATAAAGAAAGCACAAAAAGAGTAGTAAGAAGAAAGCCGAGAGATAGAGTTCCCGTTCGACATTTTAATGTTGATTTAAATGGAGATTTAGTACCAGATAGAAGGGTTAAAAACGAGGAGCTGGACTATGCCAATGTCAATGAAGAGAGACGAAGAAGACCGACTTTAATTCACTCGCAAGAAGACCGCTACAGACCAAGCATTGATGATGAAGATCTTCGACTTAGAAAAAAACAGAACAAGAAAATTTTTGACGAAGATGGAGATTACTATGATATGAAAAGAGTAGAGAATATAAAGAGCAAGTTACCAATTCTACTACAACGAACTTCCGCGACGACGTTTGTGTCGACACCCAGCAGCGCGAACATCATCGACGTGCTGTGGACATATCGGCGCGCTGAATCTCCCTCATCGTCGTCTACCAGCCATCTACCGCCATCTGAGACGACAACTCGATCCAGTACAGCAGCACCTACCACAACACTCACGTTAAATATGACTAAATCAAACAACTCATCCCAAGAGCTATCACTAGCAGAGAAATCTAGGTTATCAATTTTGAAAAAGGCACAGCGTAAAGAAAGTATCAAAATTGGTTCATCAACGAAAAAGCCTCCTGTGTTGTTGCAAGTGACAGTTAAAATACCCACAGTGGTAATGGTGGAGCCTCCAAGCTCGGAGGTAATACTGCCGAGGGCTCGCGAATTCTCAGAAGATACTCCAGAGAGGTTGAACCGAGCGAAGCATCTCATGAGGAAGAAACTCATCGCTAGAGCCAAAAACATTCAAGACCTCACTGATAATTGGGATGAAGTCGTTTGTGATTACATTGATGTGGCCCTCTTGGATTGTGCTCCTAATACGTGTATTAATATTTTATTTACCATTTTACCACCTCTAGTATTGTTTTTATTTTAA
Protein
MALALVLVLAWSAVVSAARFSDYSGAKMPQYETGDEGSDDAESLLEDYHGHSPDASSPLDYKYEEDIKYGKTESLEREAEVETWKKSKGRRRVVIDSQDTHDTEFDNELEADFGRRRPNQNYFQRNPKTKSWNYREDNIAALRKSMRHGRSKNIREPDNNNEDNYVEKKEFRRNKNKEFDDDDDDERYKESTKRVVRRKPRDRVPVRHFNVDLNGDLVPDRRVKNEELDYANVNEERRRRPTLIHSQEDRYRPSIDDEDLRLRKKQNKKIFDEDGDYYDMKRVENIKSKLPILLQRTSATTFVSTPSSANIIDVLWTYRRAESPSSSSTSHLPPSETTTRSSTAAPTTTLTLNMTKSNNSSQELSLAEKSRLSILKKAQRKESIKIGSSTKKPPVLLQVTVKIPTVVMVEPPSSEVILPRAREFSEDTPERLNRAKHLMRKKLIARAKNIQDLTDNWDEVVCDYIDVALLDCAPNTCINILFTILPPLVLFLF

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.993027
 
 
Length:
493
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.92577
Exp number, first 60 AAs:
1.61146
Total prob of N-in:
0.08369
outside
1  -  493
 
 

Population Genetic Test Statistics

Pi
6.974376
Theta
11.932214
Tajima's D
-0.897897
CLR
0.003248
CSRT
0.155092245387731
Interpretation
Uncertain
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