Gene

KWMTBOMO00649

Pre Gene Modal

BGIBMGA003889

Annotation

PREDICTED:_ATP_synthase_subunit_gamma?_mitochondrial-like_[Amyelois_transitella]

Location

Bomo_Chr1(-):20046186-20047244      View in EpiBrowser

Full name

ATP synthase subunit gamma      

Location in the cell

Mitochondrial   Reliability : 2.425

CDS

ATGGTACAGTTGAAACAAGTGTCCCTAAGATTAAAATCGATAAAAAACATACAGAAGATTACCAAAACTATGAAAATGGTTTCCGCTAGCAAGTTTACAAAAGCAGAACGCGAACTGCAAGCAGCGAGGCCTTTCGGTTATGGCCCTAGGAAGTTCTACGAATCTTCTCGATTGATAAAGGCGGCTGTGGACAGCAAAGATAAGAAAGACGCCGCCGCTGTCCCCGAACCAGTGCAGGAGAAACCGGAAGACCAGGAGGCCCAAAAGAAACTCAAAAGGATTTATATAGCTATGACGTCTGACAGAGGTATCTAA

Protein

MVQLKQVSLRLKSIKNIQKITKTMKMVSASKFTKAERELQAARPFGYGPRKFYESSRLIKAAVDSKDKKDAAAVPEPVQEKPEDQEAQKKLKRIYIAMTSDRGI

Subunit

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.

Similarity

Belongs to the ATPase gamma chain family.

Feature

chain  ATP synthase subunit gamma

Uniprot

A0A212EKD8   A0A2W1BPS2   A0A2H1VKF2   A0A2A4JR83   H9J302   A0A194PLV8   + More
A0A194QZB7   G9D524   G9D525   G9D521   G9D529   G9D528   G9D531   G9D522   G9D520   G9D527   G9D530   G9D523   G9D519   G9D526   G9D518   A0A3G1T1C7   A0A2A4JBB2   A0A1I8QC49   A0A095A1I0   A0A183M325   A0A183KX31   I4DJ96   S4NNE5   A0A212F7F8   T1PF90   A0A2W1B7N2   A0A2H1WBL5   A0A183WF96   A0A3P8JAL4   W8BR16   A0A0N4Z0G2   A0A1A9X5G8   A0A1Y1LVM0   A0A0K0FN58   G4LVB6   A0A182JWN3   A0A2P2HWM3   A0A1L8EEQ6   A0A0L0C3Z3   G4LVB9   A0A3B0EA27   Q1HPX4   T1JKD0   A0A183QA92   A0A0A1WI89   A0A182NTJ6   A0A182PD01   A0A182QIX0   A0A194QVY4   Q7Q3N8   A0A182XZU4   A0A182UP01   A0A182L1Z8   A0A182UFE6   A0A182HV43   A0A182LYU4   A0A182W7I1   A0A182WT48   Q5DBP4   A0A1D2N7T7   E0VFT5   C1LBB8   A0A1A9VLY0   D3TMX6   A0A0K0EQT5   A0A1W4WJB5   A0A310SJI5   A0A1B0AFH2   B4G663   Q29AN8   A0A210Q163   A0A0K8VMQ3   A0A034WFC0   A0A0C9PX20   A0A0A9Z7I7   B0FWR7   A0A0K8U3G5   A0A0T6BGI0   A0A1B0FAP1   A0A182RJB1   C1LVF7   A0A1B6MUF0   A0A2R7WX91   A0A2M3YZ82   A0A023ENY5   A3EY11   Q16XK3   W5JNX9   A0A0N5BRZ9   A0A2M4A2J6   A0A182F302   B3MTI4   A0A0M4ET73  

Pubmed

22118469    28756777    19121390    26354079    21967427    22246508    + More
22651552    23622113    25315136    24495485    28004739    22253936    26108605    25830018    12364791    14747013    17210077    25244985    20966253    16617374    27289101    20566863    20353571    17994087    15632085    23185243    28812685    25348373    25401762    26823975    24945155    26483478    17510324    20920257    23761445   

EMBL

AGBW02014274    OWR41946.1    KZ150031    PZC74730.1    ODYU01003024    SOQ41271.1    + More
NWSH01000836    PCG73932.1    BABH01031222    BABH01031223    KQ459599    KPI94312.1    KQ460953    KPJ10320.1    JF777427    AEU11772.1    JF777428    AEU11773.1    JF777424    AEU11769.1    JF777432    AEU11777.1    JF777431    AEU11776.1    JF777434    AEU11779.1    JF777425    AEU11770.1    JF777423    AEU11768.1    JF777430    AEU11775.1    JF777433    AEU11778.1    JF777426    AEU11771.1    JF777422    AEU11767.1    JF777429    AEU11774.1    JF777421    AEU11766.1    MG846921    AXY94773.1    NWSH01002112    PCG69139.1    KL251729    KGB41130.1    UZAI01005408    VDO90413.1    UZAK01042841    VDP69724.1    AK401364    KQ459583    BAM17986.1    KPI98617.1    GAIX01012289    JAA80271.1    AGBW02009877    OWR49666.1    KA647354    AFP61983.1    KZ150244    PZC71889.1    ODYU01007571    SOQ50453.1    UZAO01067245    VDQ06679.1    GAMC01010884    JAB95671.1    GEZM01050230    GEZM01050229    JAV75666.1    CABG01000013    CCD58855.1    IACF01000394    LAB66171.1    GFDG01001618    JAV17181.1    JRES01001003    KNC26199.1    CCD58858.1    RBVL01000238    RKO10274.1    BABH01018421    DQ443278    ABF51367.1    JH431830    GBXI01015931    JAC98360.1    AXCN02000699    KQ461103    KPJ09474.1    AAAB01008964    EAA12854.3    APCN01002493    AXCM01002571    AY815030    FN316264    FN316266    FN316267    FN316268    FN316269    FN316270    FN316271    FN316272    FN316273    FN322956    FN322959    FN322960    FN322962    FN322963    FN322964    FN322965    FN322966    FN322967    FN322968    FN322969    FN322970    FN322971    FN322972    AAW26762.1    CAX71995.1    LJIJ01000160    ODN01324.1    DS235124    EEB12241.1    FN316265    CAX71996.1    EZ422778    ADD19054.1    KQ760551    OAD59818.1    CH479179    EDW23816.1    CM000070    EAL27311.1    NEDP02005265    OWF42490.1    GDHF01012143    JAI40171.1    GAKP01006469    JAC52483.1    GBYB01006053    JAG75820.1    GBHO01004281    GDHC01013990    JAG39323.1    JAQ04639.1    EU358107    ABY62749.1    GDHF01031075    JAI21239.1    LJIG01000515    KRT86425.1    CCAG010009218    FN322961    CAX78685.1    GEBQ01000422    JAT39555.1    KK855861    PTY24152.1    GGFM01000831    MBW21582.1    JXUM01116988    GAPW01002938    KQ566040    JAC10660.1    KXJ70434.1    EF092079    ABN12071.1    CH477537    EAT39355.1    ADMH02000571    ETN65841.1    GGFK01001696    MBW35017.1    CH902623    EDV30574.1    CP012526    ALC48060.1   

Proteomes

UP000007151    UP000218220    UP000005204    UP000053268    UP000053240    UP000095300    + More
UP000050790    UP000277204    UP000050789    UP000095301    UP000050795    UP000038045    UP000091820    UP000035680    UP000008854    UP000075881    UP000037069    UP000276569    UP000050792    UP000075884    UP000075885    UP000075886    UP000007062    UP000076408    UP000075903    UP000075882    UP000075902    UP000075840    UP000075883    UP000075920    UP000076407    UP000094527    UP000009046    UP000078200    UP000035681    UP000192223    UP000092445    UP000008744    UP000001819    UP000242188    UP000092444    UP000075900    UP000069940    UP000249989    UP000008820    UP000000673    UP000046392    UP000069272    UP000007801    UP000092553   

PRIDE

H9J302    Q1HPX4   

Pfam

PF00231   ATP-synt        + More
PF00467   KOW
PF17136   ribosomal_L24

Interpro

IPR023632   ATP_synth_F1_gsu_CS        + More
IPR035968   ATP_synth_F1_ATPase_gsu       
IPR000131   ATP_synth_F1_gsu       
IPR003256   Ribosomal_L24       
IPR014722   Rib_L2_dom2       
IPR041988   KOW_RPL26/RPL24       
IPR008991   Translation_prot_SH3-like_sf       
IPR005825   Ribosomal_L24/26_CS       
IPR005824   KOW       

SUPFAM

SSF52943   SSF52943        + More
SSF50104   SSF50104       

Gene 3D

2.30.30.30    

CDD

cd12151  F1-ATPase_gamma
cd06089  KOW_RPL26

ProteinModelPortal

A0A212EKD8   A0A2W1BPS2   A0A2H1VKF2   A0A2A4JR83   H9J302   A0A194PLV8   + More
A0A194QZB7   G9D524   G9D525   G9D521   G9D529   G9D528   G9D531   G9D522   G9D520   G9D527   G9D530   G9D523   G9D519   G9D526   G9D518   A0A3G1T1C7   A0A2A4JBB2   A0A1I8QC49   A0A095A1I0   A0A183M325   A0A183KX31   I4DJ96   S4NNE5   A0A212F7F8   T1PF90   A0A2W1B7N2   A0A2H1WBL5   A0A183WF96   A0A3P8JAL4   W8BR16   A0A0N4Z0G2   A0A1A9X5G8   A0A1Y1LVM0   A0A0K0FN58   G4LVB6   A0A182JWN3   A0A2P2HWM3   A0A1L8EEQ6   A0A0L0C3Z3   G4LVB9   A0A3B0EA27   Q1HPX4   T1JKD0   A0A183QA92   A0A0A1WI89   A0A182NTJ6   A0A182PD01   A0A182QIX0   A0A194QVY4   Q7Q3N8   A0A182XZU4   A0A182UP01   A0A182L1Z8   A0A182UFE6   A0A182HV43   A0A182LYU4   A0A182W7I1   A0A182WT48   Q5DBP4   A0A1D2N7T7   E0VFT5   C1LBB8   A0A1A9VLY0   D3TMX6   A0A0K0EQT5   A0A1W4WJB5   A0A310SJI5   A0A1B0AFH2   B4G663   Q29AN8   A0A210Q163   A0A0K8VMQ3   A0A034WFC0   A0A0C9PX20   A0A0A9Z7I7   B0FWR7   A0A0K8U3G5   A0A0T6BGI0   A0A1B0FAP1   A0A182RJB1   C1LVF7   A0A1B6MUF0   A0A2R7WX91   A0A2M3YZ82   A0A023ENY5   A3EY11   Q16XK3   W5JNX9   A0A0N5BRZ9   A0A2M4A2J6   A0A182F302   B3MTI4   A0A0M4ET73  

PDB

2W6J     E-value=1.89969e-11,     Score=160

KEGG

101742678    K02136 F-type H+-transporting ATPase subunit gamma | (RefSeq) ATP synthase subunit gamma, mitochondr

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0015986   GO:0045261   GO:0046933   GO:0006754   GO:0006811   GO:0003735   GO:0006412   GO:0005840   GO:0000275   GO:0005216   GO:0006355   GO:0043565   GO:0003677   GO:0003707   GO:0004887   GO:0016021  

PANTHER

PTHR11693  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.31656

outside

1  -  104

 

 

Pi

11.0478

Theta

16.392153

Tajima's D

-1.200388

CLR

0

CSRT

0.101994900254987

Interpretation

Uncertain