Gene

KWMTBOMO00647

Pre Gene Modal

BGIBMGA003889

Annotation

PREDICTED:_ATP_synthase_subunit_gamma?_mitochondrial-like_[Amyelois_transitella]

Location

Bomo_Chr1(-):20035475-20035794      View in EpiBrowser

Full name

ATP synthase subunit gamma      

Location in the cell

Cytoplasmic   Reliability : 1.131 Nuclear   Reliability : 1.209

CDS

ATGACAGCCTTCGATGACGTGGATGACGACCAGCTGGAGTGCTACGCGGAGTGGACCCTCGCCGCGCTCCTCTACTACGCGTTGAAGCAAGGCGCGGCTTCAGAACAGTCTGCCCGGATGGCTGCCATGGACAACGCTACGAAGAACGCATCCGAAATGATCAGGAAACTGACGCTGCTCTTCAACAGAACGAGACAAGCAGTCATCACCAGGGAGCTTATTGAAATCATTTCAGGAGCGGCGGCTTTAAAGTGA

Protein

MTAFDDVDDDQLECYAEWTLAALLYYALKQGAASEQSARMAAMDNATKNASEMIRKLTLLFNRTRQAVITRELIEIISGAAALK

Subunit

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.

Similarity

Belongs to the ATPase gamma chain family.

Uniprot

H9J302   A0A2W1BPS2   A0A2A4JR52   A0A2A4JR83   A0A194PLV8   A0A194QZB7   + More
A0A2H1VKF2   A0A212EKD8   A0A0L7LA84   A0A091EGE1   U3IK89   F6SJM8   A0A1X7VD82   S9W3T2   Q1HPX4   K7P5E1   A0A0P6CI98   A0A2G9S1E0   A0A1D1ZG56   A0A2G9S1B1   U6DD18   A0A0P4VV79   R4FNB9   K7P534   T1HN70   L5LBI1   A0A1S3EKA9   A0A3L7I0Q9   A0A2I0T2W2   A0A3M6U7F3   F4WG50   F7F7L6   A0A1L1RPA5   L9KQG5   A0A023F8R4   A0A0C9QPL6   L5L0J2   G1NXI0   C1C3J8   A0A069DRH5   D6WPW7   G3TDA5   A0A341AG22   A0A2U4B6F4   S7NQV4   G3GR61   A0A2U3YCA8   K7P595   A0A0L7LUJ4   A0A2K6MWG2   A0A250YEF4   I4DJ96   S4NNE5   Q4R7P5   A0A2Y9HL94   R0LGI8   A0A2S2R2P5   D2I3D1   A0A1S3AFZ6   A0A2Y9HSU1   A0A2Y9R6L4   G1SM77   A0A2Y9H1B6   A0A0V0G371   A0A2U3ZDN1   B4DL14   A0A1L1RQ30   A0A212F7F8   A0A2U3V799   A0A340XXI4   A0A224XPP2   A0A1D5PXH6   A0A0K0DQ69   A0A2Y9NLH3   H0VH31   K9IZN0   A0A2Y9KRW5   A0A2U3V6X1   A0A340Y055   A0A2R7WX91   K9KF86   A0A341ABI7   A0A286XFY1   A0A2Y9NY33   A0A0N4TC37   A0A2K6D1F5   A0A2K6D1F4   A0A341ABQ1   A0A3Q0DE26   A0A2K6N6Z9   A0A3M0KGV2   A0A2K6FE13   A0A3Q0DL77   A0A2Y9KYQ2   A8Y2E9   A0A0A9Z7I7   E3N566   A0A261BUR5   A0A2K6N702   A0A026WWE4  

Pubmed

19121390    28756777    26354079    22118469    26227816    23749191    + More
19892987    23149746    22438331    27129103    29704459    30382153    21719571    18464734    23385571    25474469    23258410    21993624    26334808    18362917    19820115    21804562    28087693    22651552    23622113    15944441    20010809    25362486    14624247    25401762    26823975    26114425    26394399    24508170    30249741   

EMBL

BABH01031222    BABH01031223    KZ150031    PZC74730.1    NWSH01000836    PCG73933.1    + More
PCG73932.1    KQ459599    KPI94312.1    KQ460953    KPJ10320.1    ODYU01003024    SOQ41271.1    AGBW02014274    OWR41946.1    JTDY01002019    KOB72310.1    KN121943    KFO34506.1    ADON01089360    ADON01089361    ADON01089362    KB020093    EPY72642.1    BABH01018421    DQ443278    ABF51367.1    JU062556    AFC92867.1    GDIP01001512    JAN02204.1    KV927954    PIO33875.1    GDJX01002097    JAT65839.1    PIO33874.1    HAAF01009026    CCP80850.1    GDKW01000647    JAI55948.1    GAHY01001359    JAA76151.1    JU062554    AFC92865.1    ACPB03017427    KB113569    ELK23537.1    RAZU01000120    RLQ71713.1    KZ522286    PKU28136.1    RCHS01002096    RMX49557.1    GL888128    EGI66817.1    KB320704    ELW64996.1    GBBI01000906    JAC17806.1    GBYB01005564    JAG75331.1    KB030418    ELK16910.1    AAPE02016991    AAPE02016992    BT081427    ACO51558.1    GBGD01002379    JAC86510.1    KQ971354    EFA07448.1    KE164710    EPQ19646.1    JH000001    EGV95073.1    JU062555    AFC92866.1    JTDY01000057    KOB79120.1    GFFW01002854    JAV41934.1    AK401364    KQ459583    BAM17986.1    KPI98617.1    GAIX01012289    JAA80271.1    AB168770    BAE00877.1    KB743338    EOA99357.1    GGMS01014847    MBY84050.1    GL194296    EFB18250.1    AAGW02026845    AAGW02026846    GECL01003595    JAP02529.1    AK296803    BAG59376.1    AGBW02009877    OWR49666.1    GFTR01004628    JAW11798.1    AAKN02021916    AAKN02021917    GABZ01007211    JAA46314.1    KK855861    PTY24152.1    JL626894    AEQ00022.1    UZAD01004376    UZAD01006801    VDN86924.1    VDN88006.1    QRBI01000112    RMC10484.1    HE600977    CAP39071.1    GBHO01004281    GDHC01013990    JAG39323.1    JAQ04639.1    DS268530    DS268575    NMWX01000006    LFJK02000008    EFO87043.1    EFO91108.1    OZF97601.1    POM45268.1    NIPN01000072    OZG14062.1    KK107085    QOIP01000008    EZA60056.1    RLU19527.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000028990    UP000016666    UP000002281    UP000007879    UP000015103    UP000081671    UP000273346    UP000275408    UP000007755    UP000002279    UP000011518    UP000010552    UP000001074    UP000007266    UP000007646    UP000252040    UP000245320    UP000001075    UP000245341    UP000233180    UP000248481    UP000079721    UP000248480    UP000001811    UP000245340    UP000265300    UP000035642    UP000248483    UP000005447    UP000248482    UP000038020    UP000278627    UP000233120    UP000189704    UP000233200    UP000269221    UP000233160    UP000008549    UP000008281    UP000216624    UP000237256    UP000216463    UP000053097    UP000279307   

PRIDE

H9J302    F6SJM8    Q1HPX4    G3GR61    B4DL14    A8Y2E9    + More

Pfam

PF00231   ATP-synt        + More
PF00628   PHD
PF07524   Bromo_TP

Interpro

IPR035968   ATP_synth_F1_ATPase_gsu        + More
IPR023632   ATP_synth_F1_gsu_CS       
IPR000131   ATP_synth_F1_gsu       
IPR009072   Histone-fold       
IPR019786   Zinc_finger_PHD-type_CS       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR006565   BTP       
IPR011011   Znf_FYVE_PHD       

SUPFAM

SSF52943   SSF52943        + More
SSF57903   SSF57903       

Gene 3D

1.10.20.10     3.30.40.10    

CDD

cd12151  F1-ATPase_gamma

ProteinModelPortal

H9J302   A0A2W1BPS2   A0A2A4JR52   A0A2A4JR83   A0A194PLV8   A0A194QZB7   + More
A0A2H1VKF2   A0A212EKD8   A0A0L7LA84   A0A091EGE1   U3IK89   F6SJM8   A0A1X7VD82   S9W3T2   Q1HPX4   K7P5E1   A0A0P6CI98   A0A2G9S1E0   A0A1D1ZG56   A0A2G9S1B1   U6DD18   A0A0P4VV79   R4FNB9   K7P534   T1HN70   L5LBI1   A0A1S3EKA9   A0A3L7I0Q9   A0A2I0T2W2   A0A3M6U7F3   F4WG50   F7F7L6   A0A1L1RPA5   L9KQG5   A0A023F8R4   A0A0C9QPL6   L5L0J2   G1NXI0   C1C3J8   A0A069DRH5   D6WPW7   G3TDA5   A0A341AG22   A0A2U4B6F4   S7NQV4   G3GR61   A0A2U3YCA8   K7P595   A0A0L7LUJ4   A0A2K6MWG2   A0A250YEF4   I4DJ96   S4NNE5   Q4R7P5   A0A2Y9HL94   R0LGI8   A0A2S2R2P5   D2I3D1   A0A1S3AFZ6   A0A2Y9HSU1   A0A2Y9R6L4   G1SM77   A0A2Y9H1B6   A0A0V0G371   A0A2U3ZDN1   B4DL14   A0A1L1RQ30   A0A212F7F8   A0A2U3V799   A0A340XXI4   A0A224XPP2   A0A1D5PXH6   A0A0K0DQ69   A0A2Y9NLH3   H0VH31   K9IZN0   A0A2Y9KRW5   A0A2U3V6X1   A0A340Y055   A0A2R7WX91   K9KF86   A0A341ABI7   A0A286XFY1   A0A2Y9NY33   A0A0N4TC37   A0A2K6D1F5   A0A2K6D1F4   A0A341ABQ1   A0A3Q0DE26   A0A2K6N6Z9   A0A3M0KGV2   A0A2K6FE13   A0A3Q0DL77   A0A2Y9KYQ2   A8Y2E9   A0A0A9Z7I7   E3N566   A0A261BUR5   A0A2K6N702   A0A026WWE4  

PDB

2W6J     E-value=4.45639e-25,     Score=277

KEGG

101742678    K02136 F-type H+-transporting ATPase subunit gamma | (RefSeq) ATP synthase subunit gamma, mitochondr

GO

GO:0046933   GO:0015986   GO:0045261   GO:0005669   GO:0046982   GO:0003743   GO:0046872   GO:0000275   GO:0006754   GO:0005753   GO:0006811   GO:0005216   GO:0006355   GO:0043565   GO:0003677   GO:0003707   GO:0004887   GO:0016021  

PANTHER

PTHR11693  

Length:

84

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.21793

Exp number, first 60 AAs:

1.21167

Total prob of N-in:

0.27193

outside

1  -  84

 

 

Pi

16.149616

Theta

27.403213

Tajima's D

-1.261734

CLR

0.451045

CSRT

0.0897455127243638

Interpretation

Uncertain